Cow genome map

Conread name: Ss1.1-Pig4-TMW8039L19.5

Conread position: 3-342
Cow position:
Alignm length: 355
Alignm identity: 246
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 5, 21

Conread position: 7-612
Cow position:
Alignm length: 654
Alignm identity: 416
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 39, 78

Conread position: 7-746
Cow position:
Alignm length: 800
Alignm identity: 469
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 37, 78

Conread position: 7-876
Cow position:
Alignm length: 936
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 78

Conread position: 7-876
Cow position:
Alignm length: 935
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 40

Conread position: 11-876
Cow position:
Alignm length: 908
Alignm identity: 625
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 78

Conread position: 12-876
Cow position:
Alignm length: 907
Alignm identity: 628
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 88

Conread position: 29-359
Cow position:
Alignm length: 332
Alignm identity: 226
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 17, 36

Conread position: 29-876
Cow position:
Alignm length: 875
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 103

Conread position: 32-861
Cow position:
Alignm length: 859
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 37

Conread position: 32-874
Cow position:
Alignm length: 890
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 33

Conread position: 32-876
Cow position:
Alignm length: 873
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 33

Conread position: 33-874
Cow position:
Alignm length: 881
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 32

Conread position: 33-876
Cow position:
Alignm length: 869
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 32

Conread position: 40-771
Cow position:
Alignm length: 777
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 41

Conread position: 44-876
Cow position:
Alignm length: 865
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 45-404
Cow position:
Alignm length: 366
Alignm identity: 226
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 39

Conread position: 45-876
Cow position:
Alignm length: 898
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 47

Conread position: 47-897
Cow position:
Alignm length: 889
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 30

Conread position: 56-874
Cow position:
Alignm length: 881
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 16

Conread position: 70-400
Cow position:
Alignm length: 335
Alignm identity: 222
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 149, 20

Conread position: 72-876
Cow position:
Alignm length: 875
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 365

Conread position: 85-876
Cow position:
Alignm length: 841
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 5

Conread position: 144-868
Cow position:
Alignm length: 765
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 47

Conread position: 145-876
Cow position:
Alignm length: 773
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 8

Conread position: 145-876
Cow position:
Alignm length: 792
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 511

Conread position: 148-845
Cow position:
Alignm length: 732
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 86

Conread position: 149-876
Cow position:
Alignm length: 767
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 155

Conread position: 149-876
Cow position:
Alignm length: 761
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 233

Conread position: 156-876
Cow position:
Alignm length: 756
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 61

Conread position: 158-417
Cow position:
Alignm length: 266
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 61, 135

Conread position: 158-868
Cow position:
Alignm length: 749
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 17

Conread position: 158-869
Cow position:
Alignm length: 752
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-869
Cow position:
Alignm length: 750
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 135

Conread position: 159-670
Cow position:
Alignm length: 534
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 58

Conread position: 160-335
Cow position:
Alignm length: 178
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 160-505
Cow position:
Alignm length: 358
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 240

Conread position: 164-503
Cow position:
Alignm length: 353
Alignm identity: 224
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 88, 53

Conread position: 164-856
Cow position:
Alignm length: 744
Alignm identity: 478
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 261, 53

Conread position: 164-869
Cow position:
Alignm length: 759
Alignm identity: 475
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 127, 50

Conread position: 164-874
Cow position:
Alignm length: 746
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 200

Conread position: 164-876
Cow position:
Alignm length: 751
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 145

Conread position: 164-876
Cow position:
Alignm length: 733
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 53

Conread position: 164-882
Cow position:
Alignm length: 756
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 135

Conread position: 166-876
Cow position:
Alignm length: 735
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 204

Conread position: 167-869
Cow position:
Alignm length: 742
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 50

Conread position: 176-527
Cow position:
Alignm length: 359
Alignm identity: 245
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 46, 41

Conread position: 177-864
Cow position:
Alignm length: 712
Alignm identity: 441
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 172, 24

Conread position: 200-526
Cow position:
Alignm length: 337
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 110

Conread position: 203-712
Cow position:
Alignm length: 533
Alignm identity: 343
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 15, 172

Conread position: 295-736
Cow position:
Alignm length: 480
Alignm identity: 315
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 9, 154

Conread position: 295-804
Cow position:
Alignm length: 555
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 295-876
Cow position:
Alignm length: 618
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 179

Conread position: 295-876
Cow position:
Alignm length: 628
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 213

Conread position: 295-876
Cow position:
Alignm length: 624
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 205

Conread position: 302-840
Cow position:
Alignm length: 575
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 329

Conread position: 304-876
Cow position:
Alignm length: 614
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 6

Conread position: 306-876
Cow position:
Alignm length: 612
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 189

Conread position: 307-806
Cow position:
Alignm length: 535
Alignm identity: 344
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 18

Conread position: 358-876
Cow position:
Alignm length: 546
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 19

Conread position: 358-876
Cow position:
Alignm length: 548
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 47

Conread position: 364-876
Cow position:
Alignm length: 547
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 412

Conread position: 378-876
Cow position:
Alignm length: 511
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 47

Conread position: 393-913
Cow position:
Alignm length: 543
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 77

Conread position: 411-876
Cow position:
Alignm length: 499
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 368

Conread position: 433-874
Cow position:
Alignm length: 469
Alignm identity: 306
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 37, 91

Conread position: 497-876
Cow position:
Alignm length: 408
Alignm identity: 270
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 308

Conread position: 542-876
Cow position:
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 206

Conread position: 604-861
Cow position:
Alignm length: 276
Alignm identity: 204
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 69, 151

Conread position: 604-876
Cow position:
Alignm length: 282
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 604-876
Cow position:
Alignm length: 282
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 604-876
Cow position:
Alignm length: 283
Alignm identity: 188
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 66, 246

Conread position: 604-915
Cow position:
Alignm length: 324
Alignm identity: 231
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 73, 56

Conread position: 672-876
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 35, 81

Conread position: 712-876
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 721-876
Cow position:
Alignm length: 158
Alignm identity: 124
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 19

Conread position: 893-1065
Cow position:
Alignm length: 179
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 12, 55

Conread position: 896-1066
Cow position:
Alignm length: 177
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 19, 38

Conread position: 897-1061
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 899-1065
Cow position:
Alignm length: 169
Alignm identity: 133
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 156, 23

Conread position: 899-1078
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 109, 45

Show alignments to all cow chromosomes.