Cow genome map

Conread name: Ss1.1-Pig4-TMW8039L19.5

Conread position: 3-383
Cow position: chr23:2573479-2573856 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 254
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 41

Conread position: 7-876
Cow position: chr23:4433645-4434558 (view UCSC Genome Browser custom track)
Alignm length: 926
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 92

Conread position: 7-876
Cow position: chr23:19951415-19950484 (view UCSC Genome Browser custom track)
Alignm length: 941
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 7-876
Cow position: chr23:20301380-20302312 (view UCSC Genome Browser custom track)
Alignm length: 943
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 25

Conread position: 10-876
Cow position: chr23:22148075-22147151 (view UCSC Genome Browser custom track)
Alignm length: 931
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 94

Conread position: 14-581
Cow position: chr23:14975587-14974984 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 392
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 50, 84

Conread position: 19-876
Cow position: chr23:1025832-1024961 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 628
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 80

Conread position: 55-357
Cow position: chr23:810379-810677 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 217
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 9, 44

Conread position: 68-876
Cow position: chr23:28216523-28217389 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 15

Conread position: 78-674
Cow position: chr23:31595894-31595288 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 19

Conread position: 103-876
Cow position: chr23:5875452-5874675 (view UCSC Genome Browser custom track)
Alignm length: 812
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 32

Conread position: 145-876
Cow position: chr23:3012973-3013745 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 235

Conread position: 149-872
Cow position: chr23:34174539-34175275 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 466
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 30, 67

Conread position: 154-759
Cow position: chr23:19017067-19017675 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 398
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 85, 50

Conread position: 156-528
Cow position: chr23:2756853-2757224 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 253
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 145, 8

Conread position: 156-581
Cow position: chr23:14966601-14966188 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 302
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 67, 45

Conread position: 158-504
Cow position: chr23:15176404-15176751 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 242
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 9, 62

Conread position: 158-676
Cow position: chr23:1140917-1141444 (view UCSC Genome Browser custom track)
Alignm length: 547
Alignm identity: 357
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 182, 11

Conread position: 158-869
Cow position: chr23:15524973-15525702 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 129

Conread position: 158-869
Cow position: chr23:19488882-19489634 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-869
Cow position: chr23:28912762-28913489 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 136

Conread position: 158-876
Cow position: chr23:4641270-4640525 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-876
Cow position: chr23:4815433-4816174 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 59

Conread position: 158-876
Cow position: chr23:15220543-15219793 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 135

Conread position: 158-876
Cow position: chr23:36032021-36031274 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 60

Conread position: 161-876
Cow position: chr23:4509450-4510176 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 138

Conread position: 161-876
Cow position: chr23:19333052-19332308 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 53

Conread position: 162-876
Cow position: chr23:3882338-3881606 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 55

Conread position: 164-862
Cow position: chr23:2339763-2340479 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 50

Conread position: 164-876
Cow position: chr23:2796200-2795466 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 96

Conread position: 164-876
Cow position: chr23:16617478-16616750 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 37

Conread position: 166-704
Cow position: chr23:2765984-2765460 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 26

Conread position: 166-869
Cow position: chr23:11777846-11778562 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 51

Conread position: 166-876
Cow position: chr23:2027764-2027020 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 33

Conread position: 175-874
Cow position: chr23:989260-988549 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 63

Conread position: 176-876
Cow position: chr23:27398874-27399603 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 41

Conread position: 196-876
Cow position: chr23:4276357-4277054 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 8

Conread position: 197-518
Cow position: chr23:2045428-2045743 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 233
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 22, 37

Conread position: 197-698
Cow position: chr23:2715727-2716262 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 201-445
Cow position: chr23:8981413-8981183 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 153, 0

Conread position: 281-876
Cow position: chr23:4359299-4359929 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 9

Conread position: 366-779
Cow position: chr23:22876070-22875632 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 302
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 133

Conread position: 366-869
Cow position: chr23:967790-967253 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 415

Conread position: 372-856
Cow position: chr23:7273225-7273715 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 109

Conread position: 384-675
Cow position: chr23:1330710-1330399 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 228
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 69, 215

Conread position: 388-876
Cow position: chr23:5779506-5778988 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 294

Conread position: 396-876
Cow position: chr23:2574153-2574635 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 338
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 86

Conread position: 398-871
Cow position: chr23:16481761-16481278 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 331
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 54, 102

Conread position: 409-868
Cow position: chr23:30636701-30636210 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 370

Conread position: 447-744
Cow position: chr23:8980846-8980525 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 53, 149

Conread position: 458-876
Cow position: chr23:31446468-31446914 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 317

Conread position: 486-876
Cow position: chr23:2313551-2313139 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 7

Conread position: 492-876
Cow position: chr23:4888372-4888774 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 274

Conread position: 512-876
Cow position: chr23:15176786-15177173 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 259

Conread position: 538-876
Cow position: chr23:2524454-2524098 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 233

Conread position: 604-873
Cow position: chr23:14974743-14974465 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 201
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 28, 0

Conread position: 604-876
Cow position: chr23:14965927-14965653 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 200
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 64, 151

Conread position: 604-876
Cow position: chr23:20156414-20156118 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 0

Conread position: 604-876
Cow position: chr23:31591988-31591704 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 17, 32

Conread position: 612-876
Cow position: chr23:25684231-25683962 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 21, 8

Conread position: 641-869
Cow position: chr23:2716259-2716480 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 169
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 53

Conread position: 656-876
Cow position: chr23:29474682-29474458 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 13, 66

Conread position: 676-876
Cow position: chr23:2757487-2757693 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 30, 77

Conread position: 709-872
Cow position: chr23:10903462-10903623 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 730-876
Cow position: chr23:31595284-31595137 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 23

Conread position: 886-1039
Cow position: chr23:1402616-1402471 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 26, 0

Show alignments to all cow chromosomes.