Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039A23.3
        

               Conread position:
               154-253
               

               Cow position:
               chr17:42516316-42516217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               252-362
               

               Cow position:
               chr17:42512220-42512110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               356-490
               

               Cow position:
               chr17:42508825-42508692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               125
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               112, 123
               

               Conread position:
               565-650
               

               Cow position:
               chr17:42507935-42507851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               86
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               649-840
               

               Cow position:
               chr17:42507289-42507098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               838-996
               

               Cow position:
               chr17:42506978-42506820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               146
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               977-1835
               

               Cow position:
               chr17:42506395-42505545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               875
               

               Alignm identity:
               725
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               567, 272
               
Show alignments to all cow chromosomes.