Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039L19.5
        

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 105
               

               Conread position:
               7-317
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               7-840
               

               Cow position:
               
               

               Alignm length:
               904
               

               Alignm identity:
               594
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 73
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               950
               

               Alignm identity:
               620
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               951
               

               Alignm identity:
               629
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 70
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               618
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               28-403
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 53
               

               Conread position:
               28-869
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               595
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 54
               

               Conread position:
               29-361
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 36
               

               Conread position:
               32-876
               

               Cow position:
               
               

               Alignm length:
               869
               

               Alignm identity:
               576
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 31
               

               Conread position:
               36-876
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               586
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 9
               

               Conread position:
               44-403
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               45-876
               

               Cow position:
               
               

               Alignm length:
               881
               

               Alignm identity:
               588
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               54-868
               

               Cow position:
               
               

               Alignm length:
               857
               

               Alignm identity:
               589
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               54-876
               

               Cow position:
               
               

               Alignm length:
               865
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 26
               

               Conread position:
               56-843
               

               Cow position:
               
               

               Alignm length:
               832
               

               Alignm identity:
               590
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 43
               

               Conread position:
               71-367
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               148, 26
               

               Conread position:
               75-876
               

               Cow position:
               
               

               Alignm length:
               839
               

               Alignm identity:
               582
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 28
               

               Conread position:
               154-876
               

               Cow position:
               
               

               Alignm length:
               765
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 66
               

               Conread position:
               158-869
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-874
               

               Cow position:
               
               

               Alignm length:
               762
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 26
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 11
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               159-876
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               540
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 281
               

               Conread position:
               164-453
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               55, 153
               

               Conread position:
               164-704
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 53
               

               Conread position:
               164-743
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 54
               

               Conread position:
               166-380
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               166-380
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               53, 85
               

               Conread position:
               167-875
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 115
               

               Conread position:
               167-876
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 205
               

               Conread position:
               167-876
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 209
               

               Conread position:
               169-590
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               285
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               23, 125
               

               Conread position:
               176-876
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 41
               

               Conread position:
               188-876
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               505
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 130
               

               Conread position:
               190-876
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 125
               

               Conread position:
               223-877
               

               Cow position:
               
               

               Alignm length:
               693
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 68
               

               Conread position:
               239-876
               

               Cow position:
               
               

               Alignm length:
               667
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 77
               

               Conread position:
               245-588
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               131, 88
               

               Conread position:
               295-704
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               299
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               9, 376
               

               Conread position:
               295-876
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 208
               

               Conread position:
               302-876
               

               Cow position:
               
               

               Alignm length:
               619
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 488
               

               Conread position:
               307-876
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               356
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               66, 18
               

               Conread position:
               349-876
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 149
               

               Conread position:
               366-876
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 410
               

               Conread position:
               376-876
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 222
               

               Conread position:
               376-876
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 224
               

               Conread position:
               386-876
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               397-848
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 185
               

               Conread position:
               398-876
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 365
               

               Conread position:
               409-725
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               481-876
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 32
               

               Conread position:
               488-874
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 24
               

               Conread position:
               496-876
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 87
               

               Conread position:
               524-876
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 146
               

               Conread position:
               539-840
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               201
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               542-869
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               23, 18
               

               Conread position:
               542-876
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 118
               

               Conread position:
               542-876
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 224
               

               Conread position:
               591-876
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 8
               

               Conread position:
               604-860
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               71, 35
               

               Conread position:
               604-869
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 149
               

               Conread position:
               604-876
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               214
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 156
               

               Conread position:
               625-876
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               49, 7
               

               Conread position:
               651-876
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               19, 63
               

               Conread position:
               672-876
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               22, 110
               

               Conread position:
               702-868
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               45, 55
               

               Conread position:
               706-875
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               55, 41
               

               Conread position:
               706-876
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               706-876
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               56, 47
               

               Conread position:
               707-876
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               715-869
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               48, 32
               

               Conread position:
               751-876
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               761-868
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               44, 51
               

               Conread position:
               881-1048
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               886-1061
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               163, 22
               

               Conread position:
               886-1065
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               146, 22
               
Show alignments to all cow chromosomes.