Cow genome map

Conread name: Ss1.1-Pig4-TMW8039L19.5

Conread position: 1-876
Cow position:
Alignm length: 930
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 16

Conread position: 7-346
Cow position:
Alignm length: 342
Alignm identity: 217
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 29, 78

Conread position: 7-396
Cow position:
Alignm length: 403
Alignm identity: 268
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 37, 23

Conread position: 7-848
Cow position:
Alignm length: 906
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 92

Conread position: 7-876
Cow position:
Alignm length: 941
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 40

Conread position: 7-876
Cow position:
Alignm length: 944
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 40

Conread position: 7-876
Cow position:
Alignm length: 961
Alignm identity: 631
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 10-876
Cow position:
Alignm length: 916
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 87

Conread position: 30-876
Cow position:
Alignm length: 887
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 71

Conread position: 44-574
Cow position:
Alignm length: 552
Alignm identity: 359
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 36

Conread position: 44-876
Cow position:
Alignm length: 877
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 45-868
Cow position:
Alignm length: 863
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 54

Conread position: 45-876
Cow position:
Alignm length: 904
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 53

Conread position: 48-876
Cow position:
Alignm length: 865
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 50

Conread position: 60-612
Cow position:
Alignm length: 586
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 30

Conread position: 72-612
Cow position:
Alignm length: 554
Alignm identity: 363
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 14, 26

Conread position: 97-332
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 155, 50

Conread position: 97-510
Cow position:
Alignm length: 421
Alignm identity: 270
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 130, 32

Conread position: 145-545
Cow position:
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 7

Conread position: 145-727
Cow position:
Alignm length: 619
Alignm identity: 395
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 23, 182

Conread position: 149-592
Cow position:
Alignm length: 455
Alignm identity: 291
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 70, 9

Conread position: 151-450
Cow position:
Alignm length: 304
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 72, 66

Conread position: 151-876
Cow position:
Alignm length: 759
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 44

Conread position: 152-868
Cow position:
Alignm length: 746
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 64

Conread position: 154-874
Cow position:
Alignm length: 768
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 158

Conread position: 156-876
Cow position:
Alignm length: 766
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 6

Conread position: 158-417
Cow position:
Alignm length: 268
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 59

Conread position: 158-868
Cow position:
Alignm length: 749
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 111

Conread position: 158-876
Cow position:
Alignm length: 754
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 18

Conread position: 158-876
Cow position:
Alignm length: 771
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 58

Conread position: 164-594
Cow position:
Alignm length: 446
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 20

Conread position: 164-607
Cow position:
Alignm length: 482
Alignm identity: 314
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 350

Conread position: 164-838
Cow position:
Alignm length: 710
Alignm identity: 450
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 67, 16

Conread position: 164-860
Cow position:
Alignm length: 733
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 362

Conread position: 164-875
Cow position:
Alignm length: 734
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 364, 50

Conread position: 164-876
Cow position:
Alignm length: 739
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 53

Conread position: 165-612
Cow position:
Alignm length: 456
Alignm identity: 285
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 140, 8

Conread position: 166-362
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 53, 89

Conread position: 167-536
Cow position:
Alignm length: 380
Alignm identity: 257
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 100, 50

Conread position: 179-876
Cow position:
Alignm length: 736
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 142

Conread position: 184-794
Cow position:
Alignm length: 646
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 189

Conread position: 184-861
Cow position:
Alignm length: 710
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 33

Conread position: 185-788
Cow position:
Alignm length: 640
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 32

Conread position: 185-876
Cow position:
Alignm length: 723
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 113

Conread position: 196-876
Cow position:
Alignm length: 698
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 21

Conread position: 198-868
Cow position:
Alignm length: 716
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 95

Conread position: 227-876
Cow position:
Alignm length: 675
Alignm identity: 427
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 5, 24

Conread position: 253-876
Cow position:
Alignm length: 665
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 11

Conread position: 295-607
Cow position:
Alignm length: 339
Alignm identity: 225
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 295-876
Cow position:
Alignm length: 627
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 496

Conread position: 302-853
Cow position:
Alignm length: 591
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 86

Conread position: 302-876
Cow position:
Alignm length: 618
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 486

Conread position: 302-876
Cow position:
Alignm length: 609
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 29

Conread position: 309-876
Cow position:
Alignm length: 610
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 347-876
Cow position:
Alignm length: 551
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 27

Conread position: 348-680
Cow position:
Alignm length: 353
Alignm identity: 239
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 29, 69

Conread position: 366-607
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 160, 130

Conread position: 380-867
Cow position:
Alignm length: 501
Alignm identity: 323
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 66, 24

Conread position: 380-876
Cow position:
Alignm length: 525
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 104

Conread position: 382-876
Cow position:
Alignm length: 530
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 398

Conread position: 398-876
Cow position:
Alignm length: 506
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 114

Conread position: 411-879
Cow position:
Alignm length: 497
Alignm identity: 317
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 44, 75

Conread position: 458-850
Cow position:
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 33

Conread position: 458-876
Cow position:
Alignm length: 448
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 317

Conread position: 543-876
Cow position:
Alignm length: 354
Alignm identity: 254
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 52, 14

Conread position: 557-876
Cow position:
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 210

Conread position: 591-853
Cow position:
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 8

Conread position: 591-876
Cow position:
Alignm length: 296
Alignm identity: 216
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 61, 8

Conread position: 602-876
Cow position:
Alignm length: 283
Alignm identity: 202
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 75, 18

Conread position: 622-820
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 94, 64

Conread position: 622-876
Cow position:
Alignm length: 264
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 229

Conread position: 630-876
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 39, 125

Conread position: 636-833
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 122

Conread position: 642-875
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 28, 112

Conread position: 676-876
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 5, 76

Conread position: 711-876
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 50, 36

Conread position: 739-876
Cow position:
Alignm length: 139
Alignm identity: 112
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 22, 8

Conread position: 887-1065
Cow position:
Alignm length: 181
Alignm identity: 132
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 169, 21

Conread position: 900-1054
Cow position:
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 900-1055
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.