Cow genome map

Conread name: Ss1.1-Pig4-TMW8039L19.5

Conread position: 1-296
Cow position:
Alignm length: 304
Alignm identity: 216
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 7, 34

Conread position: 1-510
Cow position:
Alignm length: 520
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 31

Conread position: 1-536
Cow position:
Alignm length: 559
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 29

Conread position: 1-585
Cow position:
Alignm length: 602
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 63

Conread position: 7-876
Cow position:
Alignm length: 910
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 85

Conread position: 7-876
Cow position:
Alignm length: 940
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 78

Conread position: 7-876
Cow position:
Alignm length: 901
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 94

Conread position: 9-565
Cow position:
Alignm length: 593
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 228

Conread position: 10-328
Cow position:
Alignm length: 327
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 34, 90

Conread position: 10-342
Cow position:
Alignm length: 340
Alignm identity: 235
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 34, 91

Conread position: 10-876
Cow position:
Alignm length: 900
Alignm identity: 622
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 60

Conread position: 11-876
Cow position:
Alignm length: 920
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 74

Conread position: 13-441
Cow position:
Alignm length: 440
Alignm identity: 284
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 91

Conread position: 15-502
Cow position:
Alignm length: 501
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 91

Conread position: 29-862
Cow position:
Alignm length: 861
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 55

Conread position: 32-401
Cow position:
Alignm length: 385
Alignm identity: 223
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 9, 68

Conread position: 40-675
Cow position:
Alignm length: 665
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 41

Conread position: 40-876
Cow position:
Alignm length: 869
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 41

Conread position: 44-876
Cow position:
Alignm length: 872
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 44-876
Cow position:
Alignm length: 868
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 37

Conread position: 54-876
Cow position:
Alignm length: 858
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 27

Conread position: 55-322
Cow position:
Alignm length: 271
Alignm identity: 176
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 9, 43

Conread position: 56-876
Cow position:
Alignm length: 885
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 28

Conread position: 57-876
Cow position:
Alignm length: 877
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 27

Conread position: 66-351
Cow position:
Alignm length: 288
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 33

Conread position: 68-593
Cow position:
Alignm length: 571
Alignm identity: 363
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 150, 15

Conread position: 69-876
Cow position:
Alignm length: 873
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 14

Conread position: 71-857
Cow position:
Alignm length: 823
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 27

Conread position: 75-874
Cow position:
Alignm length: 840
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 15

Conread position: 75-876
Cow position:
Alignm length: 835
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 28

Conread position: 140-389
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 23, 227

Conread position: 144-876
Cow position:
Alignm length: 773
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 78

Conread position: 145-416
Cow position:
Alignm length: 275
Alignm identity: 187
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 31, 73

Conread position: 145-596
Cow position:
Alignm length: 473
Alignm identity: 295
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 26

Conread position: 145-876
Cow position:
Alignm length: 803
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 368

Conread position: 145-876
Cow position:
Alignm length: 801
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 670

Conread position: 147-415
Cow position:
Alignm length: 274
Alignm identity: 180
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 76, 25

Conread position: 149-876
Cow position:
Alignm length: 749
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 153

Conread position: 153-840
Cow position:
Alignm length: 702
Alignm identity: 437
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 9, 32

Conread position: 155-634
Cow position:
Alignm length: 500
Alignm identity: 310
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 62, 281

Conread position: 156-876
Cow position:
Alignm length: 750
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 28

Conread position: 158-453
Cow position:
Alignm length: 300
Alignm identity: 198
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 60, 171

Conread position: 158-474
Cow position:
Alignm length: 324
Alignm identity: 211
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 59

Conread position: 158-595
Cow position:
Alignm length: 456
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-869
Cow position:
Alignm length: 751
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-876
Cow position:
Alignm length: 755
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 133

Conread position: 158-876
Cow position:
Alignm length: 754
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 135

Conread position: 158-876
Cow position:
Alignm length: 756
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 135

Conread position: 158-876
Cow position:
Alignm length: 750
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 18

Conread position: 158-876
Cow position:
Alignm length: 748
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 158-876
Cow position:
Alignm length: 775
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 18

Conread position: 158-876
Cow position:
Alignm length: 760
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 110

Conread position: 158-876
Cow position:
Alignm length: 756
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 159-836
Cow position:
Alignm length: 699
Alignm identity: 434
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 56, 136

Conread position: 159-876
Cow position:
Alignm length: 754
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 134

Conread position: 160-542
Cow position:
Alignm length: 390
Alignm identity: 262
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 257, 49

Conread position: 160-876
Cow position:
Alignm length: 750
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 22

Conread position: 164-581
Cow position:
Alignm length: 427
Alignm identity: 272
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 58, 175

Conread position: 164-871
Cow position:
Alignm length: 744
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 76

Conread position: 164-876
Cow position:
Alignm length: 760
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 348

Conread position: 164-876
Cow position:
Alignm length: 733
Alignm identity: 448
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 57, 184

Conread position: 166-876
Cow position:
Alignm length: 747
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 51

Conread position: 167-876
Cow position:
Alignm length: 746
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 212

Conread position: 175-766
Cow position:
Alignm length: 616
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 39

Conread position: 176-876
Cow position:
Alignm length: 750
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 41

Conread position: 184-874
Cow position:
Alignm length: 712
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 33

Conread position: 185-876
Cow position:
Alignm length: 712
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 32

Conread position: 196-876
Cow position:
Alignm length: 712
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 97

Conread position: 203-876
Cow position:
Alignm length: 709
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 88

Conread position: 205-876
Cow position:
Alignm length: 710
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 101

Conread position: 217-596
Cow position:
Alignm length: 394
Alignm identity: 271
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 156, 29

Conread position: 218-874
Cow position:
Alignm length: 696
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 45

Conread position: 248-735
Cow position:
Alignm length: 520
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 0

Conread position: 253-876
Cow position:
Alignm length: 656
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 11

Conread position: 255-702
Cow position:
Alignm length: 474
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 194

Conread position: 256-869
Cow position:
Alignm length: 647
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 41

Conread position: 275-876
Cow position:
Alignm length: 632
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 149

Conread position: 276-876
Cow position:
Alignm length: 647
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 224

Conread position: 292-653
Cow position:
Alignm length: 391
Alignm identity: 264
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 77, 29

Conread position: 295-876
Cow position:
Alignm length: 623
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 469

Conread position: 302-668
Cow position:
Alignm length: 388
Alignm identity: 252
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 223, 35

Conread position: 302-876
Cow position:
Alignm length: 617
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 171

Conread position: 348-869
Cow position:
Alignm length: 552
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 50

Conread position: 349-874
Cow position:
Alignm length: 563
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 263

Conread position: 356-876
Cow position:
Alignm length: 548
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 317

Conread position: 358-612
Cow position:
Alignm length: 268
Alignm identity: 189
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 12, 26

Conread position: 365-875
Cow position:
Alignm length: 543
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 188

Conread position: 372-875
Cow position:
Alignm length: 542
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 278

Conread position: 379-876
Cow position:
Alignm length: 529
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 132

Conread position: 384-876
Cow position:
Alignm length: 523
Alignm identity: 323
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 38, 63

Conread position: 409-869
Cow position:
Alignm length: 491
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 367

Conread position: 409-876
Cow position:
Alignm length: 499
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 373

Conread position: 409-876
Cow position:
Alignm length: 485
Alignm identity: 305
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 120, 35

Conread position: 410-803
Cow position:
Alignm length: 428
Alignm identity: 297
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 42, 265

Conread position: 433-874
Cow position:
Alignm length: 474
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 343

Conread position: 447-876
Cow position:
Alignm length: 457
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 323

Conread position: 458-876
Cow position:
Alignm length: 436
Alignm identity: 292
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 19

Conread position: 462-876
Cow position:
Alignm length: 451
Alignm identity: 303
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 54, 318

Conread position: 469-874
Cow position:
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 27

Conread position: 484-743
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 16, 167

Conread position: 491-876
Cow position:
Alignm length: 413
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 131

Conread position: 495-876
Cow position:
Alignm length: 399
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 166

Conread position: 501-835
Cow position:
Alignm length: 340
Alignm identity: 235
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 176, 25

Conread position: 510-867
Cow position:
Alignm length: 379
Alignm identity: 250
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 19, 61

Conread position: 540-872
Cow position:
Alignm length: 353
Alignm identity: 228
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 542-876
Cow position:
Alignm length: 356
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 225

Conread position: 557-874
Cow position:
Alignm length: 336
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 56

Conread position: 577-875
Cow position:
Alignm length: 315
Alignm identity: 220
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 15, 168

Conread position: 591-876
Cow position:
Alignm length: 295
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 8

Conread position: 591-876
Cow position:
Alignm length: 295
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 8

Conread position: 604-869
Cow position:
Alignm length: 268
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 103, 151

Conread position: 604-876
Cow position:
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 604-876
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 73, 87

Conread position: 604-876
Cow position:
Alignm length: 279
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 66, 216

Conread position: 604-876
Cow position:
Alignm length: 274
Alignm identity: 194
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 158, 102

Conread position: 604-876
Cow position:
Alignm length: 282
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 151

Conread position: 604-915
Cow position:
Alignm length: 314
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 157, 71

Conread position: 613-876
Cow position:
Alignm length: 272
Alignm identity: 192
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 90, 145

Conread position: 623-876
Cow position:
Alignm length: 263
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 138

Conread position: 706-874
Cow position:
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 47

Conread position: 709-874
Cow position:
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 729-876
Cow position:
Alignm length: 151
Alignm identity: 119
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 886-1064
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 39, 61

Conread position: 886-1065
Cow position:
Alignm length: 182
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 167, 22

Conread position: 890-1054
Cow position:
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 899-1065
Cow position:
Alignm length: 169
Alignm identity: 136
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 157, 40

Conread position: 900-1051
Cow position:
Alignm length: 152
Alignm identity: 125
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.