Cow genome map

Conread name: Ss1.1-Pig4-TMW8039L19.5

Conread position: 1-425
Cow position:
Alignm length: 437
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 100

Conread position: 7-876
Cow position:
Alignm length: 943
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 78

Conread position: 10-367
Cow position:
Alignm length: 362
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 91

Conread position: 10-403
Cow position:
Alignm length: 410
Alignm identity: 282
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 34, 22

Conread position: 10-876
Cow position:
Alignm length: 929
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 75

Conread position: 11-876
Cow position:
Alignm length: 933
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 74

Conread position: 13-869
Cow position:
Alignm length: 900
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 91

Conread position: 14-302
Cow position:
Alignm length: 293
Alignm identity: 197
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 85

Conread position: 33-314
Cow position:
Alignm length: 286
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 32

Conread position: 44-868
Cow position:
Alignm length: 867
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 15

Conread position: 45-876
Cow position:
Alignm length: 890
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 39

Conread position: 48-704
Cow position:
Alignm length: 687
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 7

Conread position: 71-876
Cow position:
Alignm length: 854
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 27

Conread position: 72-514
Cow position:
Alignm length: 451
Alignm identity: 300
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 14, 27

Conread position: 145-869
Cow position:
Alignm length: 761
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 149

Conread position: 145-876
Cow position:
Alignm length: 783
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 156-876
Cow position:
Alignm length: 750
Alignm identity: 461
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 97, 67

Conread position: 158-428
Cow position:
Alignm length: 277
Alignm identity: 185
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 9, 136

Conread position: 158-876
Cow position:
Alignm length: 760
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-876
Cow position:
Alignm length: 750
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 135

Conread position: 159-876
Cow position:
Alignm length: 752
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 18

Conread position: 164-400
Cow position:
Alignm length: 243
Alignm identity: 164
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 166

Conread position: 164-876
Cow position:
Alignm length: 774
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 470

Conread position: 166-867
Cow position:
Alignm length: 740
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 51

Conread position: 167-461
Cow position:
Alignm length: 302
Alignm identity: 216
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 52, 65

Conread position: 167-876
Cow position:
Alignm length: 740
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 143

Conread position: 175-840
Cow position:
Alignm length: 699
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 41

Conread position: 176-876
Cow position:
Alignm length: 735
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 41

Conread position: 176-876
Cow position:
Alignm length: 737
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 41

Conread position: 188-876
Cow position:
Alignm length: 722
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 26

Conread position: 194-361
Cow position:
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 106

Conread position: 194-876
Cow position:
Alignm length: 724
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 98

Conread position: 281-876
Cow position:
Alignm length: 634
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 18

Conread position: 284-856
Cow position:
Alignm length: 604
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 308

Conread position: 295-876
Cow position:
Alignm length: 628
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 205

Conread position: 302-876
Cow position:
Alignm length: 616
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 138

Conread position: 372-869
Cow position:
Alignm length: 515
Alignm identity: 326
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 55, 83

Conread position: 372-876
Cow position:
Alignm length: 540
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 409

Conread position: 373-876
Cow position:
Alignm length: 526
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 298

Conread position: 397-768
Cow position:
Alignm length: 398
Alignm identity: 261
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 54, 376

Conread position: 398-876
Cow position:
Alignm length: 504
Alignm identity: 338
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 58, 325

Conread position: 452-869
Cow position:
Alignm length: 447
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 217

Conread position: 490-876
Cow position:
Alignm length: 408
Alignm identity: 267
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 45, 34

Conread position: 542-858
Cow position:
Alignm length: 341
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 47, 222

Conread position: 604-875
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 65, 118

Conread position: 735-876
Cow position:
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 899-1061
Cow position:
Alignm length: 165
Alignm identity: 120
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 154, 48

Show alignments to all cow chromosomes.