Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039L19.5 |
| Conread position: | 1-874 |
| Cow position: | chr5:41530547-41529667 (view UCSC Genome Browser custom track) |
| Alignm length: | 908 |
| Alignm identity: | 635 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 100 |
| Conread position: | 7-843 |
| Cow position: | chr5:10844879-10843981 (view UCSC Genome Browser custom track) |
| Alignm length: | 905 |
| Alignm identity: | 598 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 7-876 |
| Cow position: | chr5:4020199-4019272 (view UCSC Genome Browser custom track) |
| Alignm length: | 940 |
| Alignm identity: | 607 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 7-876 |
| Cow position: | chr5:10777250-10776338 (view UCSC Genome Browser custom track) |
| Alignm length: | 926 |
| Alignm identity: | 604 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 7-876 |
| Cow position: | chr5:27910275-27909346 (view UCSC Genome Browser custom track) |
| Alignm length: | 938 |
| Alignm identity: | 617 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 7-876 |
| Cow position: | chr5:31705572-31706500 (view UCSC Genome Browser custom track) |
| Alignm length: | 935 |
| Alignm identity: | 605 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 78 |
| Conread position: | 7-876 |
| Cow position: | chr5:32771471-32772408 (view UCSC Genome Browser custom track) |
| Alignm length: | 942 |
| Alignm identity: | 610 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 78 |
| Conread position: | 7-876 |
| Cow position: | chr5:46663000-46663929 (view UCSC Genome Browser custom track) |
| Alignm length: | 935 |
| Alignm identity: | 603 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 77 |
| Conread position: | 7-901 |
| Cow position: | chr5:32674715-32673793 (view UCSC Genome Browser custom track) |
| Alignm length: | 936 |
| Alignm identity: | 670 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 97 |
| Conread position: | 10-400 |
| Cow position: | chr5:3963469-3963856 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 247 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 87 |
| Conread position: | 10-522 |
| Cow position: | chr5:46006402-46005886 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 344 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 34, 100 |
| Conread position: | 10-595 |
| Cow position: | chr5:41963898-41963304 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 84 |
| Conread position: | 10-877 |
| Cow position: | chr5:49594440-49593528 (view UCSC Genome Browser custom track) |
| Alignm length: | 923 |
| Alignm identity: | 656 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 12-476 |
| Cow position: | chr5:29456658-29457121 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 88 |
| Conread position: | 13-862 |
| Cow position: | chr5:61274137-61273270 (view UCSC Genome Browser custom track) |
| Alignm length: | 878 |
| Alignm identity: | 646 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 93 |
| Conread position: | 15-876 |
| Cow position: | chr5:28006266-28007126 (view UCSC Genome Browser custom track) |
| Alignm length: | 894 |
| Alignm identity: | 604 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 29-876 |
| Cow position: | chr5:41551845-41551001 (view UCSC Genome Browser custom track) |
| Alignm length: | 883 |
| Alignm identity: | 601 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 43 |
| Conread position: | 32-355 |
| Cow position: | chr5:45699090-45699406 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 32-704 |
| Cow position: | chr5:12682451-12681764 (view UCSC Genome Browser custom track) |
| Alignm length: | 698 |
| Alignm identity: | 485 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 33-704 |
| Cow position: | chr5:23716897-23716200 (view UCSC Genome Browser custom track) |
| Alignm length: | 704 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 67 |
| Conread position: | 33-810 |
| Cow position: | chr5:27569263-27570015 (view UCSC Genome Browser custom track) |
| Alignm length: | 812 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 32 |
| Conread position: | 35-403 |
| Cow position: | chr5:49123768-49123405 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 35-876 |
| Cow position: | chr5:58195030-58195928 (view UCSC Genome Browser custom track) |
| Alignm length: | 907 |
| Alignm identity: | 591 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 10 |
| Conread position: | 36-875 |
| Cow position: | chr5:32944943-32945799 (view UCSC Genome Browser custom track) |
| Alignm length: | 881 |
| Alignm identity: | 612 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 44-830 |
| Cow position: | chr5:54793549-54792732 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 38 |
| Conread position: | 44-876 |
| Cow position: | chr5:49120210-49119355 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 36 |
| Conread position: | 45-854 |
| Cow position: | chr5:47832060-47831203 (view UCSC Genome Browser custom track) |
| Alignm length: | 871 |
| Alignm identity: | 573 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 45-876 |
| Cow position: | chr5:46775126-46776006 (view UCSC Genome Browser custom track) |
| Alignm length: | 892 |
| Alignm identity: | 581 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 31 |
| Conread position: | 49-783 |
| Cow position: | chr5:4384296-4385060 (view UCSC Genome Browser custom track) |
| Alignm length: | 777 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 78-876 |
| Cow position: | chr5:32734115-32733326 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 126-876 |
| Cow position: | chr5:14379274-14380089 (view UCSC Genome Browser custom track) |
| Alignm length: | 822 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 398 |
| Conread position: | 145-702 |
| Cow position: | chr5:52804521-52805078 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 393 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 131 |
| Conread position: | 145-861 |
| Cow position: | chr5:27683565-27682859 (view UCSC Genome Browser custom track) |
| Alignm length: | 739 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 57 |
| Conread position: | 145-876 |
| Cow position: | chr5:2530403-2531197 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 540 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 298 |
| Conread position: | 145-876 |
| Cow position: | chr5:4088002-4088731 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 456 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 76 |
| Conread position: | 149-857 |
| Cow position: | chr5:34202132-34202847 (view UCSC Genome Browser custom track) |
| Alignm length: | 747 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 71 |
| Conread position: | 149-870 |
| Cow position: | chr5:14659933-14659174 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 480 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 11, 71 |
| Conread position: | 152-453 |
| Cow position: | chr5:7503214-7502913 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 152-876 |
| Cow position: | chr5:46658868-46659641 (view UCSC Genome Browser custom track) |
| Alignm length: | 793 |
| Alignm identity: | 519 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 11, 37 |
| Conread position: | 153-869 |
| Cow position: | chr5:56858530-56857785 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 464 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 54, 176 |
| Conread position: | 154-612 |
| Cow position: | chr5:27652780-27652350 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 218 |
| Conread position: | 158-672 |
| Cow position: | chr5:59281938-59282477 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 158-876 |
| Cow position: | chr5:1342618-1341867 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 111 |
| Conread position: | 158-876 |
| Cow position: | chr5:2913628-2914377 (view UCSC Genome Browser custom track) |
| Alignm length: | 759 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 158-876 |
| Cow position: | chr5:3505063-3504324 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 105 |
| Conread position: | 158-876 |
| Cow position: | chr5:3784992-3785716 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 51 |
| Conread position: | 158-876 |
| Cow position: | chr5:6159015-6158271 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 510 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 59 |
| Conread position: | 158-876 |
| Cow position: | chr5:7273048-7273778 (view UCSC Genome Browser custom track) |
| Alignm length: | 742 |
| Alignm identity: | 500 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 59 |
| Conread position: | 158-876 |
| Cow position: | chr5:30578503-30579248 (view UCSC Genome Browser custom track) |
| Alignm length: | 754 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 118 |
| Conread position: | 158-876 |
| Cow position: | chr5:46739424-46738659 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 158-876 |
| Cow position: | chr5:48809532-48808789 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 135 |
| Conread position: | 158-876 |
| Cow position: | chr5:55627183-55627913 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 511 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 158-876 |
| Cow position: | chr5:64782836-64782092 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 160-506 |
| Cow position: | chr5:27060892-27060547 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 213, 41 |
| Conread position: | 160-876 |
| Cow position: | chr5:46631220-46630515 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 361, 36 |
| Conread position: | 161-750 |
| Cow position: | chr5:23756380-23755799 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 378 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 244, 56 |
| Conread position: | 162-575 |
| Cow position: | chr5:23688298-23687864 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 289 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 55, 139 |
| Conread position: | 162-607 |
| Cow position: | chr5:25001730-25001282 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 299 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 8, 39 |
| Conread position: | 163-876 |
| Cow position: | chr5:2430949-2430206 (view UCSC Genome Browser custom track) |
| Alignm length: | 753 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 54 |
| Conread position: | 163-876 |
| Cow position: | chr5:4068176-4068916 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 215, 54 |
| Conread position: | 164-385 |
| Cow position: | chr5:13607576-13607355 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 154 |
| Conread position: | 164-515 |
| Cow position: | chr5:26070653-26070319 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 232 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 61, 50 |
| Conread position: | 164-675 |
| Cow position: | chr5:27000387-27000898 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 342 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 55, 135 |
| Conread position: | 164-776 |
| Cow position: | chr5:27488212-27488844 (view UCSC Genome Browser custom track) |
| Alignm length: | 643 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 30 |
| Conread position: | 164-876 |
| Cow position: | chr5:24329500-24330200 (view UCSC Genome Browser custom track) |
| Alignm length: | 745 |
| Alignm identity: | 505 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 35 |
| Conread position: | 165-840 |
| Cow position: | chr5:23227450-23228146 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 459 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 19 |
| Conread position: | 166-838 |
| Cow position: | chr5:49100831-49101506 (view UCSC Genome Browser custom track) |
| Alignm length: | 697 |
| Alignm identity: | 422 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 195, 96 |
| Conread position: | 166-851 |
| Cow position: | chr5:34695771-34696484 (view UCSC Genome Browser custom track) |
| Alignm length: | 725 |
| Alignm identity: | 495 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 51 |
| Conread position: | 166-869 |
| Cow position: | chr5:416535-415803 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 127 |
| Conread position: | 166-869 |
| Cow position: | chr5:24097840-24098568 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 87 |
| Conread position: | 166-876 |
| Cow position: | chr5:10917989-10918724 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 515 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 51 |
| Conread position: | 166-876 |
| Cow position: | chr5:37731530-37732272 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 51 |
| Conread position: | 166-876 |
| Cow position: | chr5:49181492-49182195 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 51 |
| Conread position: | 167-876 |
| Cow position: | chr5:26769008-26769736 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 195 |
| Conread position: | 167-876 |
| Cow position: | chr5:28030701-28031403 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 507 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 138 |
| Conread position: | 167-876 |
| Cow position: | chr5:29008572-29009281 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 504 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 151 |
| Conread position: | 175-594 |
| Cow position: | chr5:76124352-76123926 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 274 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 45, 74 |
| Conread position: | 176-876 |
| Cow position: | chr5:57483346-57482620 (view UCSC Genome Browser custom track) |
| Alignm length: | 740 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 220-744 |
| Cow position: | chr5:30088466-30087927 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 344 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 80, 71 |
| Conread position: | 230-876 |
| Cow position: | chr5:57366746-57366096 (view UCSC Genome Browser custom track) |
| Alignm length: | 670 |
| Alignm identity: | 412 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 78, 62 |
| Conread position: | 232-876 |
| Cow position: | chr5:61020586-61019918 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 418 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 25, 56 |
| Conread position: | 248-388 |
| Cow position: | chr5:12901801-12901664 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 125, 60 |
| Conread position: | 254-647 |
| Cow position: | chr5:6519170-6519576 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 80 |
| Conread position: | 256-876 |
| Cow position: | chr5:3963741-3964390 (view UCSC Genome Browser custom track) |
| Alignm length: | 661 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 239 |
| Conread position: | 269-876 |
| Cow position: | chr5:39165515-39164874 (view UCSC Genome Browser custom track) |
| Alignm length: | 646 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 512 |
| Conread position: | 295-876 |
| Cow position: | chr5:24576216-24576841 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 495 |
| Conread position: | 295-876 |
| Cow position: | chr5:26079916-26079292 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 181 |
| Conread position: | 295-876 |
| Cow position: | chr5:48468970-48468353 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 252 |
| Conread position: | 295-876 |
| Cow position: | chr5:59481553-59482180 (view UCSC Genome Browser custom track) |
| Alignm length: | 631 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 209 |
| Conread position: | 302-862 |
| Cow position: | chr5:59059929-59060533 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 339 |
| Conread position: | 302-872 |
| Cow position: | chr5:53714567-53715176 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 334 |
| Conread position: | 302-876 |
| Cow position: | chr5:45182781-45182177 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 189 |
| Conread position: | 302-876 |
| Cow position: | chr5:46644025-46644613 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 363 |
| Conread position: | 316-874 |
| Cow position: | chr5:26090492-26089907 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 26 |
| Conread position: | 348-865 |
| Cow position: | chr5:58061462-58060925 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 335 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 18, 195 |
| Conread position: | 367-874 |
| Cow position: | chr5:9687021-9686504 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 146 |
| Conread position: | 372-876 |
| Cow position: | chr5:55097302-55096785 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 324 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 41, 58 |
| Conread position: | 374-876 |
| Cow position: | chr5:18665354-18665888 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 405 |
| Conread position: | 388-787 |
| Cow position: | chr5:45699688-45700121 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 421-876 |
| Cow position: | chr5:31102153-31101671 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 360 |
| Conread position: | 447-876 |
| Cow position: | chr5:54932750-54932292 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 327 |
| Conread position: | 486-876 |
| Cow position: | chr5:29042025-29042438 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 7 |
| Conread position: | 491-862 |
| Cow position: | chr5:46005867-46005464 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 16, 281 |
| Conread position: | 491-876 |
| Cow position: | chr5:44458995-44459409 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 285 |
| Conread position: | 540-876 |
| Cow position: | chr5:25207168-25206814 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 47 |
| Conread position: | 542-869 |
| Cow position: | chr5:49518239-49518579 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 56, 45 |
| Conread position: | 591-876 |
| Cow position: | chr5:6589386-6589095 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 8 |
| Conread position: | 604-874 |
| Cow position: | chr5:20972358-20972108 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 157, 31 |
| Conread position: | 604-876 |
| Cow position: | chr5:25001001-25000718 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 102, 26 |
| Conread position: | 604-876 |
| Cow position: | chr5:41962588-41962312 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 43 |
| Conread position: | 606-876 |
| Cow position: | chr5:27652332-27652056 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 10, 47 |
| Conread position: | 613-847 |
| Cow position: | chr5:26069058-26068820 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 65, 138 |
| Conread position: | 635-876 |
| Cow position: | chr5:58819957-58819708 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 41, 120 |
| Conread position: | 651-876 |
| Cow position: | chr5:5318063-5317831 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 26, 104 |
| Conread position: | 655-876 |
| Cow position: | chr5:52433674-52433894 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 676-874 |
| Cow position: | chr5:52805097-52805290 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 85, 29 |
| Conread position: | 720-876 |
| Cow position: | chr5:5786829-5786681 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 730-869 |
| Cow position: | chr5:27060464-27060324 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 741-876 |
| Cow position: | chr5:39247591-39247457 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 6 |
| Conread position: | 747-910 |
| Cow position: | chr5:29436172-29436007 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 886-1065 |
| Cow position: | chr5:49593360-49593185 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 170, 30 |
| Conread position: | 896-1061 |
| Cow position: | chr5:40053551-40053705 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 160, 50 |
| Conread position: | 899-1062 |
| Cow position: | chr5:46659820-46659982 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 154, 47 |
| Conread position: | 954-1073 |
| Cow position: | chr5:41962121-41961999 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 18, 0 |
Show alignments to all cow chromosomes.