Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039L19.5
        

               Conread position:
               3-383
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               926
               

               Alignm identity:
               617
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               941
               

               Alignm identity:
               617
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               943
               

               Alignm identity:
               613
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 25
               

               Conread position:
               10-876
               

               Cow position:
               
               

               Alignm length:
               931
               

               Alignm identity:
               615
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 94
               

               Conread position:
               14-581
               

               Cow position:
               
               

               Alignm length:
               614
               

               Alignm identity:
               392
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               50, 84
               

               Conread position:
               19-876
               

               Cow position:
               
               

               Alignm length:
               896
               

               Alignm identity:
               628
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 80
               

               Conread position:
               55-357
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               68-876
               

               Cow position:
               
               

               Alignm length:
               873
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 15
               

               Conread position:
               78-674
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 19
               

               Conread position:
               103-876
               

               Cow position:
               
               

               Alignm length:
               812
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               145-876
               

               Cow position:
               
               

               Alignm length:
               786
               

               Alignm identity:
               542
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 235
               

               Conread position:
               149-872
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               466
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               30, 67
               

               Conread position:
               154-759
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               398
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               85, 50
               

               Conread position:
               156-528
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               145, 8
               

               Conread position:
               156-581
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               302
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               67, 45
               

               Conread position:
               158-504
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               9, 62
               

               Conread position:
               158-676
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               357
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               182, 11
               

               Conread position:
               158-869
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 129
               

               Conread position:
               158-869
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-869
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 136
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 135
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               161-876
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 138
               

               Conread position:
               161-876
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               162-876
               

               Cow position:
               
               

               Alignm length:
               748
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 55
               

               Conread position:
               164-862
               

               Cow position:
               
               

               Alignm length:
               735
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 50
               

               Conread position:
               164-876
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 96
               

               Conread position:
               164-876
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 37
               

               Conread position:
               166-704
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 26
               

               Conread position:
               166-869
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               471
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 33
               

               Conread position:
               175-874
               

               Cow position:
               
               

               Alignm length:
               737
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 63
               

               Conread position:
               176-876
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 41
               

               Conread position:
               196-876
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               197-518
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               197-698
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 20
               

               Conread position:
               201-445
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               281-876
               

               Cow position:
               
               

               Alignm length:
               638
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 9
               

               Conread position:
               366-779
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               302
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               33, 133
               

               Conread position:
               366-869
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 415
               

               Conread position:
               372-856
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 109
               

               Conread position:
               384-675
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               69, 215
               

               Conread position:
               388-876
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 294
               

               Conread position:
               396-876
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               338
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               59, 86
               

               Conread position:
               398-871
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               331
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               54, 102
               

               Conread position:
               409-868
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 370
               

               Conread position:
               447-744
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               53, 149
               

               Conread position:
               458-876
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 317
               

               Conread position:
               486-876
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 7
               

               Conread position:
               492-876
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 274
               

               Conread position:
               512-876
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 259
               

               Conread position:
               538-876
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 233
               

               Conread position:
               604-873
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               604-876
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               64, 151
               

               Conread position:
               604-876
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               604-876
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               612-876
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               209
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               21, 8
               

               Conread position:
               641-869
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               29, 53
               

               Conread position:
               656-876
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               13, 66
               

               Conread position:
               676-876
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               30, 77
               

               Conread position:
               709-872
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               730-876
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               886-1039
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 0
               
Show alignments to all cow chromosomes.