Cow genome map

Conread name: Ss1.1-Pig4-TMW8039L17.3

Conread position: 89-244
Cow position: chr14:8930230-8930383 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 53, 9

Conread position: 103-247
Cow position: chr14:2975271-2975127 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 39, 112

Conread position: 109-247
Cow position: chr14:8923766-8923627 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 59

Conread position: 116-234
Cow position: chr14:27044965-27044842 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 117-247
Cow position: chr14:12137850-12137974 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 18, 0

Conread position: 120-224
Cow position: chr14:36289959-36289852 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 120-240
Cow position: chr14:15518573-15518450 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 105
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 120-244
Cow position: chr14:5668292-5668164 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 120-247
Cow position: chr14:7036528-7036400 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 121-243
Cow position: chr14:28304954-28304831 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 121-245
Cow position: chr14:8027734-8027605 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 121-247
Cow position: chr14:5044508-5044628 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 33

Conread position: 121-247
Cow position: chr14:12244549-12244428 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 105
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 21, 82

Conread position: 121-247
Cow position: chr14:13006356-13006484 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 121-247
Cow position: chr14:20016879-20016750 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 121-247
Cow position: chr14:21081664-21081791 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 122-247
Cow position: chr14:28378191-28378316 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 56

Conread position: 122-248
Cow position: chr14:37504346-37504473 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 124-228
Cow position: chr14:13176596-13176489 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 124-247
Cow position: chr14:11470316-11470191 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 106

Conread position: 124-247
Cow position: chr14:14393718-14393839 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 29

Conread position: 124-247
Cow position: chr14:15944832-15944706 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 124-247
Cow position: chr14:18270194-18270318 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 13, 75

Conread position: 124-247
Cow position: chr14:18412760-18412634 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 124-247
Cow position: chr14:30023366-30023240 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 124-247
Cow position: chr14:35381423-35381549 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 0

Conread position: 124-247
Cow position: chr14:36723242-36723367 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 124-285
Cow position: chr14:6389049-6388889 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 30

Conread position: 125-232
Cow position: chr14:25235442-25235334 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 87
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 125-234
Cow position: chr14:42080080-42079969 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 125-235
Cow position: chr14:49817849-49817740 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 88

Conread position: 125-241
Cow position: chr14:23100449-23100566 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 10, 23

Conread position: 125-243
Cow position: chr14:27364413-27364533 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 104
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 125-244
Cow position: chr14:25284833-25284952 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 34

Conread position: 125-244
Cow position: chr14:26115895-26116016 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 17, 0

Conread position: 125-244
Cow position: chr14:37236209-37236324 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 125-245
Cow position: chr14:10937507-10937628 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 125-246
Cow position: chr14:44713252-44713375 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 125-246
Cow position: chr14:48884992-48884868 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 125-247
Cow position: chr14:8083032-8083155 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 104

Conread position: 125-247
Cow position: chr14:11981300-11981424 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 125-247
Cow position: chr14:13385202-13385325 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 10, 104

Conread position: 125-247
Cow position: chr14:15428315-15428435 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 65

Conread position: 125-247
Cow position: chr14:23078955-23078835 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 78

Conread position: 125-247
Cow position: chr14:25517111-25516988 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 10, 109

Conread position: 125-247
Cow position: chr14:45955124-45955248 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 107
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 126-242
Cow position: chr14:41755994-41756111 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 126-242
Cow position: chr14:45076982-45077099 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 95

Conread position: 126-247
Cow position: chr14:31342047-31342169 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 126-247
Cow position: chr14:38144273-38144150 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 126-349
Cow position: chr14:41871749-41871531 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 152, 15

Conread position: 127-236
Cow position: chr14:5556096-5556205 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 37

Conread position: 129-241
Cow position: chr14:12071688-12071573 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 129-241
Cow position: chr14:22231067-22230957 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 12, 87

Conread position: 129-242
Cow position: chr14:12081285-12081173 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 97
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 77

Conread position: 129-245
Cow position: chr14:34775908-34775791 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 100
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 129-247
Cow position: chr14:29592875-29592755 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 132-243
Cow position: chr14:36559382-36559273 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 37

Conread position: 132-243
Cow position: chr14:39795466-39795572 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 71

Conread position: 132-244
Cow position: chr14:19988218-19988105 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 132-244
Cow position: chr14:33457201-33457089 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 88

Conread position: 132-245
Cow position: chr14:7198339-7198453 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 132-245
Cow position: chr14:16770024-16769910 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 132-245
Cow position: chr14:28987533-28987648 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 132-245
Cow position: chr14:29282596-29282710 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 99
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 132-245
Cow position: chr14:29964861-29964975 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 132-245
Cow position: chr14:33229556-33229445 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 88

Conread position: 132-247
Cow position: chr14:7342309-7342420 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 20

Conread position: 132-247
Cow position: chr14:12142072-12141957 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 100

Conread position: 132-247
Cow position: chr14:23419637-23419753 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 132-247
Cow position: chr14:27653005-27653121 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 132-247
Cow position: chr14:35421243-35421126 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 90

Conread position: 132-247
Cow position: chr14:36443173-36443061 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 83

Conread position: 132-250
Cow position: chr14:1803275-1803157 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 44

Conread position: 133-245
Cow position: chr14:18941443-18941330 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 134-236
Cow position: chr14:19924186-19924082 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 134-245
Cow position: chr14:10920722-10920608 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 134-246
Cow position: chr14:39097350-39097463 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 134-247
Cow position: chr14:27823278-27823389 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 18

Conread position: 134-247
Cow position: chr14:28924011-28924125 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 134-247
Cow position: chr14:40230789-40230678 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 31

Conread position: 140-247
Cow position: chr14:10693404-10693297 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 140-247
Cow position: chr14:40347789-40347686 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 96
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 141-245
Cow position: chr14:1708805-1708701 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 141-247
Cow position: chr14:48496293-48496187 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 142-243
Cow position: chr14:28803864-28803763 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 83
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 142-247
Cow position: chr14:24543720-24543614 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 142-247
Cow position: chr14:50472347-50472243 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 142-284
Cow position: chr14:41706568-41706428 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 129, 104

Conread position: 144-247
Cow position: chr14:44649163-44649266 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 147-247
Cow position: chr14:13516132-13516032 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.