Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039L19.5
        

               Conread position:
               1-536
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 98
               

               Conread position:
               1-822
               

               Cow position:
               
               

               Alignm length:
               873
               

               Alignm identity:
               634
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 100
               

               Conread position:
               1-873
               

               Cow position:
               
               

               Alignm length:
               918
               

               Alignm identity:
               613
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 50
               

               Conread position:
               2-876
               

               Cow position:
               
               

               Alignm length:
               928
               

               Alignm identity:
               669
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 43
               

               Conread position:
               7-556
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 93
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               941
               

               Alignm identity:
               605
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               909
               

               Alignm identity:
               634
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               899
               

               Alignm identity:
               635
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 93
               

               Conread position:
               7-877
               

               Cow position:
               
               

               Alignm length:
               932
               

               Alignm identity:
               594
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 11
               

               Conread position:
               12-876
               

               Cow position:
               
               

               Alignm length:
               898
               

               Alignm identity:
               643
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 87
               

               Conread position:
               44-869
               

               Cow position:
               
               

               Alignm length:
               865
               

               Alignm identity:
               585
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               54-876
               

               Cow position:
               
               

               Alignm length:
               874
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               69-876
               

               Cow position:
               
               

               Alignm length:
               844
               

               Alignm identity:
               571
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 29
               

               Conread position:
               72-876
               

               Cow position:
               
               

               Alignm length:
               822
               

               Alignm identity:
               569
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 26
               

               Conread position:
               84-703
               

               Cow position:
               
               

               Alignm length:
               649
               

               Alignm identity:
               443
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 13
               

               Conread position:
               103-876
               

               Cow position:
               
               

               Alignm length:
               850
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 34
               

               Conread position:
               110-831
               

               Cow position:
               
               

               Alignm length:
               769
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 27
               

               Conread position:
               141-876
               

               Cow position:
               
               

               Alignm length:
               780
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 116
               

               Conread position:
               144-514
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               54, 25
               

               Conread position:
               144-869
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 77
               

               Conread position:
               144-876
               

               Cow position:
               
               

               Alignm length:
               774
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               149-698
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               362
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               223, 65
               

               Conread position:
               156-518
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               67, 6
               

               Conread position:
               157-876
               

               Cow position:
               
               

               Alignm length:
               760
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 19
               

               Conread position:
               158-517
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               9, 136
               

               Conread position:
               158-518
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-536
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               270
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-581
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               286
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-673
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 59
               

               Conread position:
               158-725
               

               Cow position:
               
               

               Alignm length:
               604
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-768
               

               Cow position:
               
               

               Alignm length:
               647
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 126
               

               Conread position:
               158-859
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 37
               

               Conread position:
               158-869
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 6
               

               Conread position:
               158-869
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               516
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               158-869
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               523
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 11
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 6
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               160-876
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               550
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 31
               

               Conread position:
               164-765
               

               Cow position:
               
               

               Alignm length:
               637
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 72
               

               Conread position:
               164-876
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 46
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 48
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               167-874
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 147
               

               Conread position:
               167-876
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 50
               

               Conread position:
               176-612
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               49, 38
               

               Conread position:
               197-876
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 20
               

               Conread position:
               242-517
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               96, 74
               

               Conread position:
               281-876
               

               Cow position:
               
               

               Alignm length:
               641
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 493
               

               Conread position:
               295-876
               

               Cow position:
               
               

               Alignm length:
               627
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 496
               

               Conread position:
               295-876
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 494
               

               Conread position:
               317-876
               

               Cow position:
               
               

               Alignm length:
               595
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 67
               

               Conread position:
               398-876
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 162
               

               Conread position:
               409-869
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 172
               

               Conread position:
               414-876
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               332
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               32, 70
               

               Conread position:
               461-876
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 47
               

               Conread position:
               467-876
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 13
               

               Conread position:
               524-876
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               265
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               23, 141
               

               Conread position:
               531-876
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 239
               

               Conread position:
               540-868
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               50, 129
               

               Conread position:
               541-876
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               64, 99
               

               Conread position:
               562-871
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               585-910
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 103
               

               Conread position:
               604-869
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               73, 151
               

               Conread position:
               604-869
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               103, 46
               

               Conread position:
               609-876
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               65, 41
               

               Conread position:
               641-827
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               36, 114
               

               Conread position:
               641-876
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               36, 114
               

               Conread position:
               669-876
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 88
               

               Conread position:
               706-869
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               135
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               706-876
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               715-876
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               46, 32
               

               Conread position:
               715-876
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               46, 32
               

               Conread position:
               715-876
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               46, 32
               

               Conread position:
               734-876
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               770-876
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               886-1042
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               899-1065
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               154, 47
               

               Conread position:
               901-1065
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               907-1051
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.