Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039L19.5
        

               Conread position:
               1-876
               

               Cow position:
               
               

               Alignm length:
               913
               

               Alignm identity:
               619
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 101
               

               Conread position:
               7-873
               

               Cow position:
               
               

               Alignm length:
               907
               

               Alignm identity:
               644
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 25
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               932
               

               Alignm identity:
               605
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               935
               

               Alignm identity:
               616
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               923
               

               Alignm identity:
               599
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               7-876
               

               Cow position:
               
               

               Alignm length:
               939
               

               Alignm identity:
               610
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 92
               

               Conread position:
               9-372
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               37, 91
               

               Conread position:
               10-876
               

               Cow position:
               
               

               Alignm length:
               908
               

               Alignm identity:
               642
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 90
               

               Conread position:
               44-868
               

               Cow position:
               
               

               Alignm length:
               867
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               45-876
               

               Cow position:
               
               

               Alignm length:
               897
               

               Alignm identity:
               579
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               45-876
               

               Cow position:
               
               

               Alignm length:
               898
               

               Alignm identity:
               587
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 39
               

               Conread position:
               45-876
               

               Cow position:
               
               

               Alignm length:
               902
               

               Alignm identity:
               595
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 34
               

               Conread position:
               45-876
               

               Cow position:
               
               

               Alignm length:
               879
               

               Alignm identity:
               570
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 39
               

               Conread position:
               54-876
               

               Cow position:
               
               

               Alignm length:
               863
               

               Alignm identity:
               590
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               54-876
               

               Cow position:
               
               

               Alignm length:
               857
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 25
               

               Conread position:
               63-876
               

               Cow position:
               
               

               Alignm length:
               895
               

               Alignm identity:
               584
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 20
               

               Conread position:
               146-876
               

               Cow position:
               
               

               Alignm length:
               768
               

               Alignm identity:
               551
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 219
               

               Conread position:
               152-682
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               342
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               224, 65
               

               Conread position:
               152-862
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 129
               

               Conread position:
               156-869
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 12
               

               Conread position:
               157-578
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               158-581
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               301
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-607
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               313
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-782
               

               Cow position:
               
               

               Alignm length:
               668
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               158-849
               

               Cow position:
               
               

               Alignm length:
               731
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 136
               

               Conread position:
               158-862
               

               Cow position:
               
               

               Alignm length:
               745
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               158-869
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-869
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               749
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 125
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               762
               

               Alignm identity:
               525
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               767
               

               Alignm identity:
               530
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               756
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 135
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               753
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 59
               

               Conread position:
               158-876
               

               Cow position:
               
               

               Alignm length:
               755
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 60
               

               Conread position:
               160-518
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               123, 50
               

               Conread position:
               164-597
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               62, 114
               

               Conread position:
               164-859
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 626
               

               Conread position:
               164-868
               

               Cow position:
               
               

               Alignm length:
               738
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 111
               

               Conread position:
               164-876
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 53
               

               Conread position:
               164-876
               

               Cow position:
               
               

               Alignm length:
               754
               

               Alignm identity:
               473
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               53, 146
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               744
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 51
               

               Conread position:
               166-876
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 127
               

               Conread position:
               176-875
               

               Cow position:
               
               

               Alignm length:
               729
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 208
               

               Conread position:
               181-702
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               341
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               183, 36
               

               Conread position:
               211-856
               

               Cow position:
               
               

               Alignm length:
               677
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 105
               

               Conread position:
               254-876
               

               Cow position:
               
               

               Alignm length:
               657
               

               Alignm identity:
               422
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               79, 157
               

               Conread position:
               275-876
               

               Cow position:
               
               

               Alignm length:
               635
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 13
               

               Conread position:
               295-876
               

               Cow position:
               
               

               Alignm length:
               632
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 553
               

               Conread position:
               295-876
               

               Cow position:
               
               

               Alignm length:
               628
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 205
               

               Conread position:
               302-685
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               47, 228
               

               Conread position:
               302-876
               

               Cow position:
               
               

               Alignm length:
               607
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 140
               

               Conread position:
               321-876
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 53
               

               Conread position:
               346-722
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               280
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               109, 8
               

               Conread position:
               356-876
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 428
               

               Conread position:
               367-876
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               338
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               54, 58
               

               Conread position:
               368-876
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               348
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               91, 41
               

               Conread position:
               377-876
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               311
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               78, 50
               

               Conread position:
               377-876
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 401
               

               Conread position:
               377-876
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 19
               

               Conread position:
               380-860
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               316
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               75, 106
               

               Conread position:
               486-876
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               286
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               27, 7
               

               Conread position:
               491-745
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               501-876
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 275
               

               Conread position:
               543-869
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               554-868
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               40, 166
               

               Conread position:
               604-873
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 45
               

               Conread position:
               604-876
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               70, 104
               

               Conread position:
               622-876
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               86, 35
               

               Conread position:
               622-876
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               52, 133
               

               Conread position:
               632-876
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               44, 17
               

               Conread position:
               640-876
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               36, 116
               

               Conread position:
               709-876
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               52, 38
               

               Conread position:
               716-876
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               45, 30
               

               Conread position:
               725-876
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               36, 22
               

               Conread position:
               735-876
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               26, 10
               

               Conread position:
               882-1065
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               171, 30
               

               Conread position:
               899-1061
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               100, 47
               

               Conread position:
               899-1065
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               132
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               153, 45
               

               Conread position:
               903-1061
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               145, 43
               
Show alignments to all cow chromosomes.