Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039A22.3 |
| Conread position: | 527-695 |
| Cow position: | chrX:16953957-16953787 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 70, 52 |
| Conread position: | 528-698 |
| Cow position: | chrX:2766896-2767068 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 529-656 |
| Cow position: | chrX:28809762-28809637 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 8, 38 |
| Conread position: | 531-683 |
| Cow position: | chrX:23445191-23445034 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 7, 130 |
| Conread position: | 534-698 |
| Cow position: | chrX:37148525-37148687 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 69, 52 |
| Conread position: | 536-693 |
| Cow position: | chrX:11691887-11692045 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 56, 30 |
| Conread position: | 536-694 |
| Cow position: | chrX:4265081-4265243 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 536-695 |
| Cow position: | chrX:2060950-2060795 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 61, 104 |
| Conread position: | 536-695 |
| Cow position: | chrX:2874357-2874515 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 536-695 |
| Cow position: | chrX:3524103-3524264 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 536-695 |
| Cow position: | chrX:20875178-20875026 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 52, 79 |
| Conread position: | 536-695 |
| Cow position: | chrX:39353397-39353240 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 152, 11 |
| Conread position: | 536-696 |
| Cow position: | chrX:28127999-28128160 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 51, 96 |
| Conread position: | 536-697 |
| Cow position: | chrX:13035780-13035944 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 50 |
| Conread position: | 536-698 |
| Cow position: | chrX:7168215-7168378 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 536-698 |
| Cow position: | chrX:10257351-10257524 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 536-698 |
| Cow position: | chrX:16885556-16885720 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 86, 50 |
| Conread position: | 536-721 |
| Cow position: | chrX:21621808-21621611 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 25, 122 |
| Conread position: | 538-727 |
| Cow position: | chrX:36067257-36067061 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 541-682 |
| Cow position: | chrX:11791583-11791440 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 56, 38 |
| Conread position: | 544-695 |
| Cow position: | chrX:25306186-25306036 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 549-695 |
| Cow position: | chrX:22891180-22891031 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 139 |
| Conread position: | 564-685 |
| Cow position: | chrX:40552732-40552856 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
Show alignments to all cow chromosomes.