Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039L19.5
        

               Conread position:
               7-369
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               7-370
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               230
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               30, 78
               

               Conread position:
               7-589
               

               Cow position:
               
               

               Alignm length:
               608
               

               Alignm identity:
               352
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               7-776
               

               Cow position:
               
               

               Alignm length:
               830
               

               Alignm identity:
               483
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               941
               

               Alignm identity:
               615
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               8-876
               

               Cow position:
               
               

               Alignm length:
               913
               

               Alignm identity:
               622
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 96
               

               Conread position:
               10-796
               

               Cow position:
               
               

               Alignm length:
               818
               

               Alignm identity:
               567
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 90
               

               Conread position:
               10-872
               

               Cow position:
               
               

               Alignm length:
               924
               

               Alignm identity:
               597
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 75
               

               Conread position:
               10-876
               

               Cow position:
               
               

               Alignm length:
               933
               

               Alignm identity:
               610
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 75
               

               Conread position:
               32-876
               

               Cow position:
               
               

               Alignm length:
               870
               

               Alignm identity:
               578
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 36
               

               Conread position:
               32-876
               

               Cow position:
               
               

               Alignm length:
               892
               

               Alignm identity:
               597
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 33
               

               Conread position:
               42-876
               

               Cow position:
               
               

               Alignm length:
               890
               

               Alignm identity:
               588
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               44-869
               

               Cow position:
               
               

               Alignm length:
               890
               

               Alignm identity:
               590
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               56-876
               

               Cow position:
               
               

               Alignm length:
               886
               

               Alignm identity:
               583
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               145-876
               

               Cow position:
               
               

               Alignm length:
               800
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 518
               

               Conread position:
               145-876
               

               Cow position:
               
               

               Alignm length:
               797
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 91
               

               Conread position:
               150-372
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               76, 64
               

               Conread position:
               154-612
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               323
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               14, 169
               

               Conread position:
               154-868
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 64
               

               Conread position:
               158-317
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               58, 19
               

               Conread position:
               158-857
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 11
               

               Conread position:
               158-869
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               772
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 42
               

               Conread position:
               160-869
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 104
               

               Conread position:
               160-916
               

               Cow position:
               
               

               Alignm length:
               776
               

               Alignm identity:
               298
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               60, 39
               

               Conread position:
               162-876
               

               Cow position:
               
               

               Alignm length:
               775
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 644
               

               Conread position:
               164-770
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               390
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               62, 50
               

               Conread position:
               164-867
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 52
               

               Conread position:
               164-876
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               483
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 50
               

               Conread position:
               164-876
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 211
               

               Conread position:
               164-876
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 20
               

               Conread position:
               164-876
               

               Cow position:
               
               

               Alignm length:
               728
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 46
               

               Conread position:
               166-869
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               167-380
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               167-588
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 204
               

               Conread position:
               167-833
               

               Cow position:
               
               

               Alignm length:
               694
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 212
               

               Conread position:
               167-866
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 143
               

               Conread position:
               167-876
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               167-876
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 50
               

               Conread position:
               167-876
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 96
               

               Conread position:
               175-876
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 19
               

               Conread position:
               176-401
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               176-592
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 41
               

               Conread position:
               177-514
               

               Cow position:
               
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               38, 87
               

               Conread position:
               179-861
               

               Cow position:
               
               

               Alignm length:
               725
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 123
               

               Conread position:
               189-869
               

               Cow position:
               
               

               Alignm length:
               726
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 28
               

               Conread position:
               204-876
               

               Cow position:
               
               

               Alignm length:
               714
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 83
               

               Conread position:
               253-876
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               452
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               290-803
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 235
               

               Conread position:
               295-876
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 496
               

               Conread position:
               295-876
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 199
               

               Conread position:
               302-850
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 109
               

               Conread position:
               349-876
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 9
               

               Conread position:
               370-903
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 228
               

               Conread position:
               372-596
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               373-876
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 111
               

               Conread position:
               374-876
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 31
               

               Conread position:
               385-804
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 115
               

               Conread position:
               443-876
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 65
               

               Conread position:
               452-902
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 323
               

               Conread position:
               458-876
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               487-872
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               257
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               42, 58
               

               Conread position:
               491-862
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               271
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               37, 5
               

               Conread position:
               512-876
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 208
               

               Conread position:
               527-876
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               17, 93
               

               Conread position:
               540-876
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 228
               

               Conread position:
               540-876
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 223
               

               Conread position:
               604-856
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               73, 90
               

               Conread position:
               604-874
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 148
               

               Conread position:
               604-876
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 151
               

               Conread position:
               604-876
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 67
               

               Conread position:
               630-876
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               55, 131
               

               Conread position:
               641-876
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               36, 114
               

               Conread position:
               686-876
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               743-876
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               18, 106
               

               Conread position:
               765-876
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               886-1043
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               900-1065
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               18, 47
               
Show alignments to all cow chromosomes.