Cow genome map

Conread name: Ss1.1-Pig4-TMW8039L17.3

Conread position: 80-245
Cow position: chr19:51294040-51294212 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 44, 14

Conread position: 93-245
Cow position: chr19:41718734-41718888 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 141

Conread position: 94-245
Cow position: chr19:32437681-32437831 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 48, 37

Conread position: 95-247
Cow position: chr19:13439699-13439545 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 8

Conread position: 113-244
Cow position: chr19:43190136-43190001 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 115-247
Cow position: chr19:2589719-2589589 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 50

Conread position: 118-242
Cow position: chr19:30007385-30007264 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 24, 14

Conread position: 120-244
Cow position: chr19:12497206-12497080 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 120-245
Cow position: chr19:6478112-6477984 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 9, 54

Conread position: 120-246
Cow position: chr19:7558745-7558618 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 106
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 120-247
Cow position: chr19:2220873-2221001 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 120-247
Cow position: chr19:8185405-8185277 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 110
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 13, 97

Conread position: 120-247
Cow position: chr19:43413979-43413857 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 9, 94

Conread position: 121-243
Cow position: chr19:1791494-1791620 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 121-245
Cow position: chr19:8864943-8864817 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 124

Conread position: 121-245
Cow position: chr19:20622856-20622730 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 8, 57

Conread position: 121-245
Cow position: chr19:30917743-30917868 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 14, 75

Conread position: 121-245
Cow position: chr19:33655090-33654966 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 14, 40

Conread position: 121-247
Cow position: chr19:38111666-38111539 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 86

Conread position: 121-254
Cow position: chr19:12801345-12801479 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 76

Conread position: 122-205
Cow position: chr19:13267009-13267093 (view UCSC Genome Browser custom track)
Alignm length: 85
Alignm identity: 75
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 122-244
Cow position: chr19:8603538-8603412 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 122-247
Cow position: chr19:5912757-5912886 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 14, 0

Conread position: 122-247
Cow position: chr19:20941472-20941345 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 122-247
Cow position: chr19:25041048-25041173 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 20, 29

Conread position: 122-247
Cow position: chr19:38411067-38410942 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 13, 45

Conread position: 123-245
Cow position: chr19:42776630-42776507 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 123-247
Cow position: chr19:41946913-41946794 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 123-247
Cow position: chr19:42217114-42217242 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 13, 75

Conread position: 124-246
Cow position: chr19:21244024-21244140 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 124-247
Cow position: chr19:4586354-4586473 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 18, 83

Conread position: 124-247
Cow position: chr19:52356447-52356326 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 18, 95

Conread position: 124-248
Cow position: chr19:43292530-43292406 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 114

Conread position: 125-240
Cow position: chr19:17355053-17354937 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 102
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 125-242
Cow position: chr19:7794845-7794727 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 106

Conread position: 125-244
Cow position: chr19:23831543-23831420 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 125-245
Cow position: chr19:10755495-10755378 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 17, 73

Conread position: 125-245
Cow position: chr19:19738199-19738076 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 125-245
Cow position: chr19:41497448-41497570 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 125-246
Cow position: chr19:12760905-12761028 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 10, 0

Conread position: 125-246
Cow position: chr19:14588600-14588480 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 39

Conread position: 125-246
Cow position: chr19:35072855-35072978 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 9, 92

Conread position: 125-247
Cow position: chr19:44040-43917 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 83

Conread position: 125-247
Cow position: chr19:729553-729673 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 107
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 10, 35

Conread position: 125-247
Cow position: chr19:11211078-11211204 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 125-247
Cow position: chr19:12714297-12714174 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 92

Conread position: 125-247
Cow position: chr19:33610084-33609963 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 95

Conread position: 125-247
Cow position: chr19:38021638-38021513 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 125-247
Cow position: chr19:55742086-55742211 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 125-291
Cow position: chr19:4328678-4328846 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 68

Conread position: 126-247
Cow position: chr19:15969868-15969745 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 126-247
Cow position: chr19:24068087-24068210 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 129-241
Cow position: chr19:12945114-12945226 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 55

Conread position: 129-242
Cow position: chr19:31763686-31763574 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 50

Conread position: 129-244
Cow position: chr19:6687809-6687926 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 85, 7

Conread position: 130-247
Cow position: chr19:30227711-30227594 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 12, 19

Conread position: 132-231
Cow position: chr19:47727452-47727552 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 132-241
Cow position: chr19:14253822-14253712 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 93
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 132-241
Cow position: chr19:17676827-17676716 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 132-242
Cow position: chr19:55392110-55392221 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 132-243
Cow position: chr19:12747590-12747698 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 27

Conread position: 132-244
Cow position: chr19:51620990-51621103 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 132-245
Cow position: chr19:19468573-19468460 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 94
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 10, 88

Conread position: 132-245
Cow position: chr19:31729453-31729339 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 132-247
Cow position: chr19:16686795-16686910 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 44

Conread position: 132-247
Cow position: chr19:24137452-24137342 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 27

Conread position: 132-247
Cow position: chr19:29139392-29139276 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 132-247
Cow position: chr19:35246132-35246016 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 98
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 132-247
Cow position: chr19:38637597-38637713 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 101
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 132-247
Cow position: chr19:39758708-39758595 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 97
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 10, 20

Conread position: 132-247
Cow position: chr19:42544717-42544602 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 10, 88

Conread position: 132-247
Cow position: chr19:48729045-48729159 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 82

Conread position: 132-247
Cow position: chr19:49290271-49290383 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 97
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 10, 81

Conread position: 132-247
Cow position: chr19:49959056-49958944 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 134-247
Cow position: chr19:54105641-54105527 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 135-247
Cow position: chr19:34166552-34166441 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 97
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 38

Conread position: 135-247
Cow position: chr19:36191436-36191323 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 94
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 138-245
Cow position: chr19:23416700-23416807 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 138-248
Cow position: chr19:53245799-53245692 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 141-246
Cow position: chr19:33978650-33978753 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 91
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 141-247
Cow position: chr19:35623570-35623461 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 142-246
Cow position: chr19:18515863-18515758 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 142-247
Cow position: chr19:21817142-21817037 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 85
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 143-245
Cow position: chr19:24453333-24453435 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 143-245
Cow position: chr19:55590410-55590308 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 143-247
Cow position: chr19:24220331-24220433 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 0

Conread position: 144-245
Cow position: chr19:42868192-42868091 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 144-252
Cow position: chr19:24444167-24444062 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 146-246
Cow position: chr19:40650957-40650858 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 87
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 155-247
Cow position: chr19:4281292-4281384 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 80
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.