Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039L17.3
        

               Conread position:
               78-246
               

               Cow position:
               chr3:15153916-15153753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 20
               

               Conread position:
               92-245
               

               Cow position:
               chr3:53604528-53604683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 20
               

               Conread position:
               93-247
               

               Cow position:
               chr3:78115373-78115532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               103-241
               

               Cow position:
               chr3:70333766-70333905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               16, 30
               

               Conread position:
               105-246
               

               Cow position:
               chr3:11253962-11254106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               106-223
               

               Cow position:
               chr3:45183618-45183739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               106-245
               

               Cow position:
               chr3:72626542-72626683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               107-247
               

               Cow position:
               chr3:32436838-32436696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               26, 5
               

               Conread position:
               108-262
               

               Cow position:
               chr3:44415373-44415527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               113-244
               

               Cow position:
               chr3:80958316-80958448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               114-244
               

               Cow position:
               chr3:52147248-52147380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               117-247
               

               Cow position:
               chr3:20065959-20066089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               118-234
               

               Cow position:
               chr3:29386057-29385940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               99
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               118-245
               

               Cow position:
               chr3:33318-33448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               120-229
               

               Cow position:
               chr3:67519990-67520098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               22, 87
               

               Conread position:
               120-247
               

               Cow position:
               chr3:3453772-3453640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               120-247
               

               Cow position:
               chr3:58527564-58527443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 88
               

               Conread position:
               121-223
               

               Cow position:
               chr3:33460412-33460517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               121-241
               

               Cow position:
               chr3:79893311-79893431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 99
               

               Conread position:
               121-243
               

               Cow position:
               chr3:7408626-7408500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               121-243
               

               Cow position:
               chr3:60371171-60371047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 55
               

               Conread position:
               121-243
               

               Cow position:
               chr3:75966597-75966716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 84
               

               Conread position:
               121-244
               

               Cow position:
               chr3:24304440-24304570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               121-245
               

               Cow position:
               chr3:11027464-11027337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               121-245
               

               Cow position:
               chr3:31555122-31554996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               12, 103
               

               Conread position:
               121-245
               

               Cow position:
               chr3:35883747-35883872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               121-245
               

               Cow position:
               chr3:63860424-63860548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               99
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               14, 82
               

               Conread position:
               121-247
               

               Cow position:
               chr3:18059891-18059764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 88
               

               Conread position:
               121-247
               

               Cow position:
               chr3:65058884-65058759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 97
               

               Conread position:
               121-247
               

               Cow position:
               chr3:83215454-83215323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               121-251
               

               Cow position:
               chr3:23203045-23203175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               122-246
               

               Cow position:
               chr3:29944046-29943918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               122-247
               

               Cow position:
               chr3:3556732-3556606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               122-261
               

               Cow position:
               chr3:55972899-55973029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               123-223
               

               Cow position:
               chr3:72910889-72910993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               123-241
               

               Cow position:
               chr3:1011675-1011555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               22, 112
               

               Conread position:
               123-243
               

               Cow position:
               chr3:56678166-56678285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               123-245
               

               Cow position:
               chr3:43388942-43389065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               123-245
               

               Cow position:
               chr3:55730282-55730406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               106
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               123-247
               

               Cow position:
               chr3:76056104-76056224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               13, 85
               

               Conread position:
               124-233
               

               Cow position:
               chr3:52499013-52499124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               124-242
               

               Cow position:
               chr3:14558939-14558823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               124-247
               

               Cow position:
               chr3:210506-210380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               124-247
               

               Cow position:
               chr3:47198943-47199066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               124-247
               

               Cow position:
               chr3:70632326-70632205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               125-230
               

               Cow position:
               chr3:10454027-10453919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-241
               

               Cow position:
               chr3:55318716-55318832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               10, 96
               

               Conread position:
               125-241
               

               Cow position:
               chr3:59997936-59997817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-243
               

               Cow position:
               chr3:44960127-44960007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-244
               

               Cow position:
               chr3:72342431-72342309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-244
               

               Cow position:
               chr3:76172500-76172627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-244
               

               Cow position:
               chr3:77188621-77188502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               17, 95
               

               Conread position:
               125-244
               

               Cow position:
               chr3:84137632-84137751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               10, 74
               

               Conread position:
               125-245
               

               Cow position:
               chr3:18067314-18067195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               125-245
               

               Cow position:
               chr3:29946568-29946450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 26
               

               Conread position:
               125-245
               

               Cow position:
               chr3:44218950-44218828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-245
               

               Cow position:
               chr3:79877212-79877089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               125-246
               

               Cow position:
               chr3:35624361-35624483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 118
               

               Conread position:
               125-246
               

               Cow position:
               chr3:42355846-42355726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 28
               

               Conread position:
               125-246
               

               Cow position:
               chr3:48468358-48468235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               125-246
               

               Cow position:
               chr3:49482532-49482654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               125-246
               

               Cow position:
               chr3:59391943-59392066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               125-247
               

               Cow position:
               chr3:3656698-3656575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               127
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               13, 36
               

               Conread position:
               125-247
               

               Cow position:
               chr3:5703357-5703234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               125-247
               

               Cow position:
               chr3:6728139-6728269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               125-247
               

               Cow position:
               chr3:9025903-9026026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               39, 10
               

               Conread position:
               125-247
               

               Cow position:
               chr3:18699926-18700050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               125-247
               

               Cow position:
               chr3:41366518-41366649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               125-247
               

               Cow position:
               chr3:58452227-58452103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               125-247
               

               Cow position:
               chr3:58497843-58497718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               125-247
               

               Cow position:
               chr3:58562882-58562759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 96
               

               Conread position:
               125-247
               

               Cow position:
               chr3:59317882-59317761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               10, 91
               

               Conread position:
               125-247
               

               Cow position:
               chr3:59947850-59947726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               125-247
               

               Cow position:
               chr3:60186330-60186210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               125-247
               

               Cow position:
               chr3:65237204-65237085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               15, 90
               

               Conread position:
               125-247
               

               Cow position:
               chr3:71231579-71231456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               125-247
               

               Cow position:
               chr3:76300955-76300832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               125-247
               

               Cow position:
               chr3:79398327-79398203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               125-247
               

               Cow position:
               chr3:83889431-83889307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               126-242
               

               Cow position:
               chr3:13882337-13882456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               97
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               126-246
               

               Cow position:
               chr3:14801925-14801806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 34
               

               Conread position:
               126-247
               

               Cow position:
               chr3:59681727-59681843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 87
               

               Conread position:
               126-247
               

               Cow position:
               chr3:73410464-73410344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 58
               

               Conread position:
               127-245
               

               Cow position:
               chr3:76168450-76168569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               127-247
               

               Cow position:
               chr3:2016611-2016496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 80
               

               Conread position:
               127-247
               

               Cow position:
               chr3:2434559-2434677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               15, 25
               

               Conread position:
               128-247
               

               Cow position:
               chr3:61023843-61023962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               102
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               129-224
               

               Cow position:
               chr3:20802463-20802558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               13, 86
               

               Conread position:
               129-235
               

               Cow position:
               chr3:59040748-59040641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               109
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               5, 92
               

               Conread position:
               129-236
               

               Cow position:
               chr3:68648354-68648245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               129-242
               

               Cow position:
               chr3:30462999-30463112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 47
               

               Conread position:
               129-242
               

               Cow position:
               chr3:49996539-49996655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               129-242
               

               Cow position:
               chr3:57577873-57577762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 47
               

               Conread position:
               129-243
               

               Cow position:
               chr3:42484104-42483993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 30
               

               Conread position:
               129-244
               

               Cow position:
               chr3:68303495-68303378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               129-245
               

               Cow position:
               chr3:66563962-66563845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               129-245
               

               Cow position:
               chr3:72649809-72649928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               129-246
               

               Cow position:
               chr3:17952769-17952654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               129-247
               

               Cow position:
               chr3:19044591-19044710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               129-247
               

               Cow position:
               chr3:25735725-25735845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               6, 87
               

               Conread position:
               129-247
               

               Cow position:
               chr3:29234500-29234620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               104
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               6, 24
               

               Conread position:
               130-245
               

               Cow position:
               chr3:9718072-9718189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               131-244
               

               Cow position:
               chr3:22899556-22899669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 89
               

               Conread position:
               131-247
               

               Cow position:
               chr3:23804677-23804566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 28
               

               Conread position:
               132-240
               

               Cow position:
               chr3:2636760-2636869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-241
               

               Cow position:
               chr3:986189-986079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-242
               

               Cow position:
               chr3:19711163-19711273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               132-243
               

               Cow position:
               chr3:2675206-2675094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               132-243
               

               Cow position:
               chr3:21694401-21694289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               10, 53
               

               Conread position:
               132-243
               

               Cow position:
               chr3:21866864-21866973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 54
               

               Conread position:
               132-244
               

               Cow position:
               chr3:4071595-4071708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-244
               

               Cow position:
               chr3:8147349-8147462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 57
               

               Conread position:
               132-244
               

               Cow position:
               chr3:18764279-18764165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-244
               

               Cow position:
               chr3:24468210-24468321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               132-244
               

               Cow position:
               chr3:29334237-29334349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               132-244
               

               Cow position:
               chr3:45667169-45667280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               10, 64
               

               Conread position:
               132-244
               

               Cow position:
               chr3:59702348-59702232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               132-245
               

               Cow position:
               chr3:635352-635240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 40
               

               Conread position:
               132-245
               

               Cow position:
               chr3:2648334-2648447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               132-245
               

               Cow position:
               chr3:4268400-4268513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               132-245
               

               Cow position:
               chr3:11281943-11281829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-245
               

               Cow position:
               chr3:15973744-15973629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-245
               

               Cow position:
               chr3:23920252-23920366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-245
               

               Cow position:
               chr3:55105972-55106086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-245
               

               Cow position:
               chr3:59926807-59926692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-245
               

               Cow position:
               chr3:61680491-61680377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-245
               

               Cow position:
               chr3:72027813-72027699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-246
               

               Cow position:
               chr3:62789776-62789893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-247
               

               Cow position:
               chr3:621615-621495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               97
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-247
               

               Cow position:
               chr3:9662995-9663111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-247
               

               Cow position:
               chr3:15443552-15443668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               132-247
               

               Cow position:
               chr3:22078252-22078136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-247
               

               Cow position:
               chr3:37641500-37641387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               10, 88
               

               Conread position:
               132-247
               

               Cow position:
               chr3:48900156-48900272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               132-247
               

               Cow position:
               chr3:51150304-51150189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               118
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               132-247
               

               Cow position:
               chr3:81087463-81087578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               132-247
               

               Cow position:
               chr3:84807150-84807267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               96
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               132-262
               

               Cow position:
               chr3:75974905-75975035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               10, 115
               

               Conread position:
               132-268
               

               Cow position:
               chr3:2506302-2506438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 129
               

               Conread position:
               133-244
               

               Cow position:
               chr3:23733297-23733408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               95
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 19
               

               Conread position:
               133-245
               

               Cow position:
               chr3:83934897-83934788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               9, 81
               

               Conread position:
               133-247
               

               Cow position:
               chr3:53271007-53270891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               133-247
               

               Cow position:
               chr3:59272004-59271891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 83
               

               Conread position:
               134-246
               

               Cow position:
               chr3:15780932-15781044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 86
               

               Conread position:
               134-247
               

               Cow position:
               chr3:74644732-74644618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               134-275
               

               Cow position:
               chr3:42933655-42933512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               135-237
               

               Cow position:
               chr3:56023194-56023092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               8, 93
               

               Conread position:
               135-246
               

               Cow position:
               chr3:65308282-65308394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               136-247
               

               Cow position:
               chr3:20888491-20888603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               137-247
               

               Cow position:
               chr3:67942364-67942475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               137-247
               

               Cow position:
               chr3:70756470-70756581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               140-245
               

               Cow position:
               chr3:76138624-76138520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               141-244
               

               Cow position:
               chr3:12090841-12090736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               141-245
               

               Cow position:
               chr3:56754371-56754473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               141-245
               

               Cow position:
               chr3:62312962-62312858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               141-245
               

               Cow position:
               chr3:62370221-62370117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               141-247
               

               Cow position:
               chr3:65969338-65969228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               142-245
               

               Cow position:
               chr3:40145630-40145527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               142-246
               

               Cow position:
               chr3:45744073-45743971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               142-247
               

               Cow position:
               chr3:19793427-19793530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               142-247
               

               Cow position:
               chr3:53046495-53046602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               142-247
               

               Cow position:
               chr3:66900564-66900672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               142-247
               

               Cow position:
               chr3:75238623-75238518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               106
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               143-247
               

               Cow position:
               chr3:68624381-68624278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               143-253
               

               Cow position:
               chr3:14589068-14589176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               144-247
               

               Cow position:
               chr3:83199674-83199572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               146-245
               

               Cow position:
               chr3:6547585-6547486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               100
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	78-246
Cow position:	chr3:15153916-15153753 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	126
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	60, 20
Conread position:	92-245
Cow position:	chr3:53604528-53604683 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	122
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	25, 20
Conread position:	93-247
Cow position:	chr3:78115373-78115532 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	122
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	17, 0
Conread position:	103-241
Cow position:	chr3:70333766-70333905 (view UCSC Genome Browser custom track)
Alignm length:	141
Alignm identity:	113
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	16, 30
Conread position:	105-246
Cow position:	chr3:11253962-11254106 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	112
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	33, 0
Conread position:	106-223
Cow position:	chr3:45183618-45183739 (view UCSC Genome Browser custom track)
Alignm length:	123
Alignm identity:	98
Alignm E-value:	9e-21
Alignm gaps (pig, cow):	26, 10
Conread position:	106-245
Cow position:	chr3:72626542-72626683 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	110
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	35, 0
Conread position:	107-247
Cow position:	chr3:32436838-32436696 (view UCSC Genome Browser custom track)
Alignm length:	145
Alignm identity:	110
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	26, 5
Conread position:	108-262
Cow position:	chr3:44415373-44415527 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	123
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	27, 15
Conread position:	113-244
Cow position:	chr3:80958316-80958448 (view UCSC Genome Browser custom track)
Alignm length:	133
Alignm identity:	106
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	29, 0
Conread position:	114-244
Cow position:	chr3:52147248-52147380 (view UCSC Genome Browser custom track)
Alignm length:	135
Alignm identity:	107
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	8, 72
Conread position:	117-247
Cow position:	chr3:20065959-20066089 (view UCSC Genome Browser custom track)
Alignm length:	132
Alignm identity:	101
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	26, 12
Conread position:	118-234
Cow position:	chr3:29386057-29385940 (view UCSC Genome Browser custom track)
Alignm length:	118
Alignm identity:	99
Alignm E-value:	7e-28
Alignm gaps (pig, cow):	24, 0
Conread position:	118-245
Cow position:	chr3:33318-33448 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	102
Alignm E-value:	4e-23
Alignm gaps (pig, cow):	24, 0
Conread position:	120-229
Cow position:	chr3:67519990-67520098 (view UCSC Genome Browser custom track)
Alignm length:	111
Alignm identity:	90
Alignm E-value:	9e-21
Alignm gaps (pig, cow):	22, 87
Conread position:	120-247
Cow position:	chr3:3453772-3453640 (view UCSC Genome Browser custom track)
Alignm length:	133
Alignm identity:	108
Alignm E-value:	2e-26
Alignm gaps (pig, cow):	13, 0
Conread position:	121-223
Cow position:	chr3:33460412-33460517 (view UCSC Genome Browser custom track)
Alignm length:	106
Alignm identity:	89
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	15, 0
Conread position:	121-241
Cow position:	chr3:79893311-79893431 (view UCSC Genome Browser custom track)
Alignm length:	122
Alignm identity:	100
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	22, 99
Conread position:	121-243
Cow position:	chr3:7408626-7408500 (view UCSC Genome Browser custom track)
Alignm length:	127
Alignm identity:	98
Alignm E-value:	9e-21
Alignm gaps (pig, cow):	12, 0
Conread position:	121-244
Cow position:	chr3:24304440-24304570 (view UCSC Genome Browser custom track)
Alignm length:	131
Alignm identity:	103
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	21, 0