Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039L19.5
        

               Conread position:
               1-504
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 100
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               945
               

               Alignm identity:
               617
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 40
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               896
               

               Alignm identity:
               633
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 15
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               937
               

               Alignm identity:
               599
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 77
               

               Conread position:
               10-479
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               311
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               36, 82
               

               Conread position:
               10-479
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               310
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               36, 82
               

               Conread position:
               10-869
               

               Cow position:
               
               

               Alignm length:
               914
               

               Alignm identity:
               602
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 95
               

               Conread position:
               29-373
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 71
               

               Conread position:
               43-876
               

               Cow position:
               
               

               Alignm length:
               882
               

               Alignm identity:
               565
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               45-698
               

               Cow position:
               
               

               Alignm length:
               707
               

               Alignm identity:
               444
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               46-607
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 35
               

               Conread position:
               47-876
               

               Cow position:
               
               

               Alignm length:
               872
               

               Alignm identity:
               585
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               54-876
               

               Cow position:
               
               

               Alignm length:
               864
               

               Alignm identity:
               579
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               72-504
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 26
               

               Conread position:
               138-876
               

               Cow position:
               
               

               Alignm length:
               767
               

               Alignm identity:
               470
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 43
               

               Conread position:
               144-876
               

               Cow position:
               
               

               Alignm length:
               765
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 31
               

               Conread position:
               154-868
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 30
               

               Conread position:
               156-864
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 8
               

               Conread position:
               156-876
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               522
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               158-869
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               533
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 18
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               759
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               766
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-877
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               159-876
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 134
               

               Conread position:
               160-876
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               509
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 343
               

               Conread position:
               164-514
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               51, 176
               

               Conread position:
               164-575
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               291, 53
               

               Conread position:
               164-876
               

               Cow position:
               
               

               Alignm length:
               739
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 29
               

               Conread position:
               166-847
               

               Cow position:
               
               

               Alignm length:
               723
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 206
               

               Conread position:
               166-874
               

               Cow position:
               
               

               Alignm length:
               741
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 48
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               747
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 124
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               524
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 28
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               742
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 48
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               167-876
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 217
               

               Conread position:
               167-876
               

               Cow position:
               
               

               Alignm length:
               757
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 88
               

               Conread position:
               176-850
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 195
               

               Conread position:
               176-862
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 41
               

               Conread position:
               176-869
               

               Cow position:
               
               

               Alignm length:
               736
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 42
               

               Conread position:
               176-876
               

               Cow position:
               
               

               Alignm length:
               743
               

               Alignm identity:
               498
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 160
               

               Conread position:
               176-876
               

               Cow position:
               
               

               Alignm length:
               740
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 41
               

               Conread position:
               178-876
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 115
               

               Conread position:
               190-876
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               183, 33
               

               Conread position:
               197-876
               

               Cow position:
               
               

               Alignm length:
               719
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 20
               

               Conread position:
               295-862
               

               Cow position:
               
               

               Alignm length:
               611
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               295-876
               

               Cow position:
               
               

               Alignm length:
               625
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 123
               

               Conread position:
               295-876
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               295-876
               

               Cow position:
               
               

               Alignm length:
               629
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 182
               

               Conread position:
               302-877
               

               Cow position:
               
               

               Alignm length:
               620
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 385
               

               Conread position:
               313-875
               

               Cow position:
               
               

               Alignm length:
               602
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 57
               

               Conread position:
               336-742
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               345-660
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               236
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               376-874
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               344
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               82, 14
               

               Conread position:
               458-874
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               297
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               32, 315
               

               Conread position:
               467-853
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 13
               

               Conread position:
               493-870
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 286
               

               Conread position:
               493-876
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 276
               

               Conread position:
               540-874
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               254
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               45, 176
               

               Conread position:
               553-876
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               206
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               14, 203
               

               Conread position:
               607-876
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               70, 148
               

               Conread position:
               608-876
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 148
               

               Conread position:
               626-854
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               81, 133
               

               Conread position:
               627-788
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 128
               

               Conread position:
               627-876
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               46, 128
               

               Conread position:
               642-869
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               32, 66
               

               Conread position:
               706-875
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               55, 47
               

               Conread position:
               706-876
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               55, 41
               

               Conread position:
               706-876
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               142
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               55, 41
               

               Conread position:
               706-876
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               55, 41
               

               Conread position:
               709-876
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               52, 38
               

               Conread position:
               709-876
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               52, 38
               

               Conread position:
               735-876
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               747-869
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               101
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               899-1051
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 48
               
Show alignments to all cow chromosomes.