Cow genome map

Conread name: Ss1.1-Pig4-TMW8039L19.5

Conread position: 1-325
Cow position:
Alignm length: 335
Alignm identity: 231
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 7, 100

Conread position: 1-413
Cow position:
Alignm length: 429
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 86

Conread position: 7-364
Cow position:
Alignm length: 364
Alignm identity: 252
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 37, 53

Conread position: 7-369
Cow position:
Alignm length: 373
Alignm identity: 238
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 39, 92

Conread position: 7-607
Cow position:
Alignm length: 643
Alignm identity: 414
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 22, 40

Conread position: 7-881
Cow position:
Alignm length: 922
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 69

Conread position: 10-369
Cow position:
Alignm length: 368
Alignm identity: 237
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 30, 87

Conread position: 10-869
Cow position:
Alignm length: 906
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 76

Conread position: 12-662
Cow position:
Alignm length: 680
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 88

Conread position: 26-876
Cow position:
Alignm length: 902
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 19

Conread position: 29-675
Cow position:
Alignm length: 672
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 36

Conread position: 32-749
Cow position:
Alignm length: 757
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 33

Conread position: 44-419
Cow position:
Alignm length: 383
Alignm identity: 241
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 20, 37

Conread position: 44-476
Cow position:
Alignm length: 443
Alignm identity: 290
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 20, 37

Conread position: 44-876
Cow position:
Alignm length: 874
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 44-876
Cow position:
Alignm length: 873
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 57-876
Cow position:
Alignm length: 879
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 27

Conread position: 68-876
Cow position:
Alignm length: 881
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 15

Conread position: 144-445
Cow position:
Alignm length: 310
Alignm identity: 211
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 28

Conread position: 144-876
Cow position:
Alignm length: 758
Alignm identity: 463
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 31

Conread position: 149-869
Cow position:
Alignm length: 737
Alignm identity: 454
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 66, 172

Conread position: 149-876
Cow position:
Alignm length: 752
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 83

Conread position: 151-545
Cow position:
Alignm length: 410
Alignm identity: 274
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 72, 66

Conread position: 158-666
Cow position:
Alignm length: 541
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 60

Conread position: 158-869
Cow position:
Alignm length: 755
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-876
Cow position:
Alignm length: 753
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 215, 175

Conread position: 158-876
Cow position:
Alignm length: 753
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 60

Conread position: 158-876
Cow position:
Alignm length: 753
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-876
Cow position:
Alignm length: 762
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-876
Cow position:
Alignm length: 766
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-876
Cow position:
Alignm length: 762
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-876
Cow position:
Alignm length: 764
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 60

Conread position: 158-876
Cow position:
Alignm length: 760
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 60

Conread position: 158-876
Cow position:
Alignm length: 750
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 160-378
Cow position:
Alignm length: 221
Alignm identity: 148
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 165

Conread position: 160-403
Cow position:
Alignm length: 245
Alignm identity: 173
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 210, 125

Conread position: 160-746
Cow position:
Alignm length: 626
Alignm identity: 394
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 138, 34

Conread position: 164-505
Cow position:
Alignm length: 357
Alignm identity: 248
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 55, 143

Conread position: 164-506
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 136, 46

Conread position: 164-596
Cow position:
Alignm length: 450
Alignm identity: 300
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 137, 127

Conread position: 164-677
Cow position:
Alignm length: 540
Alignm identity: 349
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 53, 35

Conread position: 164-856
Cow position:
Alignm length: 736
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 53

Conread position: 164-876
Cow position:
Alignm length: 747
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 54

Conread position: 164-876
Cow position:
Alignm length: 747
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 169

Conread position: 165-735
Cow position:
Alignm length: 604
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 39

Conread position: 166-711
Cow position:
Alignm length: 576
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 51

Conread position: 166-876
Cow position:
Alignm length: 743
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 51

Conread position: 166-911
Cow position:
Alignm length: 797
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 51

Conread position: 167-518
Cow position:
Alignm length: 359
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 209

Conread position: 167-846
Cow position:
Alignm length: 710
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 14

Conread position: 167-876
Cow position:
Alignm length: 741
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 209

Conread position: 167-876
Cow position:
Alignm length: 753
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 50

Conread position: 176-774
Cow position:
Alignm length: 627
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 41

Conread position: 179-876
Cow position:
Alignm length: 723
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 35

Conread position: 181-872
Cow position:
Alignm length: 717
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 144

Conread position: 197-876
Cow position:
Alignm length: 717
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 201-853
Cow position:
Alignm length: 664
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 19

Conread position: 254-876
Cow position:
Alignm length: 660
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 37

Conread position: 274-876
Cow position:
Alignm length: 645
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 90

Conread position: 281-874
Cow position:
Alignm length: 639
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 509

Conread position: 291-876
Cow position:
Alignm length: 613
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 90

Conread position: 292-876
Cow position:
Alignm length: 622
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 10

Conread position: 295-588
Cow position:
Alignm length: 318
Alignm identity: 209
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 295-874
Cow position:
Alignm length: 629
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 64

Conread position: 295-876
Cow position:
Alignm length: 630
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 499

Conread position: 297-876
Cow position:
Alignm length: 613
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 143

Conread position: 299-876
Cow position:
Alignm length: 614
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 307

Conread position: 300-791
Cow position:
Alignm length: 533
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 294

Conread position: 302-876
Cow position:
Alignm length: 607
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 76

Conread position: 303-876
Cow position:
Alignm length: 608
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 324-597
Cow position:
Alignm length: 285
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 28

Conread position: 331-876
Cow position:
Alignm length: 577
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 15

Conread position: 334-780
Cow position:
Alignm length: 461
Alignm identity: 305
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 118, 18

Conread position: 366-834
Cow position:
Alignm length: 498
Alignm identity: 327
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 55, 32

Conread position: 374-876
Cow position:
Alignm length: 519
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 89

Conread position: 375-876
Cow position:
Alignm length: 533
Alignm identity: 351
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 80, 21

Conread position: 376-876
Cow position:
Alignm length: 532
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 396

Conread position: 391-874
Cow position:
Alignm length: 508
Alignm identity: 337
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 64, 53

Conread position: 398-876
Cow position:
Alignm length: 510
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 90

Conread position: 402-876
Cow position:
Alignm length: 508
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 359

Conread position: 409-832
Cow position:
Alignm length: 441
Alignm identity: 288
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 47, 63

Conread position: 409-876
Cow position:
Alignm length: 501
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 370

Conread position: 411-869
Cow position:
Alignm length: 478
Alignm identity: 303
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 5, 202

Conread position: 465-876
Cow position:
Alignm length: 430
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 91

Conread position: 487-876
Cow position:
Alignm length: 417
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 494-876
Cow position:
Alignm length: 405
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 168

Conread position: 512-872
Cow position:
Alignm length: 379
Alignm identity: 249
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 20, 253

Conread position: 540-876
Cow position:
Alignm length: 350
Alignm identity: 242
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 54, 150

Conread position: 541-876
Cow position:
Alignm length: 354
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 148

Conread position: 542-876
Cow position:
Alignm length: 353
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 302

Conread position: 544-876
Cow position:
Alignm length: 347
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 69

Conread position: 559-876
Cow position:
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 198

Conread position: 577-874
Cow position:
Alignm length: 309
Alignm identity: 212
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 20, 75

Conread position: 577-874
Cow position:
Alignm length: 303
Alignm identity: 196
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 11, 39

Conread position: 579-869
Cow position:
Alignm length: 297
Alignm identity: 203
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 17, 26

Conread position: 591-876
Cow position:
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 8

Conread position: 604-876
Cow position:
Alignm length: 282
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 151

Conread position: 604-876
Cow position:
Alignm length: 283
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 151

Conread position: 658-848
Cow position:
Alignm length: 201
Alignm identity: 159
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 12, 37

Conread position: 670-839
Cow position:
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 89

Conread position: 706-872
Cow position:
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 706-876
Cow position:
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 43

Conread position: 715-903
Cow position:
Alignm length: 190
Alignm identity: 146
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 46, 37

Conread position: 886-1065
Cow position:
Alignm length: 182
Alignm identity: 147
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 167, 55

Conread position: 887-1048
Cow position:
Alignm length: 165
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 21

Conread position: 887-1065
Cow position:
Alignm length: 181
Alignm identity: 141
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 166, 25

Conread position: 888-1065
Cow position:
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 168, 11

Conread position: 896-1065
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 156, 48

Conread position: 899-1065
Cow position:
Alignm length: 169
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 154, 46

Show alignments to all cow chromosomes.