Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039A22.3 |
| Conread position: | 35-330 |
| Cow position: | chr3:67673711-67673416 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 202 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 50, 58 |
| Conread position: | 515-682 |
| Cow position: | chr3:62021836-62021662 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 518-680 |
| Cow position: | chr3:12613824-12613654 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 528-682 |
| Cow position: | chr3:28560856-28561012 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 11, 31 |
| Conread position: | 528-695 |
| Cow position: | chr3:83233590-83233425 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 41 |
| Conread position: | 530-695 |
| Cow position: | chr3:69187173-69187344 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 531-694 |
| Cow position: | chr3:14811334-14811491 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 55 |
| Conread position: | 535-682 |
| Cow position: | chr3:74227693-74227841 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 54, 31 |
| Conread position: | 535-778 |
| Cow position: | chr3:9431212-9431457 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 69, 49 |
| Conread position: | 536-682 |
| Cow position: | chr3:947040-947182 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 536-682 |
| Cow position: | chr3:15566466-15566613 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 536-682 |
| Cow position: | chr3:53193040-53193186 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 88 |
| Conread position: | 536-691 |
| Cow position: | chr3:53132455-53132605 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 536-695 |
| Cow position: | chr3:9631540-9631377 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 536-695 |
| Cow position: | chr3:52156298-52156460 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 31, 53 |
| Conread position: | 536-695 |
| Cow position: | chr3:53245943-53245781 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 536-695 |
| Cow position: | chr3:60284254-60284091 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 536-695 |
| Cow position: | chr3:75619014-75618860 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 536-698 |
| Cow position: | chr3:8529091-8528930 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 536-698 |
| Cow position: | chr3:26382332-26382170 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 67, 96 |
| Conread position: | 536-698 |
| Cow position: | chr3:29553043-29552880 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 536-698 |
| Cow position: | chr3:59577565-59577398 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 536-698 |
| Cow position: | chr3:64079704-64079539 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 61, 43 |
| Conread position: | 537-682 |
| Cow position: | chr3:33614488-33614635 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 537-696 |
| Cow position: | chr3:1022167-1022324 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 58, 35 |
| Conread position: | 537-696 |
| Cow position: | chr3:77776479-77776311 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 16, 127 |
| Conread position: | 538-682 |
| Cow position: | chr3:73154887-73155034 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 55, 133 |
| Conread position: | 538-695 |
| Cow position: | chr3:47471264-47471109 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 538-698 |
| Cow position: | chr3:38333525-38333360 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 540-695 |
| Cow position: | chr3:59628129-59627972 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 28 |
| Conread position: | 543-690 |
| Cow position: | chr3:52691222-52691367 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 543-698 |
| Cow position: | chr3:8440046-8440209 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 543-698 |
| Cow position: | chr3:72592866-72592719 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 547-698 |
| Cow position: | chr3:41734920-41735063 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 21 |
| Conread position: | 549-695 |
| Cow position: | chr3:39977018-39976873 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 92 |
| Conread position: | 551-698 |
| Cow position: | chr3:44898058-44898208 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 21 |
| Conread position: | 559-695 |
| Cow position: | chr3:44895777-44895639 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 41, 128 |
Show alignments to all cow chromosomes.