Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039H20.3 |
| Conread position: | 5-171 |
| Cow position: | chr28:118199-118029 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 32, 126 |
| Conread position: | 5-207 |
| Cow position: | chr28:18760194-18759985 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 117 |
| Conread position: | 5-233 |
| Cow position: | chr28:21363599-21363827 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 24, 126 |
| Conread position: | 7-337 |
| Cow position: | chr28:10589171-10588829 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 17-217 |
| Cow position: | chr28:8358775-8358968 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 28 |
| Conread position: | 17-338 |
| Cow position: | chr28:18934320-18934640 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 205 |
| Conread position: | 18-217 |
| Cow position: | chr28:18625100-18625305 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 78, 27 |
| Conread position: | 19-327 |
| Cow position: | chr28:12933862-12933542 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 26, 84 |
| Conread position: | 20-338 |
| Cow position: | chr28:19564357-19564029 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 52 |
| Conread position: | 23-182 |
| Cow position: | chr28:3105125-3105287 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 78, 127 |
| Conread position: | 24-179 |
| Cow position: | chr28:26269202-26269360 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 5, 102 |
| Conread position: | 24-337 |
| Cow position: | chr28:3492905-3492583 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 215 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 82, 19 |
| Conread position: | 25-265 |
| Cow position: | chr28:5166642-5166888 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 25-338 |
| Cow position: | chr28:25825997-25825678 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 14, 220 |
| Conread position: | 26-158 |
| Cow position: | chr28:22170836-22170701 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 75, 18 |
| Conread position: | 26-158 |
| Cow position: | chr28:26784585-26784455 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 18 |
| Conread position: | 26-162 |
| Cow position: | chr28:19394498-19394631 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 75, 18 |
| Conread position: | 26-171 |
| Cow position: | chr28:19024019-19024166 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 74, 45 |
| Conread position: | 26-193 |
| Cow position: | chr28:16252979-16252813 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 26-205 |
| Cow position: | chr28:18790895-18791070 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 85, 17 |
| Conread position: | 26-215 |
| Cow position: | chr28:10057710-10057518 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 19 |
| Conread position: | 26-217 |
| Cow position: | chr28:10529604-10529419 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 159, 18 |
| Conread position: | 26-217 |
| Cow position: | chr28:10745091-10745285 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 26-217 |
| Cow position: | chr28:21103963-21103757 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 26-217 |
| Cow position: | chr28:31110124-31109933 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 75, 18 |
| Conread position: | 26-219 |
| Cow position: | chr28:25283089-25283267 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 26-232 |
| Cow position: | chr28:26103592-26103790 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 77, 18 |
| Conread position: | 26-250 |
| Cow position: | chr28:11786831-11786618 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 153, 17 |
| Conread position: | 26-251 |
| Cow position: | chr28:1538050-1538261 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 19 |
| Conread position: | 26-251 |
| Cow position: | chr28:6059586-6059370 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 96, 19 |
| Conread position: | 26-251 |
| Cow position: | chr28:27161450-27161227 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 74, 97 |
| Conread position: | 26-262 |
| Cow position: | chr28:2752616-2752376 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 74, 27 |
| Conread position: | 26-262 |
| Cow position: | chr28:19079963-19079727 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 159, 17 |
| Conread position: | 26-268 |
| Cow position: | chr28:22321307-22321543 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 26-274 |
| Cow position: | chr28:4355430-4355676 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 52 |
| Conread position: | 26-314 |
| Cow position: | chr28:30303312-30303027 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 75, 22 |
| Conread position: | 26-323 |
| Cow position: | chr28:26743500-26743821 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 26-326 |
| Cow position: | chr28:26982861-26982543 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 26-334 |
| Cow position: | chr28:25563962-25564265 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 26-338 |
| Cow position: | chr28:21570070-21570362 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 75, 30 |
| Conread position: | 26-341 |
| Cow position: | chr28:3449181-3449517 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 75, 20 |
| Conread position: | 26-341 |
| Cow position: | chr28:4308027-4307685 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 26-341 |
| Cow position: | chr28:5144640-5144305 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 256 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 20, 39 |
| Conread position: | 26-352 |
| Cow position: | chr28:9099817-9100147 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 77, 17 |
| Conread position: | 26-353 |
| Cow position: | chr28:13267667-13267989 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 230 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 26-355 |
| Cow position: | chr28:5817724-5818059 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 131, 17 |
| Conread position: | 26-363 |
| Cow position: | chr28:30293709-30293373 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 20, 76 |
| Conread position: | 26-369 |
| Cow position: | chr28:7698099-7697744 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 17 |
| Conread position: | 26-372 |
| Cow position: | chr28:10845000-10845339 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 243 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 159, 17 |
| Conread position: | 26-376 |
| Cow position: | chr28:20313154-20313506 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 20 |
| Conread position: | 27-216 |
| Cow position: | chr28:12946828-12947019 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 74, 17 |
| Conread position: | 27-219 |
| Cow position: | chr28:15263837-15263645 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 73, 18 |
| Conread position: | 27-344 |
| Cow position: | chr28:23410444-23410120 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 17 |
| Conread position: | 27-352 |
| Cow position: | chr28:10616076-10615731 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 238 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 93, 42 |
| Conread position: | 28-159 |
| Cow position: | chr28:5838421-5838548 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 17 |
| Conread position: | 28-326 |
| Cow position: | chr28:20963652-20963354 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 20 |
| Conread position: | 28-346 |
| Cow position: | chr28:23460032-23460357 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 29-337 |
| Cow position: | chr28:10053453-10053128 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 239 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 17, 225 |
| Conread position: | 30-275 |
| Cow position: | chr28:2898881-2899120 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 101, 15 |
| Conread position: | 31-194 |
| Cow position: | chr28:17288101-17288260 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 94 |
| Conread position: | 31-341 |
| Cow position: | chr28:3011390-3011059 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 70, 171 |
| Conread position: | 31-341 |
| Cow position: | chr28:5826832-5827140 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 32-158 |
| Cow position: | chr28:7644332-7644462 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 32-217 |
| Cow position: | chr28:27218207-27218393 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 14, 89 |
| Conread position: | 32-262 |
| Cow position: | chr28:7372238-7372004 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 68, 80 |
| Conread position: | 32-362 |
| Cow position: | chr28:17601991-17601666 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 36, 94 |
| Conread position: | 33-201 |
| Cow position: | chr28:23447939-23447769 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 68, 79 |
| Conread position: | 33-269 |
| Cow position: | chr28:17398341-17398109 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 33-269 |
| Cow position: | chr28:17414582-17414350 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 33-336 |
| Cow position: | chr28:22813148-22813452 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 41 |
| Conread position: | 33-359 |
| Cow position: | chr28:5139114-5138773 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 34-346 |
| Cow position: | chr28:4881351-4881036 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 243 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 67, 86 |
| Conread position: | 35-169 |
| Cow position: | chr28:22739678-22739811 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 35-262 |
| Cow position: | chr28:34230118-34230346 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 150, 83 |
| Conread position: | 35-335 |
| Cow position: | chr28:24343257-24343555 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 212 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 66, 91 |
| Conread position: | 35-338 |
| Cow position: | chr28:4643877-4643564 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 149, 37 |
| Conread position: | 35-338 |
| Cow position: | chr28:23530756-23531068 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 208 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 100 |
| Conread position: | 35-338 |
| Cow position: | chr28:30746841-30746533 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 229 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 66, 84 |
| Conread position: | 35-363 |
| Cow position: | chr28:751117-751455 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 150, 66 |
| Conread position: | 35-365 |
| Cow position: | chr28:4282602-4282257 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 23 |
| Conread position: | 36-116 |
| Cow position: | chr28:11451575-11451494 (view UCSC Genome Browser custom track) |
| Alignm length: | 82 |
| Alignm identity: | 74 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 36-217 |
| Cow position: | chr28:7512700-7512513 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 10, 92 |
| Conread position: | 36-217 |
| Cow position: | chr28:9812171-9812349 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 149, 47 |
| Conread position: | 36-219 |
| Cow position: | chr28:25806459-25806646 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 10, 85 |
| Conread position: | 36-219 |
| Cow position: | chr28:26922480-26922295 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 10, 85 |
| Conread position: | 36-269 |
| Cow position: | chr28:18354436-18354208 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 10, 40 |
| Conread position: | 36-272 |
| Cow position: | chr28:2960944-2960709 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 40 |
| Conread position: | 36-323 |
| Cow position: | chr28:13865730-13866013 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 65, 85 |
| Conread position: | 36-329 |
| Cow position: | chr28:7268048-7267753 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 210 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 149, 42 |
| Conread position: | 36-335 |
| Cow position: | chr28:26614772-26615056 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 36-336 |
| Cow position: | chr28:3746093-3746400 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 145, 71 |
| Conread position: | 36-337 |
| Cow position: | chr28:11585317-11585005 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 68, 88 |
| Conread position: | 36-337 |
| Cow position: | chr28:19262700-19262380 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 222 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 93, 65 |
| Conread position: | 36-337 |
| Cow position: | chr28:21868343-21868661 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 68, 98 |
| Conread position: | 36-338 |
| Cow position: | chr28:5074622-5074315 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 86, 163 |
| Conread position: | 36-338 |
| Cow position: | chr28:9426462-9426147 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 36-338 |
| Cow position: | chr28:11346596-11346284 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 223 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 146, 73 |
| Conread position: | 36-338 |
| Cow position: | chr28:22571777-22571479 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 69, 47 |
| Conread position: | 36-338 |
| Cow position: | chr28:23724567-23724264 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 65 |
| Conread position: | 36-339 |
| Cow position: | chr28:23007846-23007536 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 213 |
| Conread position: | 36-343 |
| Cow position: | chr28:12951316-12951626 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 10, 83 |
| Conread position: | 36-344 |
| Cow position: | chr28:26719238-26719541 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 65 |
| Conread position: | 36-363 |
| Cow position: | chr28:8347618-8347964 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 241 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 11, 93 |
| Conread position: | 37-182 |
| Cow position: | chr28:25424412-25424262 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 37-183 |
| Cow position: | chr28:28903780-28903630 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 9, 102 |
| Conread position: | 37-217 |
| Cow position: | chr28:7501136-7500960 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 37-217 |
| Cow position: | chr28:31987500-31987685 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 37-219 |
| Cow position: | chr28:8408622-8408807 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 37-230 |
| Cow position: | chr28:21380766-21380967 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 37-261 |
| Cow position: | chr28:1632768-1632540 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 9, 88 |
| Conread position: | 37-261 |
| Cow position: | chr28:21355112-21355348 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 64, 112 |
| Conread position: | 37-265 |
| Cow position: | chr28:25728087-25728310 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 37-269 |
| Cow position: | chr28:8022221-8021984 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 64, 175 |
| Conread position: | 37-269 |
| Cow position: | chr28:33051917-33052161 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 63, 89 |
| Conread position: | 37-278 |
| Cow position: | chr28:19026124-19025883 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 9, 191 |
| Conread position: | 37-335 |
| Cow position: | chr28:3078792-3078494 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 37-335 |
| Cow position: | chr28:34430533-34430221 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 72, 94 |
| Conread position: | 37-336 |
| Cow position: | chr28:33285225-33284925 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 37-338 |
| Cow position: | chr28:16085212-16085525 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 229 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 9, 51 |
| Conread position: | 37-338 |
| Cow position: | chr28:23296212-23296524 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 213 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 37-338 |
| Cow position: | chr28:25249242-25249540 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 69, 85 |
| Conread position: | 37-339 |
| Cow position: | chr28:18139564-18139267 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 145, 39 |
| Conread position: | 37-346 |
| Cow position: | chr28:12672572-12672248 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 64, 31 |
| Conread position: | 37-346 |
| Cow position: | chr28:23676028-23676326 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 9, 80 |
| Conread position: | 37-351 |
| Cow position: | chr28:3484465-3484804 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 240 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 9, 127 |
| Conread position: | 37-352 |
| Cow position: | chr28:616272-616588 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 91 |
| Conread position: | 37-357 |
| Cow position: | chr28:5193208-5193546 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 244 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 9, 196 |
| Conread position: | 37-364 |
| Cow position: | chr28:11866777-11866439 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 9, 35 |
| Conread position: | 37-375 |
| Cow position: | chr28:11884632-11884292 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 87 |
| Conread position: | 38-156 |
| Cow position: | chr28:9390475-9390357 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 38-231 |
| Cow position: | chr28:2862753-2862955 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 65 |
| Conread position: | 38-251 |
| Cow position: | chr28:13176787-13176589 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 38-252 |
| Cow position: | chr28:4057871-4058089 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 88 |
| Conread position: | 38-299 |
| Cow position: | chr28:31648962-31649238 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 158 |
| Conread position: | 38-325 |
| Cow position: | chr28:32174519-32174797 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 63, 82 |
| Conread position: | 38-336 |
| Cow position: | chr28:10606739-10606434 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 8, 83 |
| Conread position: | 38-336 |
| Cow position: | chr28:23793415-23793117 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 144, 43 |
| Conread position: | 39-217 |
| Cow position: | chr28:34878079-34877909 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 62, 96 |
| Conread position: | 39-269 |
| Cow position: | chr28:29434535-29434303 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 7, 45 |
| Conread position: | 39-278 |
| Cow position: | chr28:26685004-26685256 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 7, 128 |
| Conread position: | 39-325 |
| Cow position: | chr28:18370118-18369821 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 7, 82 |
| Conread position: | 39-338 |
| Cow position: | chr28:7009086-7008776 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 61, 81 |
| Conread position: | 39-360 |
| Cow position: | chr28:21502286-21502610 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 41-278 |
| Cow position: | chr28:28766007-28765777 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 6, 16 |
| Conread position: | 44-180 |
| Cow position: | chr28:25459424-25459564 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 45-163 |
| Cow position: | chr28:23840098-23840217 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 82 |
| Conread position: | 45-217 |
| Cow position: | chr28:11818066-11817896 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 140, 34 |
| Conread position: | 45-232 |
| Cow position: | chr28:5792603-5792796 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 56, 86 |
| Conread position: | 45-233 |
| Cow position: | chr28:26055372-26055567 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 45-237 |
| Cow position: | chr28:12363264-12363065 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 42, 76 |
| Conread position: | 45-271 |
| Cow position: | chr28:15601172-15601401 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 56, 90 |
| Conread position: | 45-335 |
| Cow position: | chr28:7865221-7865507 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 78 |
| Conread position: | 45-338 |
| Cow position: | chr28:14997961-14998268 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 61, 212 |
| Conread position: | 45-338 |
| Cow position: | chr28:20409289-20409597 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 55, 36 |
| Conread position: | 45-364 |
| Cow position: | chr28:6358513-6358177 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 95, 103 |
| Conread position: | 46-233 |
| Cow position: | chr28:13607783-13607986 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 46-257 |
| Cow position: | chr28:15043964-15043749 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 72 |
| Conread position: | 46-268 |
| Cow position: | chr28:7549162-7548936 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 54, 77 |
| Conread position: | 46-302 |
| Cow position: | chr28:3408310-3408053 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 5, 54 |
| Conread position: | 46-312 |
| Cow position: | chr28:21598356-21598091 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 201 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 55, 81 |
| Conread position: | 46-323 |
| Cow position: | chr28:3914609-3914895 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 213 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 59, 214 |
| Conread position: | 46-335 |
| Cow position: | chr28:2132025-2131740 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 134, 42 |
| Conread position: | 46-335 |
| Cow position: | chr28:9285476-9285175 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 55, 145 |
| Conread position: | 46-337 |
| Cow position: | chr28:5204090-5204389 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 63, 256 |
| Conread position: | 46-338 |
| Cow position: | chr28:30327193-30326896 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 83 |
| Conread position: | 46-338 |
| Cow position: | chr28:30937765-30937478 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 42 |
| Conread position: | 46-338 |
| Cow position: | chr28:34248125-34247838 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 137, 49 |
| Conread position: | 46-351 |
| Cow position: | chr28:20124681-20124999 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 55, 68 |
| Conread position: | 46-357 |
| Cow position: | chr28:5437190-5436863 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 229 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 56, 78 |
| Conread position: | 46-362 |
| Cow position: | chr28:9740364-9740683 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 134, 43 |
| Conread position: | 47-217 |
| Cow position: | chr28:17071232-17071408 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 47-340 |
| Cow position: | chr28:33163565-33163270 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 54, 73 |
| Conread position: | 47-345 |
| Cow position: | chr28:29416814-29416513 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 143, 14 |
| Conread position: | 47-359 |
| Cow position: | chr28:5931252-5931568 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 53, 21 |
| Conread position: | 47-376 |
| Cow position: | chr28:6091262-6091599 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 48-252 |
| Cow position: | chr28:18186454-18186657 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 96 |
| Conread position: | 48-278 |
| Cow position: | chr28:19222250-19222016 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 53, 40 |
| Conread position: | 48-337 |
| Cow position: | chr28:11426642-11426344 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 50-337 |
| Cow position: | chr28:662010-662304 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 133, 76 |
| Conread position: | 53-262 |
| Cow position: | chr28:30865325-30865535 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 48, 18 |
| Conread position: | 54-232 |
| Cow position: | chr28:5297187-5297366 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 49, 41 |
| Conread position: | 54-262 |
| Cow position: | chr28:7388861-7388654 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 56-343 |
| Cow position: | chr28:3143979-3143675 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 57-268 |
| Cow position: | chr28:8147953-8147740 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 44, 63 |
| Conread position: | 58-278 |
| Cow position: | chr28:11559724-11559498 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 43, 25 |
| Conread position: | 58-342 |
| Cow position: | chr28:2279680-2279395 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 22, 63 |
| Conread position: | 60-338 |
| Cow position: | chr28:32365754-32366024 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 213 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 41, 68 |
| Conread position: | 61-337 |
| Cow position: | chr28:7540247-7539971 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 40, 64 |
| Conread position: | 61-355 |
| Cow position: | chr28:1202327-1202044 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 44, 8 |
| Conread position: | 65-326 |
| Cow position: | chr28:4045769-4046037 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 120, 35 |
| Conread position: | 68-345 |
| Cow position: | chr28:8291344-8291624 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 207 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 33, 103 |
| Conread position: | 70-219 |
| Cow position: | chr28:3161032-3160880 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 33, 57 |
| Conread position: | 71-346 |
| Cow position: | chr28:11815156-11814866 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 30, 57 |
| Conread position: | 71-351 |
| Cow position: | chr28:24966307-24966605 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 35, 48 |
| Conread position: | 72-367 |
| Cow position: | chr28:7156764-7157053 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 113, 28 |
| Conread position: | 73-337 |
| Cow position: | chr28:9636532-9636253 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 108, 29 |
| Conread position: | 78-366 |
| Cow position: | chr28:17012362-17012072 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 27, 43 |
| Conread position: | 79-323 |
| Cow position: | chr28:20397438-20397176 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 12 |
| Conread position: | 79-338 |
| Cow position: | chr28:31166055-31165794 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 145 |
| Conread position: | 84-262 |
| Cow position: | chr28:4765611-4765794 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 85-351 |
| Cow position: | chr28:7619214-7618942 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 48, 36 |
| Conread position: | 89-268 |
| Cow position: | chr28:4873408-4873221 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 100-363 |
| Cow position: | chr28:5235835-5236103 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 85, 17 |
| Conread position: | 110-335 |
| Cow position: | chr28:2762156-2762374 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 70, 8 |
| Conread position: | 110-338 |
| Cow position: | chr28:9294532-9294306 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 73, 36 |
| Conread position: | 114-334 |
| Cow position: | chr28:6975205-6975435 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 24, 7 |
| Conread position: | 121-338 |
| Cow position: | chr28:19216791-19217018 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 10, 128 |
| Conread position: | 125-364 |
| Cow position: | chr28:11059476-11059722 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 66, 41 |
| Conread position: | 126-336 |
| Cow position: | chr28:23047594-23047797 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 94 |
| Conread position: | 126-337 |
| Cow position: | chr28:21008690-21008467 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 5, 79 |
| Conread position: | 126-338 |
| Cow position: | chr28:7964692-7964473 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 40 |
| Conread position: | 126-339 |
| Cow position: | chr28:26372717-26372927 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 127-338 |
| Cow position: | chr28:4013061-4013289 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 129-365 |
| Cow position: | chr28:21207387-21207141 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 54, 12 |
| Conread position: | 138-337 |
| Cow position: | chr28:15362567-15362782 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 49, 123 |
| Conread position: | 138-337 |
| Cow position: | chr28:29850827-29850618 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 177 |
| Conread position: | 141-338 |
| Cow position: | chr28:16214882-16214679 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 44, 102 |
| Conread position: | 141-385 |
| Cow position: | chr28:18797311-18797555 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 46, 88 |
| Conread position: | 148-337 |
| Cow position: | chr28:26784243-26784052 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 37, 92 |
| Conread position: | 148-356 |
| Cow position: | chr28:11411538-11411315 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 148-382 |
| Cow position: | chr28:17728101-17727859 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 70, 211 |
| Conread position: | 157-346 |
| Cow position: | chr28:20046560-20046757 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 49 |
| Conread position: | 168-339 |
| Cow position: | chr28:13269749-13269925 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 168-341 |
| Cow position: | chr28:8681408-8681228 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 187-360 |
| Cow position: | chr28:16767555-16767381 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 67, 30 |
| Conread position: | 190-361 |
| Cow position: | chr28:8616876-8617046 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 34, 78 |
| Conread position: | 683-803 |
| Cow position: | chr28:7595123-7595247 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 696-794 |
| Cow position: | chr28:4404222-4404121 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 86 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 696-803 |
| Cow position: | chr28:15993791-15993684 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 25, 47 |
Show alignments to all cow chromosomes.