Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039L19.5
        

               Conread position:
               3-876
               

               Cow position:
               
               

               Alignm length:
               920
               

               Alignm identity:
               631
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 99
               

               Conread position:
               7-704
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 78
               

               Conread position:
               7-707
               

               Cow position:
               
               

               Alignm length:
               766
               

               Alignm identity:
               496
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               37, 134
               

               Conread position:
               7-875
               

               Cow position:
               
               

               Alignm length:
               936
               

               Alignm identity:
               608
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               10-519
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               325
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               26, 75
               

               Conread position:
               10-876
               

               Cow position:
               
               

               Alignm length:
               926
               

               Alignm identity:
               601
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 75
               

               Conread position:
               13-876
               

               Cow position:
               
               

               Alignm length:
               930
               

               Alignm identity:
               618
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               24-869
               

               Cow position:
               
               

               Alignm length:
               885
               

               Alignm identity:
               588
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 56
               

               Conread position:
               32-647
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               422
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 40
               

               Conread position:
               44-403
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               45-875
               

               Cow position:
               
               

               Alignm length:
               895
               

               Alignm identity:
               581
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               69-526
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 29
               

               Conread position:
               70-561
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               336
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               16, 28
               

               Conread position:
               72-389
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               223
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               78-603
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               358
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               8, 21
               

               Conread position:
               84-876
               

               Cow position:
               
               

               Alignm length:
               833
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 19
               

               Conread position:
               109-388
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               114, 28
               

               Conread position:
               141-876
               

               Cow position:
               
               

               Alignm length:
               773
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 150
               

               Conread position:
               144-869
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 76
               

               Conread position:
               145-748
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 8
               

               Conread position:
               148-876
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 245
               

               Conread position:
               150-876
               

               Cow position:
               
               

               Alignm length:
               775
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 185
               

               Conread position:
               150-876
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               473
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               114, 64
               

               Conread position:
               154-696
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               367
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               101, 47
               

               Conread position:
               158-578
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               289
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               58, 135
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               774
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 123
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               758
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 37
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 93
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 171
               

               Conread position:
               159-876
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 29
               

               Conread position:
               160-607
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               297
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               196, 56
               

               Conread position:
               160-874
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 304
               

               Conread position:
               161-876
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 343
               

               Conread position:
               164-425
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               59, 53
               

               Conread position:
               164-607
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               295
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               62, 50
               

               Conread position:
               164-673
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               334
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               123, 50
               

               Conread position:
               164-876
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               489
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 53
               

               Conread position:
               165-876
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 52
               

               Conread position:
               166-825
               

               Cow position:
               
               

               Alignm length:
               699
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               166-862
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 88
               

               Conread position:
               177-479
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               42, 13
               

               Conread position:
               177-838
               

               Cow position:
               
               

               Alignm length:
               697
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 136
               

               Conread position:
               177-876
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 40
               

               Conread position:
               282-519
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               173, 116
               

               Conread position:
               283-869
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 51
               

               Conread position:
               286-805
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 42
               

               Conread position:
               295-805
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 173
               

               Conread position:
               301-876
               

               Cow position:
               
               

               Alignm length:
               606
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               302-862
               

               Cow position:
               
               

               Alignm length:
               598
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 132
               

               Conread position:
               302-876
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 193
               

               Conread position:
               364-876
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 226
               

               Conread position:
               367-876
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               353
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               372-876
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               352
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               38, 112
               

               Conread position:
               374-876
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 409
               

               Conread position:
               392-831
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 56
               

               Conread position:
               395-876
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 283
               

               Conread position:
               397-876
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 100
               

               Conread position:
               409-876
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               361
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 370
               

               Conread position:
               512-876
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               267
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               19, 62
               

               Conread position:
               540-785
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               46, 140
               

               Conread position:
               542-826
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               45, 118
               

               Conread position:
               604-876
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               604-876
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               123, 94
               

               Conread position:
               604-876
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 151
               

               Conread position:
               606-876
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 181
               

               Conread position:
               632-875
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               706-876
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               57, 20
               

               Conread position:
               706-876
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               55, 41
               

               Conread position:
               711-875
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               51, 42
               

               Conread position:
               735-876
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               740-874
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               104
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               745-876
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               886-1065
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               93, 24
               

               Conread position:
               890-1061
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               154, 56
               

               Conread position:
               899-1065
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               157, 49
               

               Conread position:
               899-1066
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               154, 47
               

               Conread position:
               953-1065
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               100, 0
               
Show alignments to all cow chromosomes.