Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039A22.3 |
| Conread position: | 518-687 |
| Cow position: | chr9:8635423-8635599 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 522-682 |
| Cow position: | chr9:12851618-12851458 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 39, 15 |
| Conread position: | 533-698 |
| Cow position: | chr9:37256956-37256801 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 536-674 |
| Cow position: | chr9:44688740-44688600 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 29, 18 |
| Conread position: | 536-677 |
| Cow position: | chr9:35844048-35843907 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 40 |
| Conread position: | 536-681 |
| Cow position: | chr9:43482237-43482380 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 58, 50 |
| Conread position: | 536-682 |
| Cow position: | chr9:29001682-29001532 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 536-682 |
| Cow position: | chr9:53112836-53112988 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 536-693 |
| Cow position: | chr9:30056874-30056717 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 536-695 |
| Cow position: | chr9:10300831-10300992 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 536-695 |
| Cow position: | chr9:38755751-38755911 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 63, 102 |
| Conread position: | 536-695 |
| Cow position: | chr9:52422745-52422588 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 536-696 |
| Cow position: | chr9:45376020-45375850 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 536-697 |
| Cow position: | chr9:26520850-26521009 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 536-697 |
| Cow position: | chr9:33247708-33247871 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 48, 30 |
| Conread position: | 536-698 |
| Cow position: | chr9:1498966-1498800 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 536-698 |
| Cow position: | chr9:10577874-10577715 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 537-695 |
| Cow position: | chr9:24111916-24111762 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 67, 91 |
| Conread position: | 538-682 |
| Cow position: | chr9:43325295-43325443 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 115 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 539-698 |
| Cow position: | chr9:37516355-37516199 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 541-682 |
| Cow position: | chr9:55623581-55623431 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 542-698 |
| Cow position: | chr9:14047737-14047578 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 57, 50 |
| Conread position: | 543-686 |
| Cow position: | chr9:14863062-14862920 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 543-695 |
| Cow position: | chr9:29008237-29008392 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 543-695 |
| Cow position: | chr9:33278709-33278858 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 72 |
| Conread position: | 543-696 |
| Cow position: | chr9:32953793-32953636 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 122 |
| Conread position: | 543-698 |
| Cow position: | chr9:8752890-8752734 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 547-690 |
| Cow position: | chr9:38433268-38433122 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 561-695 |
| Cow position: | chr9:35599149-35599012 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 562-691 |
| Cow position: | chr9:58609778-58609648 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 35, 16 |
| Conread position: | 570-696 |
| Cow position: | chr9:36721639-36721508 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 574-695 |
| Cow position: | chr9:19502850-19502728 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 33, 64 |
Show alignments to all cow chromosomes.