Cow genome map

Conread name: Ss1.1-Pig4-TMW8039L19.5

Conread position: 7-872
Cow position: chr27:26556773-26555909 (view UCSC Genome Browser custom track)
Alignm length: 899
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 81

Conread position: 7-876
Cow position: chr27:2363910-2364849 (view UCSC Genome Browser custom track)
Alignm length: 949
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 78

Conread position: 14-831
Cow position: chr27:25805669-25804829 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 83

Conread position: 28-869
Cow position: chr27:1208578-1209444 (view UCSC Genome Browser custom track)
Alignm length: 883
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 53

Conread position: 29-876
Cow position: chr27:16438575-16439427 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 36

Conread position: 35-869
Cow position: chr27:14461227-14460364 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 9

Conread position: 40-876
Cow position: chr27:27662128-27662999 (view UCSC Genome Browser custom track)
Alignm length: 885
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 41

Conread position: 142-876
Cow position: chr27:892545-893306 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 198

Conread position: 144-690
Cow position: chr27:13897529-13898099 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 370
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 109, 151

Conread position: 145-354
Cow position: chr27:15331346-15331554 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 160
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 85, 27

Conread position: 145-868
Cow position: chr27:26324152-26324906 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 72

Conread position: 146-868
Cow position: chr27:28890071-28890816 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 453
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 16, 69

Conread position: 153-471
Cow position: chr27:5985753-5985427 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 228
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 66, 28

Conread position: 158-536
Cow position: chr27:11472042-11471656 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 258
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 59

Conread position: 158-686
Cow position: chr27:25116598-25117147 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 363
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 8, 60

Conread position: 158-869
Cow position: chr27:5910216-5910955 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 147

Conread position: 158-869
Cow position: chr27:23334514-23335254 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-876
Cow position: chr27:9993840-9993106 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 6

Conread position: 159-826
Cow position: chr27:25999699-25999018 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 28

Conread position: 164-876
Cow position: chr27:16035066-16034295 (view UCSC Genome Browser custom track)
Alignm length: 776
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 241

Conread position: 166-453
Cow position: chr27:15639152-15638865 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 53, 127

Conread position: 166-876
Cow position: chr27:25003140-25002437 (view UCSC Genome Browser custom track)
Alignm length: 737
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 144

Conread position: 184-876
Cow position: chr27:27051066-27051775 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 497
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 33

Conread position: 220-380
Cow position: chr27:15279212-15279052 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 295-876
Cow position: chr27:15540806-15541428 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 493

Conread position: 401-822
Cow position: chr27:3996775-3996330 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 297
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 54, 85

Conread position: 409-874
Cow position: chr27:15278464-15277972 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 396

Conread position: 474-876
Cow position: chr27:26226975-26227392 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 271
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 55, 38

Conread position: 540-874
Cow position: chr27:6006770-6007118 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 48, 124

Conread position: 656-875
Cow position: chr27:16432296-16432518 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 168
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 657-876
Cow position: chr27:27753324-27753097 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 104

Conread position: 706-876
Cow position: chr27:26035126-26034956 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 709-864
Cow position: chr27:27197437-27197279 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 44

Conread position: 712-876
Cow position: chr27:15638420-15638256 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 50, 35

Conread position: 897-1054
Cow position: chr27:8561818-8561969 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 50, 0

Show alignments to all cow chromosomes.