Cow genome map

Conread name: Ss1.1-Pig4-TMW8039L19.5

Conread position: 1-563
Cow position:
Alignm length: 603
Alignm identity: 391
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 7, 99

Conread position: 1-874
Cow position:
Alignm length: 924
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 100

Conread position: 7-874
Cow position:
Alignm length: 933
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 92

Conread position: 29-594
Cow position:
Alignm length: 589
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 71

Conread position: 29-876
Cow position:
Alignm length: 881
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 36

Conread position: 44-876
Cow position:
Alignm length: 871
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 37

Conread position: 56-867
Cow position:
Alignm length: 874
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 57-876
Cow position:
Alignm length: 883
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 27

Conread position: 145-876
Cow position:
Alignm length: 788
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 270

Conread position: 158-876
Cow position:
Alignm length: 749
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-876
Cow position:
Alignm length: 754
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 59

Conread position: 159-876
Cow position:
Alignm length: 748
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 161-873
Cow position:
Alignm length: 754
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 38

Conread position: 164-822
Cow position:
Alignm length: 690
Alignm identity: 412
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 50

Conread position: 167-876
Cow position:
Alignm length: 748
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 211

Conread position: 167-876
Cow position:
Alignm length: 743
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 97

Conread position: 168-860
Cow position:
Alignm length: 739
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 70

Conread position: 176-564
Cow position:
Alignm length: 407
Alignm identity: 269
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 47, 41

Conread position: 176-876
Cow position:
Alignm length: 733
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 41

Conread position: 177-794
Cow position:
Alignm length: 651
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 60

Conread position: 196-877
Cow position:
Alignm length: 733
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 255

Conread position: 197-465
Cow position:
Alignm length: 277
Alignm identity: 189
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 159, 33

Conread position: 197-876
Cow position:
Alignm length: 715
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 20

Conread position: 254-876
Cow position:
Alignm length: 660
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 37

Conread position: 255-380
Cow position:
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 295-876
Cow position:
Alignm length: 624
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 342

Conread position: 299-874
Cow position:
Alignm length: 603
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 76

Conread position: 302-876
Cow position:
Alignm length: 622
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 147

Conread position: 302-876
Cow position:
Alignm length: 611
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 190

Conread position: 303-704
Cow position:
Alignm length: 424
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 126

Conread position: 314-850
Cow position:
Alignm length: 577
Alignm identity: 370
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 18, 11

Conread position: 318-876
Cow position:
Alignm length: 590
Alignm identity: 379
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 31, 8

Conread position: 366-740
Cow position:
Alignm length: 404
Alignm identity: 281
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 88, 165

Conread position: 384-869
Cow position:
Alignm length: 520
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 395

Conread position: 404-876
Cow position:
Alignm length: 507
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 377

Conread position: 487-874
Cow position:
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 9

Conread position: 562-820
Cow position:
Alignm length: 283
Alignm identity: 207
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 34, 207

Conread position: 606-869
Cow position:
Alignm length: 273
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 149

Conread position: 631-872
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 19, 27

Conread position: 644-876
Cow position:
Alignm length: 247
Alignm identity: 188
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 33, 58

Conread position: 672-876
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 87

Conread position: 706-872
Cow position:
Alignm length: 168
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 55, 41

Conread position: 706-876
Cow position:
Alignm length: 173
Alignm identity: 135
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 55, 41

Show alignments to all cow chromosomes.