Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039L17.3 |
| Conread position: | 104-245 |
| Cow position: | chr26:2701742-2701883 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 38, 116 |
| Conread position: | 104-247 |
| Cow position: | chr26:4584972-4585111 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 26 |
| Conread position: | 104-253 |
| Cow position: | chr26:26407548-26407693 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 33 |
| Conread position: | 113-231 |
| Cow position: | chr26:31205323-31205199 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 119-247 |
| Cow position: | chr26:10608802-10608680 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 120-244 |
| Cow position: | chr26:19146131-19146004 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 121-245 |
| Cow position: | chr26:16423819-16423696 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 88 |
| Conread position: | 121-245 |
| Cow position: | chr26:21418227-21418353 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 120 |
| Conread position: | 122-247 |
| Cow position: | chr26:2930032-2930157 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 122-247 |
| Cow position: | chr26:16166467-16166593 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 16, 41 |
| Conread position: | 122-247 |
| Cow position: | chr26:27768494-27768369 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 11, 32 |
| Conread position: | 123-245 |
| Cow position: | chr26:135468-135591 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 124-241 |
| Cow position: | chr26:30955369-30955253 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 61 |
| Conread position: | 124-243 |
| Cow position: | chr26:35530473-35530351 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 124-246 |
| Cow position: | chr26:9662005-9662129 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 124-247 |
| Cow position: | chr26:27482338-27482464 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 124-247 |
| Cow position: | chr26:34026810-34026935 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 124-309 |
| Cow position: | chr26:10740020-10740212 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 18, 134 |
| Conread position: | 125-243 |
| Cow position: | chr26:7148077-7148199 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 112 |
| Conread position: | 125-243 |
| Cow position: | chr26:25663326-25663446 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 125-245 |
| Cow position: | chr26:6714077-6714198 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 125-246 |
| Cow position: | chr26:8811354-8811230 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 125-246 |
| Cow position: | chr26:16797744-16797864 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 10, 97 |
| Conread position: | 125-246 |
| Cow position: | chr26:31711842-31711965 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 125-247 |
| Cow position: | chr26:4854765-4854646 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 125-247 |
| Cow position: | chr26:15908539-15908662 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 125-247 |
| Cow position: | chr26:33253095-33253214 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 74 |
| Conread position: | 125-247 |
| Cow position: | chr26:33475922-33475798 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 126-246 |
| Cow position: | chr26:12028015-12028134 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 127-245 |
| Cow position: | chr26:32830303-32830184 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 129-243 |
| Cow position: | chr26:11672518-11672403 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 129-245 |
| Cow position: | chr26:4167132-4167250 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 129-246 |
| Cow position: | chr26:31633949-31633831 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 132-239 |
| Cow position: | chr26:3930316-3930424 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 87 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 132-244 |
| Cow position: | chr26:8811689-8811576 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 132-244 |
| Cow position: | chr26:10764429-10764317 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 100 |
| Conread position: | 132-244 |
| Cow position: | chr26:35678063-35677946 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 132-245 |
| Cow position: | chr26:1041217-1041103 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 132-245 |
| Cow position: | chr26:34114479-34114366 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 10, 94 |
| Conread position: | 132-247 |
| Cow position: | chr26:5407194-5407081 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 132-247 |
| Cow position: | chr26:23096978-23097092 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 12, 69 |
| Conread position: | 132-247 |
| Cow position: | chr26:25029751-25029635 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 133-242 |
| Cow position: | chr26:6741533-6741643 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 92 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 134-245 |
| Cow position: | chr26:33837645-33837757 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 134-247 |
| Cow position: | chr26:4807770-4807656 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 134-247 |
| Cow position: | chr26:26919749-26919635 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 134-247 |
| Cow position: | chr26:31173485-31173371 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 135-236 |
| Cow position: | chr26:19671689-19671587 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 140-245 |
| Cow position: | chr26:16801191-16801085 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 141-245 |
| Cow position: | chr26:28244036-28243933 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 89 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 142-243 |
| Cow position: | chr26:9501913-9501814 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 85 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 142-247 |
| Cow position: | chr26:7085557-7085662 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.