Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039L19.5 |
| Conread position: | 1-876 |
| Cow position: | chr6:6477286-6476415 (view UCSC Genome Browser custom track) |
| Alignm length: | 907 |
| Alignm identity: | 619 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 53 |
| Conread position: | 3-876 |
| Cow position: | chr6:66230986-66231860 (view UCSC Genome Browser custom track) |
| Alignm length: | 903 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 102 |
| Conread position: | 7-380 |
| Cow position: | chr6:47958251-47958617 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 94 |
| Conread position: | 7-724 |
| Cow position: | chr6:39907293-39908066 (view UCSC Genome Browser custom track) |
| Alignm length: | 783 |
| Alignm identity: | 498 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 17, 40 |
| Conread position: | 7-774 |
| Cow position: | chr6:65908571-65909390 (view UCSC Genome Browser custom track) |
| Alignm length: | 831 |
| Alignm identity: | 541 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 7-858 |
| Cow position: | chr6:26671729-26670814 (view UCSC Genome Browser custom track) |
| Alignm length: | 925 |
| Alignm identity: | 602 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 7-869 |
| Cow position: | chr6:7142323-7141410 (view UCSC Genome Browser custom track) |
| Alignm length: | 926 |
| Alignm identity: | 611 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 7-874 |
| Cow position: | chr6:332342-331402 (view UCSC Genome Browser custom track) |
| Alignm length: | 951 |
| Alignm identity: | 621 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 7-876 |
| Cow position: | chr6:2373848-2374768 (view UCSC Genome Browser custom track) |
| Alignm length: | 935 |
| Alignm identity: | 618 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 78 |
| Conread position: | 7-876 |
| Cow position: | chr6:17599140-17598211 (view UCSC Genome Browser custom track) |
| Alignm length: | 939 |
| Alignm identity: | 611 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 7-876 |
| Cow position: | chr6:44151399-44150488 (view UCSC Genome Browser custom track) |
| Alignm length: | 928 |
| Alignm identity: | 596 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 40 |
| Conread position: | 7-876 |
| Cow position: | chr6:65822960-65822058 (view UCSC Genome Browser custom track) |
| Alignm length: | 918 |
| Alignm identity: | 598 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 10-876 |
| Cow position: | chr6:28062491-28063406 (view UCSC Genome Browser custom track) |
| Alignm length: | 931 |
| Alignm identity: | 614 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 75 |
| Conread position: | 10-876 |
| Cow position: | chr6:38231440-38232345 (view UCSC Genome Browser custom track) |
| Alignm length: | 920 |
| Alignm identity: | 661 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 81 |
| Conread position: | 10-876 |
| Cow position: | chr6:57870865-57869935 (view UCSC Genome Browser custom track) |
| Alignm length: | 940 |
| Alignm identity: | 627 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 37 |
| Conread position: | 12-874 |
| Cow position: | chr6:12093678-12092826 (view UCSC Genome Browser custom track) |
| Alignm length: | 893 |
| Alignm identity: | 604 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 68 |
| Conread position: | 26-750 |
| Cow position: | chr6:40314071-40314844 (view UCSC Genome Browser custom track) |
| Alignm length: | 791 |
| Alignm identity: | 506 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 38, 65 |
| Conread position: | 32-514 |
| Cow position: | chr6:13275790-13276238 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 40-860 |
| Cow position: | chr6:27530791-27529951 (view UCSC Genome Browser custom track) |
| Alignm length: | 859 |
| Alignm identity: | 585 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 44-876 |
| Cow position: | chr6:5952028-5951178 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 578 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 37 |
| Conread position: | 45-876 |
| Cow position: | chr6:2553886-2554774 (view UCSC Genome Browser custom track) |
| Alignm length: | 895 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 39 |
| Conread position: | 54-876 |
| Cow position: | chr6:3278730-3277882 (view UCSC Genome Browser custom track) |
| Alignm length: | 863 |
| Alignm identity: | 580 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 27 |
| Conread position: | 56-876 |
| Cow position: | chr6:43616901-43617784 (view UCSC Genome Browser custom track) |
| Alignm length: | 893 |
| Alignm identity: | 593 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 56-876 |
| Cow position: | chr6:68025969-68026860 (view UCSC Genome Browser custom track) |
| Alignm length: | 900 |
| Alignm identity: | 586 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 28 |
| Conread position: | 97-546 |
| Cow position: | chr6:2111697-2111241 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 300 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 48, 198 |
| Conread position: | 141-743 |
| Cow position: | chr6:21686205-21686823 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 23 |
| Conread position: | 144-876 |
| Cow position: | chr6:15141867-15141112 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 75 |
| Conread position: | 145-875 |
| Cow position: | chr6:11278391-11277629 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 145-876 |
| Cow position: | chr6:27168845-27169645 (view UCSC Genome Browser custom track) |
| Alignm length: | 804 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 145-876 |
| Cow position: | chr6:42926709-42927451 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 60 |
| Conread position: | 151-876 |
| Cow position: | chr6:27468583-27469319 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 522 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 25 |
| Conread position: | 151-876 |
| Cow position: | chr6:35877404-35876650 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 66 |
| Conread position: | 155-876 |
| Cow position: | chr6:15281228-15280484 (view UCSC Genome Browser custom track) |
| Alignm length: | 756 |
| Alignm identity: | 501 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 139 |
| Conread position: | 156-876 |
| Cow position: | chr6:65840904-65841652 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 139 |
| Conread position: | 158-519 |
| Cow position: | chr6:40555292-40554931 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 158-598 |
| Cow position: | chr6:24238370-24238820 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 158-607 |
| Cow position: | chr6:52193-51736 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 158-612 |
| Cow position: | chr6:2401586-2402036 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 298 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 177 |
| Conread position: | 158-751 |
| Cow position: | chr6:47044115-47043488 (view UCSC Genome Browser custom track) |
| Alignm length: | 641 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 139 |
| Conread position: | 158-759 |
| Cow position: | chr6:39436957-39437591 (view UCSC Genome Browser custom track) |
| Alignm length: | 644 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 158-862 |
| Cow position: | chr6:8201051-8201785 (view UCSC Genome Browser custom track) |
| Alignm length: | 743 |
| Alignm identity: | 506 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 158-868 |
| Cow position: | chr6:30275851-30275118 (view UCSC Genome Browser custom track) |
| Alignm length: | 750 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 135 |
| Conread position: | 158-869 |
| Cow position: | chr6:3890167-3889418 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 158-876 |
| Cow position: | chr6:912950-913710 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 51 |
| Conread position: | 158-876 |
| Cow position: | chr6:3489073-3488332 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 503 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 158-876 |
| Cow position: | chr6:21970996-21971754 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 46 |
| Conread position: | 158-876 |
| Cow position: | chr6:36525364-36526111 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 135 |
| Conread position: | 158-876 |
| Cow position: | chr6:55545009-55544259 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 517 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 60 |
| Conread position: | 158-876 |
| Cow position: | chr6:65880178-65880935 (view UCSC Genome Browser custom track) |
| Alignm length: | 764 |
| Alignm identity: | 530 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 45 |
| Conread position: | 158-900 |
| Cow position: | chr6:34893688-34892917 (view UCSC Genome Browser custom track) |
| Alignm length: | 780 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 160-765 |
| Cow position: | chr6:10053962-10054570 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 15 |
| Conread position: | 164-813 |
| Cow position: | chr6:65900590-65899916 (view UCSC Genome Browser custom track) |
| Alignm length: | 686 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 21 |
| Conread position: | 164-876 |
| Cow position: | chr6:7180334-7179628 (view UCSC Genome Browser custom track) |
| Alignm length: | 731 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 180 |
| Conread position: | 164-876 |
| Cow position: | chr6:30478410-30479167 (view UCSC Genome Browser custom track) |
| Alignm length: | 760 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 316 |
| Conread position: | 165-441 |
| Cow position: | chr6:4904724-4904449 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 202, 52 |
| Conread position: | 166-425 |
| Cow position: | chr6:62829570-62829313 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 141, 125 |
| Conread position: | 166-794 |
| Cow position: | chr6:1823912-1823265 (view UCSC Genome Browser custom track) |
| Alignm length: | 662 |
| Alignm identity: | 450 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 103 |
| Conread position: | 166-870 |
| Cow position: | chr6:20561773-20561049 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 127 |
| Conread position: | 166-876 |
| Cow position: | chr6:10559287-10558592 (view UCSC Genome Browser custom track) |
| Alignm length: | 730 |
| Alignm identity: | 508 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 51 |
| Conread position: | 167-874 |
| Cow position: | chr6:19453270-19453983 (view UCSC Genome Browser custom track) |
| Alignm length: | 735 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 49 |
| Conread position: | 175-508 |
| Cow position: | chr6:37477569-37477914 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 243 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 45, 160 |
| Conread position: | 175-508 |
| Cow position: | chr6:66538668-66539000 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 176-704 |
| Cow position: | chr6:64712891-64713432 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 353 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 176-704 |
| Cow position: | chr6:64714458-64715006 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 354 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 176-861 |
| Cow position: | chr6:50498112-50497405 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 496 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 41 |
| Conread position: | 176-876 |
| Cow position: | chr6:13103364-13104126 (view UCSC Genome Browser custom track) |
| Alignm length: | 766 |
| Alignm identity: | 514 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 73 |
| Conread position: | 177-766 |
| Cow position: | chr6:65007206-65007795 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 123 |
| Conread position: | 196-529 |
| Cow position: | chr6:13318328-13317994 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 239 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 23, 104 |
| Conread position: | 197-876 |
| Cow position: | chr6:28274350-28275050 (view UCSC Genome Browser custom track) |
| Alignm length: | 712 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 96 |
| Conread position: | 210-874 |
| Cow position: | chr6:33388214-33388896 (view UCSC Genome Browser custom track) |
| Alignm length: | 715 |
| Alignm identity: | 487 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 109 |
| Conread position: | 220-868 |
| Cow position: | chr6:16671769-16672442 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 421 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 116 |
| Conread position: | 231-575 |
| Cow position: | chr6:52735789-52736149 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 88, 133 |
| Conread position: | 253-503 |
| Cow position: | chr6:734585-734835 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 121, 11 |
| Conread position: | 253-876 |
| Cow position: | chr6:701365-702023 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 56 |
| Conread position: | 281-876 |
| Cow position: | chr6:44028488-44029111 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 295-607 |
| Cow position: | chr6:6935681-6935343 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 295-607 |
| Cow position: | chr6:41757540-41757204 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 9, 178 |
| Conread position: | 295-727 |
| Cow position: | chr6:45671713-45672184 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 319 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 9, 199 |
| Conread position: | 298-704 |
| Cow position: | chr6:40274705-40275149 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 291 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 298-876 |
| Cow position: | chr6:34126798-34127421 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 302-755 |
| Cow position: | chr6:13977995-13978466 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 311 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 140, 70 |
| Conread position: | 302-876 |
| Cow position: | chr6:1405774-1405170 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 200 |
| Conread position: | 302-876 |
| Cow position: | chr6:28492058-28491446 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 35 |
| Conread position: | 307-871 |
| Cow position: | chr6:11353210-11353804 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 382 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 26, 18 |
| Conread position: | 309-876 |
| Cow position: | chr6:13943380-13943976 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 299 |
| Conread position: | 317-875 |
| Cow position: | chr6:59919786-59919211 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 58 |
| Conread position: | 321-876 |
| Cow position: | chr6:68362822-68362254 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 53 |
| Conread position: | 341-873 |
| Cow position: | chr6:59741527-59740989 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 368 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 28, 149 |
| Conread position: | 346-862 |
| Cow position: | chr6:17045569-17046113 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 12 |
| Conread position: | 346-876 |
| Cow position: | chr6:29311000-29311559 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 12 |
| Conread position: | 347-772 |
| Cow position: | chr6:42360157-42359716 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 73, 25 |
| Conread position: | 347-848 |
| Cow position: | chr6:48367939-48368429 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 333 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 182, 25 |
| Conread position: | 352-876 |
| Cow position: | chr6:42723409-42722859 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 366-856 |
| Cow position: | chr6:2885772-2886256 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 335 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 86, 122 |
| Conread position: | 366-876 |
| Cow position: | chr6:6566139-6566673 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 370 |
| Conread position: | 367-869 |
| Cow position: | chr6:39161741-39162248 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 325 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 88, 9 |
| Conread position: | 372-585 |
| Cow position: | chr6:28106232-28106009 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 77, 208 |
| Conread position: | 384-876 |
| Cow position: | chr6:65927490-65928004 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 111 |
| Conread position: | 385-849 |
| Cow position: | chr6:35421014-35420554 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 310 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 36, 42 |
| Conread position: | 387-876 |
| Cow position: | chr6:58409360-58408844 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 387 |
| Conread position: | 409-876 |
| Cow position: | chr6:8761731-8761236 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 370 |
| Conread position: | 487-869 |
| Cow position: | chr6:40554928-40554533 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 274 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 41, 98 |
| Conread position: | 488-867 |
| Cow position: | chr6:10640786-10641185 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 164 |
| Conread position: | 490-876 |
| Cow position: | chr6:37115796-37116207 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 378 |
| Conread position: | 540-872 |
| Cow position: | chr6:28474423-28474766 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 74 |
| Conread position: | 540-876 |
| Cow position: | chr6:13317771-13317421 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 255 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 47 |
| Conread position: | 554-853 |
| Cow position: | chr6:8019821-8020120 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 150, 49 |
| Conread position: | 556-876 |
| Cow position: | chr6:62396897-62397224 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 216 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 37, 63 |
| Conread position: | 577-872 |
| Cow position: | chr6:37642162-37642465 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 16, 28 |
| Conread position: | 580-876 |
| Cow position: | chr6:12528598-12528902 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 13, 43 |
| Conread position: | 585-875 |
| Cow position: | chr6:34203285-34203574 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 125, 67 |
| Conread position: | 591-874 |
| Cow position: | chr6:13846825-13847101 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 595-875 |
| Cow position: | chr6:33459644-33459930 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 160 |
| Conread position: | 596-862 |
| Cow position: | chr6:32330997-32330737 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 107, 50 |
| Conread position: | 603-876 |
| Cow position: | chr6:1100797-1100519 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 74, 189 |
| Conread position: | 604-874 |
| Cow position: | chr6:13276591-13276866 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 206 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 73, 151 |
| Conread position: | 604-876 |
| Cow position: | chr6:16051675-16051948 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 103 |
| Conread position: | 617-876 |
| Cow position: | chr6:1412134-1411872 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 91, 5 |
| Conread position: | 622-876 |
| Cow position: | chr6:526050-526306 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 167 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 82 |
| Conread position: | 622-876 |
| Cow position: | chr6:24238871-24239133 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 133 |
| Conread position: | 622-876 |
| Cow position: | chr6:43793950-43793702 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 48, 10 |
| Conread position: | 625-876 |
| Cow position: | chr6:25214078-25214326 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 80, 40 |
| Conread position: | 640-868 |
| Cow position: | chr6:52692861-52693115 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 34, 199 |
| Conread position: | 706-876 |
| Cow position: | chr6:7866853-7866683 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 711-869 |
| Cow position: | chr6:3148908-3149065 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 79, 43 |
| Conread position: | 711-870 |
| Cow position: | chr6:64715134-64715292 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 94, 15 |
| Conread position: | 720-876 |
| Cow position: | chr6:39908441-39908595 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 41, 33 |
| Conread position: | 730-876 |
| Cow position: | chr6:49520459-49520312 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 31, 61 |
| Conread position: | 731-869 |
| Cow position: | chr6:47043283-47043143 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 83 |
| Conread position: | 735-874 |
| Cow position: | chr6:52804453-52804591 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 886-1065 |
| Cow position: | chr6:38232514-38232688 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 167, 22 |
| Conread position: | 886-1065 |
| Cow position: | chr6:43608124-43607954 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 170, 22 |
| Conread position: | 899-1059 |
| Cow position: | chr6:37116381-37116540 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 154, 46 |
| Conread position: | 899-1061 |
| Cow position: | chr6:6476244-6476091 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 154, 40 |
Show alignments to all cow chromosomes.