Cow genome map

Conread name: Ss1.1-Pig4-TMW8039L19.5

Conread position: 7-322
Cow position:
Alignm length: 324
Alignm identity: 215
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 37, 98

Conread position: 7-335
Cow position:
Alignm length: 332
Alignm identity: 214
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 78

Conread position: 7-507
Cow position:
Alignm length: 520
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 93

Conread position: 7-874
Cow position:
Alignm length: 928
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 7-876
Cow position:
Alignm length: 936
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 7-876
Cow position:
Alignm length: 934
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 77

Conread position: 7-876
Cow position:
Alignm length: 924
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 7-876
Cow position:
Alignm length: 943
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 7-876
Cow position:
Alignm length: 934
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 7-876
Cow position:
Alignm length: 924
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 77

Conread position: 7-876
Cow position:
Alignm length: 942
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 25

Conread position: 10-582
Cow position:
Alignm length: 594
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 74

Conread position: 10-876
Cow position:
Alignm length: 907
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 70

Conread position: 11-320
Cow position:
Alignm length: 314
Alignm identity: 201
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 80

Conread position: 25-750
Cow position:
Alignm length: 751
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 75

Conread position: 26-876
Cow position:
Alignm length: 898
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 67

Conread position: 29-355
Cow position:
Alignm length: 333
Alignm identity: 213
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 17, 43

Conread position: 35-876
Cow position:
Alignm length: 915
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 10

Conread position: 44-876
Cow position:
Alignm length: 878
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 44-876
Cow position:
Alignm length: 872
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 45-793
Cow position:
Alignm length: 809
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 39

Conread position: 55-361
Cow position:
Alignm length: 314
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 44

Conread position: 58-876
Cow position:
Alignm length: 877
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 34

Conread position: 68-876
Cow position:
Alignm length: 870
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 15

Conread position: 72-876
Cow position:
Alignm length: 826
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 26

Conread position: 97-876
Cow position:
Alignm length: 816
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 40

Conread position: 97-876
Cow position:
Alignm length: 826
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 40

Conread position: 103-876
Cow position:
Alignm length: 832
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 50

Conread position: 120-876
Cow position:
Alignm length: 789
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 206

Conread position: 144-624
Cow position:
Alignm length: 503
Alignm identity: 302
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 15, 76

Conread position: 144-869
Cow position:
Alignm length: 760
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 149

Conread position: 145-419
Cow position:
Alignm length: 277
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 69

Conread position: 149-647
Cow position:
Alignm length: 510
Alignm identity: 310
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 43, 32

Conread position: 149-876
Cow position:
Alignm length: 765
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 172

Conread position: 149-876
Cow position:
Alignm length: 784
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 15

Conread position: 152-876
Cow position:
Alignm length: 763
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 34

Conread position: 153-876
Cow position:
Alignm length: 753
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 21

Conread position: 156-403
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 22, 157

Conread position: 156-598
Cow position:
Alignm length: 454
Alignm identity: 283
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 76

Conread position: 158-372
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 10, 0

Conread position: 158-453
Cow position:
Alignm length: 300
Alignm identity: 200
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 18

Conread position: 158-850
Cow position:
Alignm length: 728
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 45

Conread position: 158-851
Cow position:
Alignm length: 734
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-868
Cow position:
Alignm length: 748
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 106

Conread position: 158-869
Cow position:
Alignm length: 765
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-876
Cow position:
Alignm length: 760
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 60

Conread position: 158-876
Cow position:
Alignm length: 755
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-876
Cow position:
Alignm length: 757
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 135

Conread position: 158-876
Cow position:
Alignm length: 754
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 159-876
Cow position:
Alignm length: 729
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 5

Conread position: 160-778
Cow position:
Alignm length: 659
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 511

Conread position: 164-380
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 55, 0

Conread position: 164-581
Cow position:
Alignm length: 431
Alignm identity: 280
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 125, 37

Conread position: 164-612
Cow position:
Alignm length: 470
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 53

Conread position: 164-648
Cow position:
Alignm length: 506
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 184

Conread position: 164-737
Cow position:
Alignm length: 631
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 53

Conread position: 164-857
Cow position:
Alignm length: 721
Alignm identity: 445
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 56, 50

Conread position: 164-876
Cow position:
Alignm length: 750
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 53

Conread position: 164-876
Cow position:
Alignm length: 735
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 130

Conread position: 164-876
Cow position:
Alignm length: 747
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 37

Conread position: 166-869
Cow position:
Alignm length: 741
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 51

Conread position: 166-876
Cow position:
Alignm length: 745
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 29

Conread position: 166-876
Cow position:
Alignm length: 747
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 22

Conread position: 166-876
Cow position:
Alignm length: 750
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 51

Conread position: 167-360
Cow position:
Alignm length: 196
Alignm identity: 142
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 167-869
Cow position:
Alignm length: 730
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 50

Conread position: 167-876
Cow position:
Alignm length: 742
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 209

Conread position: 167-876
Cow position:
Alignm length: 738
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 50

Conread position: 167-876
Cow position:
Alignm length: 747
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 146

Conread position: 167-903
Cow position:
Alignm length: 766
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 110

Conread position: 176-874
Cow position:
Alignm length: 743
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 140

Conread position: 176-876
Cow position:
Alignm length: 724
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 196

Conread position: 177-869
Cow position:
Alignm length: 728
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 40

Conread position: 199-567
Cow position:
Alignm length: 386
Alignm identity: 261
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 170, 18

Conread position: 281-876
Cow position:
Alignm length: 641
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 47

Conread position: 295-876
Cow position:
Alignm length: 625
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 342

Conread position: 302-504
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 72, 0

Conread position: 302-876
Cow position:
Alignm length: 620
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 173

Conread position: 303-590
Cow position:
Alignm length: 304
Alignm identity: 207
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 85

Conread position: 312-876
Cow position:
Alignm length: 600
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 185

Conread position: 318-862
Cow position:
Alignm length: 571
Alignm identity: 372
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 172

Conread position: 334-872
Cow position:
Alignm length: 570
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 12

Conread position: 356-876
Cow position:
Alignm length: 556
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 18

Conread position: 368-869
Cow position:
Alignm length: 533
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 6

Conread position: 369-675
Cow position:
Alignm length: 332
Alignm identity: 224
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 84, 5

Conread position: 372-876
Cow position:
Alignm length: 527
Alignm identity: 332
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 84, 114

Conread position: 385-745
Cow position:
Alignm length: 390
Alignm identity: 273
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 42, 48

Conread position: 386-872
Cow position:
Alignm length: 516
Alignm identity: 329
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 69, 10

Conread position: 397-876
Cow position:
Alignm length: 510
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 379

Conread position: 409-876
Cow position:
Alignm length: 493
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 91

Conread position: 443-704
Cow position:
Alignm length: 277
Alignm identity: 188
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 66, 89

Conread position: 451-876
Cow position:
Alignm length: 454
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 254

Conread position: 467-870
Cow position:
Alignm length: 422
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 121

Conread position: 487-876
Cow position:
Alignm length: 410
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 108

Conread position: 512-794
Cow position:
Alignm length: 312
Alignm identity: 221
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 16, 263

Conread position: 540-872
Cow position:
Alignm length: 351
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 152

Conread position: 540-876
Cow position:
Alignm length: 358
Alignm identity: 255
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 49, 220

Conread position: 545-876
Cow position:
Alignm length: 339
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 44

Conread position: 591-876
Cow position:
Alignm length: 290
Alignm identity: 203
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 86, 8

Conread position: 604-865
Cow position:
Alignm length: 273
Alignm identity: 203
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 79, 149

Conread position: 604-874
Cow position:
Alignm length: 277
Alignm identity: 195
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 99, 36

Conread position: 604-913
Cow position:
Alignm length: 321
Alignm identity: 220
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 28, 17

Conread position: 609-876
Cow position:
Alignm length: 275
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 144

Conread position: 631-877
Cow position:
Alignm length: 256
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 130

Conread position: 641-794
Cow position:
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 110

Conread position: 653-876
Cow position:
Alignm length: 233
Alignm identity: 172
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 24, 102

Conread position: 656-876
Cow position:
Alignm length: 234
Alignm identity: 180
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 29, 105

Conread position: 706-876
Cow position:
Alignm length: 172
Alignm identity: 136
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 55, 41

Conread position: 706-876
Cow position:
Alignm length: 172
Alignm identity: 137
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 55, 41

Conread position: 706-900
Cow position:
Alignm length: 197
Alignm identity: 122
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 55, 0

Conread position: 709-853
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 52, 38

Conread position: 723-876
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 38, 24

Conread position: 734-876
Cow position:
Alignm length: 146
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 47, 29

Conread position: 735-876
Cow position:
Alignm length: 142
Alignm identity: 104
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 737-874
Cow position:
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 0

Conread position: 748-876
Cow position:
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 30

Conread position: 771-874
Cow position:
Alignm length: 105
Alignm identity: 86
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 7, 0

Conread position: 854-1065
Cow position:
Alignm length: 215
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 29

Conread position: 881-1039
Cow position:
Alignm length: 159
Alignm identity: 123
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 887-1064
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 158, 12

Conread position: 900-1051
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 49

Show alignments to all cow chromosomes.