Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039L19.5
        

               Conread position:
               1-582
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               1-822
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               595
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 48
               

               Conread position:
               7-579
               

               Cow position:
               
               

               Alignm length:
               613
               

               Alignm identity:
               390
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               7-872
               

               Cow position:
               
               

               Alignm length:
               900
               

               Alignm identity:
               635
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 93
               

               Conread position:
               7-873
               

               Cow position:
               
               

               Alignm length:
               916
               

               Alignm identity:
               640
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               934
               

               Alignm identity:
               608
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               948
               

               Alignm identity:
               625
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 46
               

               Conread position:
               10-403
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 8
               

               Conread position:
               10-588
               

               Cow position:
               
               

               Alignm length:
               600
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 91
               

               Conread position:
               10-876
               

               Cow position:
               
               

               Alignm length:
               894
               

               Alignm identity:
               591
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 96
               

               Conread position:
               11-876
               

               Cow position:
               
               

               Alignm length:
               914
               

               Alignm identity:
               563
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               27, 75
               

               Conread position:
               25-876
               

               Cow position:
               
               

               Alignm length:
               910
               

               Alignm identity:
               592
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 80
               

               Conread position:
               29-612
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               392
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               17, 67
               

               Conread position:
               29-876
               

               Cow position:
               
               

               Alignm length:
               885
               

               Alignm identity:
               591
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 42
               

               Conread position:
               32-876
               

               Cow position:
               
               

               Alignm length:
               868
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 32
               

               Conread position:
               32-876
               

               Cow position:
               
               

               Alignm length:
               877
               

               Alignm identity:
               579
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               32-876
               

               Cow position:
               
               

               Alignm length:
               889
               

               Alignm identity:
               602
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               40-876
               

               Cow position:
               
               

               Alignm length:
               901
               

               Alignm identity:
               592
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 44
               

               Conread position:
               44-876
               

               Cow position:
               
               

               Alignm length:
               867
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               45-322
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               45-389
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               67-876
               

               Cow position:
               
               

               Alignm length:
               850
               

               Alignm identity:
               595
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 29
               

               Conread position:
               69-873
               

               Cow position:
               
               

               Alignm length:
               836
               

               Alignm identity:
               562
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 29
               

               Conread position:
               140-875
               

               Cow position:
               
               

               Alignm length:
               770
               

               Alignm identity:
               475
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               21, 10
               

               Conread position:
               145-876
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 71
               

               Conread position:
               149-874
               

               Cow position:
               
               

               Alignm length:
               774
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 65
               

               Conread position:
               154-876
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               538
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 62
               

               Conread position:
               156-861
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 63
               

               Conread position:
               158-594
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               158-672
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               339
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               60, 111
               

               Conread position:
               158-851
               

               Cow position:
               
               

               Alignm length:
               730
               

               Alignm identity:
               458
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               60, 111
               

               Conread position:
               158-869
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 136
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               758
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               758
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               758
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 61
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 174
               

               Conread position:
               159-876
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 72
               

               Conread position:
               161-874
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 53
               

               Conread position:
               163-869
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 130
               

               Conread position:
               164-402
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               134, 53
               

               Conread position:
               164-786
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               419
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 44
               

               Conread position:
               164-805
               

               Cow position:
               
               

               Alignm length:
               684
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 122
               

               Conread position:
               164-876
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 52
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 127
               

               Conread position:
               167-876
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 204
               

               Conread position:
               167-876
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 204
               

               Conread position:
               175-876
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 143
               

               Conread position:
               175-876
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               472
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               156, 226
               

               Conread position:
               176-366
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               176-668
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               331
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               50, 8
               

               Conread position:
               176-876
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 117
               

               Conread position:
               184-867
               

               Cow position:
               
               

               Alignm length:
               721
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 414
               

               Conread position:
               210-876
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 67
               

               Conread position:
               216-876
               

               Cow position:
               
               

               Alignm length:
               692
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 166
               

               Conread position:
               242-874
               

               Cow position:
               
               

               Alignm length:
               679
               

               Alignm identity:
               481
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 78
               

               Conread position:
               281-876
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 213
               

               Conread position:
               295-876
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 494
               

               Conread position:
               299-876
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 17
               

               Conread position:
               302-595
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               147, 80
               

               Conread position:
               332-859
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 215
               

               Conread position:
               358-876
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 16
               

               Conread position:
               366-869
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 73
               

               Conread position:
               366-876
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 98
               

               Conread position:
               372-876
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               329
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               28, 39
               

               Conread position:
               374-876
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 32
               

               Conread position:
               385-869
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 36
               

               Conread position:
               410-876
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 261
               

               Conread position:
               443-876
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 22
               

               Conread position:
               447-876
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 131
               

               Conread position:
               496-876
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 274
               

               Conread position:
               527-819
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               12, 130
               

               Conread position:
               530-874
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 216
               

               Conread position:
               576-875
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               577-876
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 55
               

               Conread position:
               585-876
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 71
               

               Conread position:
               590-876
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 11
               

               Conread position:
               591-876
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 8
               

               Conread position:
               604-868
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               604-869
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               66, 151
               

               Conread position:
               604-876
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               73, 151
               

               Conread position:
               622-876
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               632-876
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               672-874
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               33, 8
               

               Conread position:
               688-876
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               703-876
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               706-874
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 49
               

               Conread position:
               709-874
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               709-876
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 20
               

               Conread position:
               732-876
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               30, 15
               

               Conread position:
               736-876
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               886-1065
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               170, 13
               

               Conread position:
               899-1061
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               154, 42
               

               Conread position:
               908-1065
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               144, 40
               
Show alignments to all cow chromosomes.