Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039L19.5 |
| Conread position: | 7-322 |
| Cow position: | chr11:40779734-40779420 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 215 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 37, 98 |
| Conread position: | 7-335 |
| Cow position: | chr11:63661661-63661337 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 7-507 |
| Cow position: | chr11:7112361-7112872 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 93 |
| Conread position: | 7-874 |
| Cow position: | chr11:57629161-57628238 (view UCSC Genome Browser custom track) |
| Alignm length: | 928 |
| Alignm identity: | 607 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 7-876 |
| Cow position: | chr11:3491893-3492821 (view UCSC Genome Browser custom track) |
| Alignm length: | 936 |
| Alignm identity: | 617 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 7-876 |
| Cow position: | chr11:4042184-4041262 (view UCSC Genome Browser custom track) |
| Alignm length: | 934 |
| Alignm identity: | 610 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 77 |
| Conread position: | 7-876 |
| Cow position: | chr11:17108787-17107876 (view UCSC Genome Browser custom track) |
| Alignm length: | 924 |
| Alignm identity: | 584 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 7-876 |
| Cow position: | chr11:28230864-28229943 (view UCSC Genome Browser custom track) |
| Alignm length: | 943 |
| Alignm identity: | 624 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 7-876 |
| Cow position: | chr11:37478237-37477309 (view UCSC Genome Browser custom track) |
| Alignm length: | 934 |
| Alignm identity: | 614 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 7-876 |
| Cow position: | chr11:53288557-53287645 (view UCSC Genome Browser custom track) |
| Alignm length: | 924 |
| Alignm identity: | 595 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 77 |
| Conread position: | 7-876 |
| Cow position: | chr11:67449373-67450309 (view UCSC Genome Browser custom track) |
| Alignm length: | 942 |
| Alignm identity: | 606 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 25 |
| Conread position: | 10-582 |
| Cow position: | chr11:24676976-24677554 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 10-876 |
| Cow position: | chr11:54208536-54209426 (view UCSC Genome Browser custom track) |
| Alignm length: | 907 |
| Alignm identity: | 633 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 70 |
| Conread position: | 11-320 |
| Cow position: | chr11:45110021-45110329 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 201 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 25-750 |
| Cow position: | chr11:76375539-76374800 (view UCSC Genome Browser custom track) |
| Alignm length: | 751 |
| Alignm identity: | 498 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 26-876 |
| Cow position: | chr11:10211030-10210152 (view UCSC Genome Browser custom track) |
| Alignm length: | 898 |
| Alignm identity: | 614 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 67 |
| Conread position: | 29-355 |
| Cow position: | chr11:66725256-66725577 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 213 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 35-876 |
| Cow position: | chr11:19065348-19064439 (view UCSC Genome Browser custom track) |
| Alignm length: | 915 |
| Alignm identity: | 600 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 44-876 |
| Cow position: | chr11:19103539-19102676 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 603 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 44-876 |
| Cow position: | chr11:26125980-26125121 (view UCSC Genome Browser custom track) |
| Alignm length: | 872 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 45-793 |
| Cow position: | chr11:9737028-9736225 (view UCSC Genome Browser custom track) |
| Alignm length: | 809 |
| Alignm identity: | 512 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 55-361 |
| Cow position: | chr11:30126332-30126025 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 58-876 |
| Cow position: | chr11:15982576-15983434 (view UCSC Genome Browser custom track) |
| Alignm length: | 877 |
| Alignm identity: | 562 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 34 |
| Conread position: | 68-876 |
| Cow position: | chr11:67847624-67846761 (view UCSC Genome Browser custom track) |
| Alignm length: | 870 |
| Alignm identity: | 577 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 15 |
| Conread position: | 72-876 |
| Cow position: | chr11:44496604-44495788 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 97-876 |
| Cow position: | chr11:8262697-8261893 (view UCSC Genome Browser custom track) |
| Alignm length: | 816 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 267, 40 |
| Conread position: | 97-876 |
| Cow position: | chr11:28062673-28063491 (view UCSC Genome Browser custom track) |
| Alignm length: | 826 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 40 |
| Conread position: | 103-876 |
| Cow position: | chr11:52418373-52419198 (view UCSC Genome Browser custom track) |
| Alignm length: | 832 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 50 |
| Conread position: | 120-876 |
| Cow position: | chr11:4271820-4271061 (view UCSC Genome Browser custom track) |
| Alignm length: | 789 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 206 |
| Conread position: | 144-624 |
| Cow position: | chr11:53432725-53432230 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 302 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 15, 76 |
| Conread position: | 144-869 |
| Cow position: | chr11:28055546-28054797 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 149 |
| Conread position: | 145-419 |
| Cow position: | chr11:56178969-56179240 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 69 |
| Conread position: | 149-647 |
| Cow position: | chr11:17925505-17925009 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 310 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 43, 32 |
| Conread position: | 149-876 |
| Cow position: | chr11:25526648-25527370 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 172 |
| Conread position: | 149-876 |
| Cow position: | chr11:43515600-43514820 (view UCSC Genome Browser custom track) |
| Alignm length: | 784 |
| Alignm identity: | 545 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 15 |
| Conread position: | 152-876 |
| Cow position: | chr11:42428395-42429144 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 34 |
| Conread position: | 153-876 |
| Cow position: | chr11:9158352-9157616 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 21 |
| Conread position: | 156-403 |
| Cow position: | chr11:7073547-7073305 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 22, 157 |
| Conread position: | 156-598 |
| Cow position: | chr11:24242512-24242954 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 51, 76 |
| Conread position: | 158-372 |
| Cow position: | chr11:12352229-12352009 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 158-453 |
| Cow position: | chr11:8243767-8244060 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 158-850 |
| Cow position: | chr11:4028490-4027770 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 45 |
| Conread position: | 158-851 |
| Cow position: | chr11:38836356-38835630 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 494 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 158-868 |
| Cow position: | chr11:10846514-10847247 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 106 |
| Conread position: | 158-869 |
| Cow position: | chr11:58133417-58134173 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 158-876 |
| Cow position: | chr11:23876364-23877113 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 158-876 |
| Cow position: | chr11:24392388-24393127 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 158-876 |
| Cow position: | chr11:37094001-37093251 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 135 |
| Conread position: | 158-876 |
| Cow position: | chr11:72110898-72110155 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 159-876 |
| Cow position: | chr11:81853527-81852822 (view UCSC Genome Browser custom track) |
| Alignm length: | 729 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 5 |
| Conread position: | 160-778 |
| Cow position: | chr11:52462133-52462778 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 511 |
| Conread position: | 164-380 |
| Cow position: | chr11:75919624-75919842 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 164 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 164-581 |
| Cow position: | chr11:44507247-44507665 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 125, 37 |
| Conread position: | 164-612 |
| Cow position: | chr11:9220949-9220488 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 53 |
| Conread position: | 164-648 |
| Cow position: | chr11:12092823-12093327 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 184 |
| Conread position: | 164-737 |
| Cow position: | chr11:7686964-7687589 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 53 |
| Conread position: | 164-857 |
| Cow position: | chr11:28050701-28050003 (view UCSC Genome Browser custom track) |
| Alignm length: | 721 |
| Alignm identity: | 445 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 56, 50 |
| Conread position: | 164-876 |
| Cow position: | chr11:41171610-41170882 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 53 |
| Conread position: | 164-876 |
| Cow position: | chr11:65162461-65161753 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 130 |
| Conread position: | 164-876 |
| Cow position: | chr11:77729457-77728717 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 37 |
| Conread position: | 166-869 |
| Cow position: | chr11:85394740-85394008 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 51 |
| Conread position: | 166-876 |
| Cow position: | chr11:12359350-12358615 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 29 |
| Conread position: | 166-876 |
| Cow position: | chr11:29669556-29668818 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 22 |
| Conread position: | 166-876 |
| Cow position: | chr11:71328715-71329454 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 51 |
| Conread position: | 167-360 |
| Cow position: | chr11:75132599-75132794 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 167-869 |
| Cow position: | chr11:21466178-21466880 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 167-876 |
| Cow position: | chr11:8888071-8887346 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 209 |
| Conread position: | 167-876 |
| Cow position: | chr11:9660303-9659588 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 50 |
| Conread position: | 167-876 |
| Cow position: | chr11:15997983-15998703 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 146 |
| Conread position: | 167-903 |
| Cow position: | chr11:34019989-34020723 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 110 |
| Conread position: | 176-874 |
| Cow position: | chr11:37492545-37491833 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 140 |
| Conread position: | 176-876 |
| Cow position: | chr11:30304360-30305041 (view UCSC Genome Browser custom track) |
| Alignm length: | 724 |
| Alignm identity: | 499 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 196 |
| Conread position: | 177-869 |
| Cow position: | chr11:11987199-11987911 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 40 |
| Conread position: | 199-567 |
| Cow position: | chr11:7394228-7394597 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 170, 18 |
| Conread position: | 281-876 |
| Cow position: | chr11:32450042-32450677 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 47 |
| Conread position: | 295-876 |
| Cow position: | chr11:36744991-36744370 (view UCSC Genome Browser custom track) |
| Alignm length: | 625 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 342 |
| Conread position: | 302-504 |
| Cow position: | chr11:9607466-9607259 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 302-876 |
| Cow position: | chr11:20921551-20920935 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 173 |
| Conread position: | 303-590 |
| Cow position: | chr11:31925406-31925705 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 85 |
| Conread position: | 312-876 |
| Cow position: | chr11:1496855-1496264 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 185 |
| Conread position: | 318-862 |
| Cow position: | chr11:43731643-43732204 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 372 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 172 |
| Conread position: | 334-872 |
| Cow position: | chr11:30126001-30125442 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 356-876 |
| Cow position: | chr11:63660324-63659771 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 18 |
| Conread position: | 368-869 |
| Cow position: | chr11:44157961-44157434 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 6 |
| Conread position: | 369-675 |
| Cow position: | chr11:40777458-40777129 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 84, 5 |
| Conread position: | 372-876 |
| Cow position: | chr11:29234366-29233847 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 332 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 84, 114 |
| Conread position: | 385-745 |
| Cow position: | chr11:31414947-31414560 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 42, 48 |
| Conread position: | 386-872 |
| Cow position: | chr11:33044826-33044317 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 329 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 69, 10 |
| Conread position: | 397-876 |
| Cow position: | chr11:44861227-44860719 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 379 |
| Conread position: | 409-876 |
| Cow position: | chr11:17220893-17220409 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 91 |
| Conread position: | 443-704 |
| Cow position: | chr11:17280883-17280612 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 66, 89 |
| Conread position: | 451-876 |
| Cow position: | chr11:12351705-12351255 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 254 |
| Conread position: | 467-870 |
| Cow position: | chr11:8244095-8244512 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 121 |
| Conread position: | 487-876 |
| Cow position: | chr11:75919822-75920223 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 108 |
| Conread position: | 512-794 |
| Cow position: | chr11:77235184-77235494 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 16, 263 |
| Conread position: | 540-872 |
| Cow position: | chr11:7113056-7113401 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 152 |
| Conread position: | 540-876 |
| Cow position: | chr11:9607120-9606767 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 255 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 49, 220 |
| Conread position: | 545-876 |
| Cow position: | chr11:8282555-8282886 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 44 |
| Conread position: | 591-876 |
| Cow position: | chr11:61401520-61401241 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 604-865 |
| Cow position: | chr11:45110891-45111160 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 203 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 79, 149 |
| Conread position: | 604-874 |
| Cow position: | chr11:10049655-10049928 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 195 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 99, 36 |
| Conread position: | 604-913 |
| Cow position: | chr11:44895486-44895177 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 28, 17 |
| Conread position: | 609-876 |
| Cow position: | chr11:10089871-10090143 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 97, 144 |
| Conread position: | 631-877 |
| Cow position: | chr11:66726023-66726275 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 130 |
| Conread position: | 641-794 |
| Cow position: | chr11:46962849-46962693 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 36, 110 |
| Conread position: | 653-876 |
| Cow position: | chr11:5343638-5343407 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 656-876 |
| Cow position: | chr11:37065541-37065311 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 29, 105 |
| Conread position: | 706-876 |
| Cow position: | chr11:40776902-40776732 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 706-876 |
| Cow position: | chr11:64045638-64045808 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 706-900 |
| Cow position: | chr11:47761290-47761094 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 709-853 |
| Cow position: | chr11:33195056-33194912 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 723-876 |
| Cow position: | chr11:73476965-73477118 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 734-876 |
| Cow position: | chr11:17280628-17280484 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 47, 29 |
| Conread position: | 735-876 |
| Cow position: | chr11:32684952-32685093 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 737-874 |
| Cow position: | chr11:31414251-31414117 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 748-876 |
| Cow position: | chr11:59370669-59370540 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 771-874 |
| Cow position: | chr11:8519697-8519801 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 854-1065 |
| Cow position: | chr11:8283022-8283221 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 29 |
| Conread position: | 881-1039 |
| Cow position: | chr11:30125061-30124909 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 887-1064 |
| Cow position: | chr11:7113863-7114031 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 158, 12 |
| Conread position: | 900-1051 |
| Cow position: | chr11:10090330-10090476 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 49 |
Show alignments to all cow chromosomes.