Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039M03.5 |
| Conread position: | 4-337 |
| Cow position: | chr10:9031331-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 47, 54 |
| Conread position: | 4-586 |
| Cow position: | chr10:21939078-21938496 (view UCSC Genome Browser custom track) |
| Alignm length: | 599 |
| Alignm identity: | 375 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 63, 42 |
| Conread position: | 4-659 |
| Cow position: | chr10:9010490-9009835 (view UCSC Genome Browser custom track) |
| Alignm length: | 659 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 117 |
| Conread position: | 4-733 |
| Cow position: | chr10:9010572-9009845 (view UCSC Genome Browser custom track) |
| Alignm length: | 736 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 11 |
| Conread position: | 4-763 |
| Cow position: | chr10:8996762-8996003 (view UCSC Genome Browser custom track) |
| Alignm length: | 761 |
| Alignm identity: | 513 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 207 |
| Conread position: | 4-779 |
| Cow position: | chr10:8996678-8995912 (view UCSC Genome Browser custom track) |
| Alignm length: | 779 |
| Alignm identity: | 516 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 554, 558 |
| Conread position: | 5-421 |
| Cow position: | chr10:9031248-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 39, 52 |
| Conread position: | 5-837 |
| Cow position: | chr10:8996845-8996013 (view UCSC Genome Browser custom track) |
| Alignm length: | 837 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 42 |
| Conread position: | 29-543 |
| Cow position: | chr10:21939137-21938626 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 336 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 14, 28 |
| Conread position: | 77-812 |
| Cow position: | chr10:9010585-9009849 (view UCSC Genome Browser custom track) |
| Alignm length: | 746 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 101-757 |
| Cow position: | chr10:9031260-9031896 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 177, 173 |
| Conread position: | 112-706 |
| Cow position: | chr10:21939222-21938631 (view UCSC Genome Browser custom track) |
| Alignm length: | 600 |
| Alignm identity: | 368 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 203, 208 |
| Conread position: | 140-797 |
| Cow position: | chr10:8996878-8996221 (view UCSC Genome Browser custom track) |
| Alignm length: | 658 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 157-831 |
| Cow position: | chr10:9010589-9009915 (view UCSC Genome Browser custom track) |
| Alignm length: | 678 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 159 |
| Conread position: | 186-589 |
| Cow position: | chr10:9031261-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 124 |
| Conread position: | 221-855 |
| Cow position: | chr10:8996881-8996248 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 78 |
| Conread position: | 237-837 |
| Cow position: | chr10:9031228-9031809 (view UCSC Genome Browser custom track) |
| Alignm length: | 603 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 74 |
| Conread position: | 280-802 |
| Cow position: | chr10:21939222-21938702 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 324 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 108, 113 |
| Conread position: | 305-831 |
| Cow position: | chr10:9031613-9032138 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 308 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 85, 89 |
| Conread position: | 363-791 |
| Cow position: | chr10:21939223-21938795 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 280 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 32, 20 |
| Conread position: | 409-790 |
| Cow position: | chr10:9031232-9031613 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 67 |
| Conread position: | 497-838 |
| Cow position: | chr10:9010585-9010244 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 144, 150 |
| Conread position: | 593-838 |
| Cow position: | chr10:9031248-9031493 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 117, 112 |
Show alignments to all cow chromosomes.