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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8039L19.5
        

               
Conread position:
               
1-765
               

               
Cow position:
               
chr3:39325819-39326603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
801
               

               
Alignm identity:
               
555
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 100
               

               
Conread position:
               
1-851
               

               
Cow position:
               
chr3:63006040-63005144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
906
               

               
Alignm identity:
               
625
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 100
               

               
Conread position:
               
4-607
               

               
Cow position:
               
chr3:19801548-19802164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
628
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 96
               

               
Conread position:
               
7-369
               

               
Cow position:
               
chr3:6781219-6781583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
7-707
               

               
Cow position:
               
chr3:52865626-52864897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 93
               

               
Conread position:
               
7-825
               

               
Cow position:
               
chr3:32623908-32623045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 78
               

               
Conread position:
               
7-876
               

               
Cow position:
               
chr3:41212652-41211710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
948
               

               
Alignm identity:
               
607
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
7-876
               

               
Cow position:
               
chr3:46678818-46677887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
937
               

               
Alignm identity:
               
610
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
7-876
               

               
Cow position:
               
chr3:49614877-49613950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
932
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
7-876
               

               
Cow position:
               
chr3:64028988-64028059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
942
               

               
Alignm identity:
               
625
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 78
               

               
Conread position:
               
10-509
               

               
Cow position:
               
chr3:17950795-17951303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 88
               

               
Conread position:
               
10-765
               

               
Cow position:
               
chr3:49676879-49677667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
803
               

               
Alignm identity:
               
553
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 87
               

               
Conread position:
               
10-876
               

               
Cow position:
               
chr3:46862200-46861276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
935
               

               
Alignm identity:
               
599
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
16-876
               

               
Cow position:
               
chr3:56341307-56340400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
914
               

               
Alignm identity:
               
601
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 191
               

               
Conread position:
               
25-518
               

               
Cow position:
               
chr3:46502170-46502675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
14, 80
               

               
Conread position:
               
25-876
               

               
Cow position:
               
chr3:42431365-42432258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
906
               

               
Alignm identity:
               
603
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
29-874
               

               
Cow position:
               
chr3:55230532-55229676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
886
               

               
Alignm identity:
               
601
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 36
               

               
Conread position:
               
29-876
               

               
Cow position:
               
chr3:5048009-5047157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
885
               

               
Alignm identity:
               
603
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
29-876
               

               
Cow position:
               
chr3:5830452-5829601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
880
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 55
               

               
Conread position:
               
32-876
               

               
Cow position:
               
chr3:34396875-34396054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
589
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 50
               

               
Conread position:
               
32-876
               

               
Cow position:
               
chr3:42580778-42579940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
880
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 58
               

               
Conread position:
               
35-876
               

               
Cow position:
               
chr3:10238810-10239676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
881
               

               
Alignm identity:
               
596
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 9
               

               
Conread position:
               
35-876
               

               
Cow position:
               
chr3:14440599-14439734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
889
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 49
               

               
Conread position:
               
45-596
               

               
Cow position:
               
chr3:36116801-36117390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
45-750
               

               
Cow position:
               
chr3:40340827-40340068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
22, 39
               

               
Conread position:
               
45-823
               

               
Cow position:
               
chr3:72704331-72705172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
847
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
45-876
               

               
Cow position:
               
chr3:3522149-3523048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
904
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
45-876
               

               
Cow position:
               
chr3:64649758-64650652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
902
               

               
Alignm identity:
               
590
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
46-322
               

               
Cow position:
               
chr3:19938059-19938324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 38
               

               
Conread position:
               
47-876
               

               
Cow position:
               
chr3:2653300-2654133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
860
               

               
Alignm identity:
               
593
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 36
               

               
Conread position:
               
48-876
               

               
Cow position:
               
chr3:21183506-21182657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
588
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
56-876
               

               
Cow position:
               
chr3:15989882-15989008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
889
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 28
               

               
Conread position:
               
56-916
               

               
Cow position:
               
chr3:37968235-37969145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
916
               

               
Alignm identity:
               
594
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
72-876
               

               
Cow position:
               
chr3:2633135-2633952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
838
               

               
Alignm identity:
               
579
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 26
               

               
Conread position:
               
78-876
               

               
Cow position:
               
chr3:207938-207134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
838
               

               
Alignm identity:
               
572
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
103-875
               

               
Cow position:
               
chr3:47082451-47081632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
834
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
136-876
               

               
Cow position:
               
chr3:54782817-54783566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
768
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
28, 14
               

               
Conread position:
               
143-876
               

               
Cow position:
               
chr3:6684721-6685488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 221
               

               
Conread position:
               
144-794
               

               
Cow position:
               
chr3:47273702-47273048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
144-876
               

               
Cow position:
               
chr3:3053883-3054625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
144-876
               

               
Cow position:
               
chr3:72629333-72630096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 162
               

               
Conread position:
               
145-372
               

               
Cow position:
               
chr3:57500260-57500028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
174, 23
               

               
Conread position:
               
145-857
               

               
Cow position:
               
chr3:22335128-22335901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
513
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 405
               

               
Conread position:
               
146-876
               

               
Cow position:
               
chr3:14634824-14634085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 290
               

               
Conread position:
               
147-869
               

               
Cow position:
               
chr3:48061555-48060812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
756
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
149-596
               

               
Cow position:
               
chr3:5996601-5996142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
74, 68
               

               
Conread position:
               
149-872
               

               
Cow position:
               
chr3:56096851-56097552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 148
               

               
Conread position:
               
151-869
               

               
Cow position:
               
chr3:34031624-34030879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
521
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 18
               

               
Conread position:
               
152-749
               

               
Cow position:
               
chr3:2909815-2909194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 201
               

               
Conread position:
               
152-876
               

               
Cow position:
               
chr3:15177588-15178338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
765
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 190
               

               
Conread position:
               
154-517
               

               
Cow position:
               
chr3:14755222-14754849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
183, 63
               

               
Conread position:
               
154-612
               

               
Cow position:
               
chr3:13513900-13513459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
65, 78
               

               
Conread position:
               
158-505
               

               
Cow position:
               
chr3:53515011-53515362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
9, 136
               

               
Conread position:
               
158-869
               

               
Cow position:
               
chr3:23292127-23291387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 60
               

               
Conread position:
               
158-869
               

               
Cow position:
               
chr3:30313810-30314586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
780
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 59
               

               
Conread position:
               
158-869
               

               
Cow position:
               
chr3:43040408-43039686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 59
               

               
Conread position:
               
158-876
               

               
Cow position:
               
chr3:593877-594602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
744
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 59
               

               
Conread position:
               
158-876
               

               
Cow position:
               
chr3:2711677-2710934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 134
               

               
Conread position:
               
158-876
               

               
Cow position:
               
chr3:18810782-18811530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 135
               

               
Conread position:
               
158-876
               

               
Cow position:
               
chr3:36882631-36881895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
752
               

               
Alignm identity:
               
509
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 129
               

               
Conread position:
               
158-876
               

               
Cow position:
               
chr3:57485445-57484702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
757
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 136
               

               
Conread position:
               
158-876
               

               
Cow position:
               
chr3:75041868-75041141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
746
               

               
Alignm identity:
               
507
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 59
               

               
Conread position:
               
158-876
               

               
Cow position:
               
chr3:78028133-78027383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 59
               

               
Conread position:
               
159-876
               

               
Cow position:
               
chr3:40822651-40823414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
530
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 58
               

               
Conread position:
               
159-876
               

               
Cow position:
               
chr3:59860643-59861393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
515
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 168
               

               
Conread position:
               
160-395
               

               
Cow position:
               
chr3:27905985-27905755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
160-835
               

               
Cow position:
               
chr3:36099429-36098719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
443
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
160-869
               

               
Cow position:
               
chr3:64358891-64358148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 158
               

               
Conread position:
               
160-876
               

               
Cow position:
               
chr3:54865431-54864672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 223
               

               
Conread position:
               
164-403
               

               
Cow position:
               
chr3:26948613-26948848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
46, 180
               

               
Conread position:
               
164-441
               

               
Cow position:
               
chr3:43193420-43193143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
59, 53
               

               
Conread position:
               
164-745
               

               
Cow position:
               
chr3:56650971-56650372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 53
               

               
Conread position:
               
164-840
               

               
Cow position:
               
chr3:32843143-32842443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
459
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
44, 30
               

               
Conread position:
               
164-876
               

               
Cow position:
               
chr3:18543148-18542381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
771
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 87
               

               
Conread position:
               
164-876
               

               
Cow position:
               
chr3:34094107-34093421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
164-876
               

               
Cow position:
               
chr3:38865691-38866422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 173
               

               
Conread position:
               
164-877
               

               
Cow position:
               
chr3:24592324-24591611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
517
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
165-372
               

               
Cow position:
               
chr3:48329701-48329903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
55, 132
               

               
Conread position:
               
166-723
               

               
Cow position:
               
chr3:36691886-36691318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
57, 51
               

               
Conread position:
               
166-876
               

               
Cow position:
               
chr3:5882826-5883566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 51
               

               
Conread position:
               
166-876
               

               
Cow position:
               
chr3:5954882-5954159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
740
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 51
               

               
Conread position:
               
166-876
               

               
Cow position:
               
chr3:64018076-64017337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
520
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 51
               

               
Conread position:
               
167-876
               

               
Cow position:
               
chr3:9716112-9716841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 80
               

               
Conread position:
               
167-876
               

               
Cow position:
               
chr3:66118963-66119682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 81
               

               
Conread position:
               
175-566
               

               
Cow position:
               
chr3:83700836-83700448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
51, 39
               

               
Conread position:
               
175-874
               

               
Cow position:
               
chr3:65584302-65583598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
733
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
51, 41
               

               
Conread position:
               
175-876
               

               
Cow position:
               
chr3:31354935-31354238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 42
               

               
Conread position:
               
176-380
               

               
Cow position:
               
chr3:44255664-44255463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
176-876
               

               
Cow position:
               
chr3:31898645-31897950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
728
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
177-869
               

               
Cow position:
               
chr3:69932698-69933414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
730
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 40
               

               
Conread position:
               
177-876
               

               
Cow position:
               
chr3:21946106-21945380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 7
               

               
Conread position:
               
177-876
               

               
Cow position:
               
chr3:30928983-30929670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
272, 40
               

               
Conread position:
               
184-539
               

               
Cow position:
               
chr3:66637363-66637714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 180
               

               
Conread position:
               
184-876
               

               
Cow position:
               
chr3:18357568-18356860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 172
               

               
Conread position:
               
196-876
               

               
Cow position:
               
chr3:50128557-50127853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
712
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 36
               

               
Conread position:
               
203-518
               

               
Cow position:
               
chr3:18464435-18464109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 85
               

               
Conread position:
               
228-771
               

               
Cow position:
               
chr3:49545818-49545260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 63
               

               
Conread position:
               
248-874
               

               
Cow position:
               
chr3:3979754-3980415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
667
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 166
               

               
Conread position:
               
266-876
               

               
Cow position:
               
chr3:70084240-70083625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
241, 108
               

               
Conread position:
               
288-876
               

               
Cow position:
               
chr3:45032142-45032768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
290-876
               

               
Cow position:
               
chr3:19878063-19878685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 142
               

               
Conread position:
               
293-876
               

               
Cow position:
               
chr3:48231567-48230984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 24
               

               
Conread position:
               
295-850
               

               
Cow position:
               
chr3:4285291-4285887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 492
               

               
Conread position:
               
295-876
               

               
Cow position:
               
chr3:2916872-2917488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 172
               

               
Conread position:
               
295-876
               

               
Cow position:
               
chr3:17829244-17828622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 343
               

               
Conread position:
               
299-877
               

               
Cow position:
               
chr3:20871926-20871357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
302-876
               

               
Cow position:
               
chr3:24313890-24314496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 487
               

               
Conread position:
               
302-876
               

               
Cow position:
               
chr3:32146671-32146063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
613
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 201
               

               
Conread position:
               
302-876
               

               
Cow position:
               
chr3:66891542-66890934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 192
               

               
Conread position:
               
313-876
               

               
Cow position:
               
chr3:45869738-45869190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 59
               

               
Conread position:
               
316-876
               

               
Cow position:
               
chr3:57856162-57856764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 473
               

               
Conread position:
               
335-889
               

               
Cow position:
               
chr3:60210706-60210134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
6, 22
               

               
Conread position:
               
343-876
               

               
Cow position:
               
chr3:53410391-53410939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
6, 87
               

               
Conread position:
               
346-876
               

               
Cow position:
               
chr3:36126870-36127418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
349-876
               

               
Cow position:
               
chr3:16072636-16073164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 39
               

               
Conread position:
               
364-869
               

               
Cow position:
               
chr3:17936576-17936045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 36
               

               
Conread position:
               
375-876
               

               
Cow position:
               
chr3:45775572-45775061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
76, 110
               

               
Conread position:
               
376-874
               

               
Cow position:
               
chr3:77474259-77474785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 69
               

               
Conread position:
               
376-876
               

               
Cow position:
               
chr3:6781886-6782411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 228
               

               
Conread position:
               
388-876
               

               
Cow position:
               
chr3:19943587-19944084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 113
               

               
Conread position:
               
395-869
               

               
Cow position:
               
chr3:3805893-3806359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 114
               

               
Conread position:
               
395-876
               

               
Cow position:
               
chr3:472068-472559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 100
               

               
Conread position:
               
397-869
               

               
Cow position:
               
chr3:19757443-19756939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 382
               

               
Conread position:
               
410-876
               

               
Cow position:
               
chr3:47179674-47179176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 369
               

               
Conread position:
               
447-876
               

               
Cow position:
               
chr3:50914881-50915331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 61
               

               
Conread position:
               
448-876
               

               
Cow position:
               
chr3:26949088-26949541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
469-876
               

               
Cow position:
               
chr3:58947050-58947485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 108
               

               
Conread position:
               
483-869
               

               
Cow position:
               
chr3:42630626-42631034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
46, 186
               

               
Conread position:
               
487-876
               

               
Cow position:
               
chr3:51940791-51940393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
45, 151
               

               
Conread position:
               
495-874
               

               
Cow position:
               
chr3:4026898-4027296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 272
               

               
Conread position:
               
495-875
               

               
Cow position:
               
chr3:80871528-80871921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 178
               

               
Conread position:
               
507-873
               

               
Cow position:
               
chr3:18463941-18463563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 67
               

               
Conread position:
               
542-876
               

               
Cow position:
               
chr3:66638413-66638767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 225
               

               
Conread position:
               
542-876
               

               
Cow position:
               
chr3:66990477-66990813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
50, 105
               

               
Conread position:
               
554-876
               

               
Cow position:
               
chr3:63242036-63241728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 53
               

               
Conread position:
               
572-772
               

               
Cow position:
               
chr3:57900919-57901139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 195
               

               
Conread position:
               
584-830
               

               
Cow position:
               
chr3:7323044-7323292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
585-876
               

               
Cow position:
               
chr3:17775828-17776113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 19
               

               
Conread position:
               
586-876
               

               
Cow position:
               
chr3:7158999-7158705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
591-850
               

               
Cow position:
               
chr3:36117412-36117677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 8
               

               
Conread position:
               
591-876
               

               
Cow position:
               
chr3:7168532-7168820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
76, 8
               

               
Conread position:
               
591-876
               

               
Cow position:
               
chr3:56321054-56321343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
85, 8
               

               
Conread position:
               
604-876
               

               
Cow position:
               
chr3:5995948-5995670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
604-876
               

               
Cow position:
               
chr3:14754548-14754270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
604-876
               

               
Cow position:
               
chr3:29594951-29595221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
71, 35
               

               
Conread position:
               
604-876
               

               
Cow position:
               
chr3:53515366-53515640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
74, 129
               

               
Conread position:
               
608-876
               

               
Cow position:
               
chr3:18859171-18859443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
62, 147
               

               
Conread position:
               
623-876
               

               
Cow position:
               
chr3:66619945-66620201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
51, 132
               

               
Conread position:
               
625-874
               

               
Cow position:
               
chr3:19802429-19802684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
52, 5
               

               
Conread position:
               
703-879
               

               
Cow position:
               
chr3:6189061-6189245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
706-875
               

               
Cow position:
               
chr3:52864616-52864447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
55, 47
               

               
Conread position:
               
706-876
               

               
Cow position:
               
chr3:23214204-23214035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
706-876
               

               
Cow position:
               
chr3:49137683-49137513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
707-873
               

               
Cow position:
               
chr3:39326576-39326741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
709-876
               

               
Cow position:
               
chr3:13518421-13518254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
709-876
               

               
Cow position:
               
chr3:77423541-77423708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
713-876
               

               
Cow position:
               
chr3:49677651-49677813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 34
               

               
Conread position:
               
733-876
               

               
Cow position:
               
chr3:40157621-40157479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
734-876
               

               
Cow position:
               
chr3:45895673-45895531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
734-876
               

               
Cow position:
               
chr3:45974382-45974524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
734-876
               

               
Cow position:
               
chr3:49545322-49545180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
27, 13
               

               
Conread position:
               
749-876
               

               
Cow position:
               
chr3:68700070-68699942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
886-1065
               

               
Cow position:
               
chr3:66990959-66991129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
167, 24
               

               
Conread position:
               
899-1048
               

               
Cow position:
               
chr3:14632494-14632350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
899-1061
               

               
Cow position:
               
chr3:48230800-48230644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 48
               

               
Conread position:
               
899-1065
               

               
Cow position:
               
chr3:19802854-19803020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
157, 47
               

               
Conread position:
               
899-1065
               

               
Cow position:
               
chr3:52864264-52864098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
154, 47
               

               
Conread position:
               
899-1065
               

               
Cow position:
               
chr3:64357964-64357802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
899-1066
               

               
Cow position:
               
chr3:6685655-6685819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
128, 45
               

               
Conread position:
               
902-1065
               

               
Cow position:
               
chr3:63004530-63004374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
154, 42
               

               
Conread position:
               
903-1051
               

               
Cow position:
               
chr3:29595403-29595547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               
Show alignments to all cow chromosomes.