Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039L19.5
        

               Conread position:
               7-514
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 91
               

               Conread position:
               12-589
               

               Cow position:
               
               

               Alignm length:
               603
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 89
               

               Conread position:
               32-876
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               581
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 64
               

               Conread position:
               35-876
               

               Cow position:
               
               

               Alignm length:
               907
               

               Alignm identity:
               609
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               45-876
               

               Cow position:
               
               

               Alignm length:
               891
               

               Alignm identity:
               596
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               56-873
               

               Cow position:
               
               

               Alignm length:
               875
               

               Alignm identity:
               567
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 28
               

               Conread position:
               145-876
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               531
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 674
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               160-509
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               59, 156
               

               Conread position:
               160-685
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               391
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               59, 156
               

               Conread position:
               164-536
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               59, 53
               

               Conread position:
               164-876
               

               Cow position:
               
               

               Alignm length:
               751
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 53
               

               Conread position:
               166-527
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               251
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               57, 42
               

               Conread position:
               166-868
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 127
               

               Conread position:
               167-704
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 79
               

               Conread position:
               178-403
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               41, 110
               

               Conread position:
               236-674
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 31
               

               Conread position:
               282-588
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               295-876
               

               Cow position:
               
               

               Alignm length:
               616
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 332
               

               Conread position:
               298-873
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 430
               

               Conread position:
               298-876
               

               Cow position:
               
               

               Alignm length:
               609
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 74
               

               Conread position:
               302-658
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               73, 306
               

               Conread position:
               340-769
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               310
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               100, 21
               

               Conread position:
               346-868
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 12
               

               Conread position:
               358-585
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 157
               

               Conread position:
               365-874
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 11
               

               Conread position:
               372-876
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               374
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 43
               

               Conread position:
               375-876
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 90
               

               Conread position:
               387-876
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 318
               

               Conread position:
               393-876
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               319
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               112, 57
               

               Conread position:
               459-831
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               282
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               41, 153
               

               Conread position:
               488-869
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               260
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               28, 177
               

               Conread position:
               527-876
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 42
               

               Conread position:
               577-876
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               100, 72
               

               Conread position:
               600-803
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               74, 66
               

               Conread position:
               706-876
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               55, 41
               

               Conread position:
               706-876
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               55, 41
               

               Conread position:
               728-876
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               34, 13
               

               Conread position:
               730-876
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               44, 15
               

               Conread position:
               730-876
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               732-876
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               29, 15
               

               Conread position:
               735-876
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               740-876
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               750-876
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               750-876
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               11, 74
               

               Conread position:
               753-876
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               903-1061
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               153, 43
               
Show alignments to all cow chromosomes.