Cow genome map

Conread name: Ss1.1-Pig4-TMW8039M03.5

Conread position: 1-198
Cow position:
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 178, 0

Conread position: 1-729
Cow position:
Alignm length: 738
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 67

Conread position: 1-806
Cow position:
Alignm length: 812
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 71

Conread position: 2-677
Cow position:
Alignm length: 683
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 66

Conread position: 2-797
Cow position:
Alignm length: 799
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 66

Conread position: 4-377
Cow position:
Alignm length: 375
Alignm identity: 228
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 216, 203

Conread position: 4-428
Cow position:
Alignm length: 428
Alignm identity: 270
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 41, 47

Conread position: 4-454
Cow position:
Alignm length: 451
Alignm identity: 267
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 434, 0

Conread position: 4-455
Cow position:
Alignm length: 455
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 61

Conread position: 4-500
Cow position:
Alignm length: 500
Alignm identity: 295
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 145, 134

Conread position: 4-511
Cow position:
Alignm length: 520
Alignm identity: 317
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 40, 55

Conread position: 4-524
Cow position:
Alignm length: 525
Alignm identity: 322
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 147, 143

Conread position: 4-535
Cow position:
Alignm length: 534
Alignm identity: 326
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 30, 44

Conread position: 4-632
Cow position:
Alignm length: 634
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 55

Conread position: 4-690
Cow position:
Alignm length: 688
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 46

Conread position: 4-707
Cow position:
Alignm length: 720
Alignm identity: 437
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 57, 43

Conread position: 4-715
Cow position:
Alignm length: 713
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 628, 642

Conread position: 4-716
Cow position:
Alignm length: 713
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-717
Cow position:
Alignm length: 716
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 130

Conread position: 4-761
Cow position:
Alignm length: 764
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 139

Conread position: 4-763
Cow position:
Alignm length: 760
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 506, 0

Conread position: 4-765
Cow position:
Alignm length: 768
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 315

Conread position: 4-776
Cow position:
Alignm length: 776
Alignm identity: 446
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 228, 221

Conread position: 4-777
Cow position:
Alignm length: 780
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 64

Conread position: 4-786
Cow position:
Alignm length: 785
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 590, 635

Conread position: 4-793
Cow position:
Alignm length: 794
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 392, 378

Conread position: 4-797
Cow position:
Alignm length: 801
Alignm identity: 457
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 233, 226

Conread position: 4-797
Cow position:
Alignm length: 795
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 653, 627

Conread position: 4-797
Cow position:
Alignm length: 802
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 270

Conread position: 4-797
Cow position:
Alignm length: 797
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 558, 547

Conread position: 4-799
Cow position:
Alignm length: 802
Alignm identity: 459
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 208, 214

Conread position: 4-802
Cow position:
Alignm length: 801
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 567, 561

Conread position: 4-802
Cow position:
Alignm length: 808
Alignm identity: 474
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 208, 227

Conread position: 4-805
Cow position:
Alignm length: 811
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 49

Conread position: 4-806
Cow position:
Alignm length: 807
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 51

Conread position: 4-807
Cow position:
Alignm length: 811
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 44

Conread position: 4-829
Cow position:
Alignm length: 829
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 325

Conread position: 4-829
Cow position:
Alignm length: 831
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 81

Conread position: 4-829
Cow position:
Alignm length: 828
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 52

Conread position: 4-830
Cow position:
Alignm length: 828
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 638, 344

Conread position: 4-830
Cow position:
Alignm length: 830
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 64

Conread position: 4-830
Cow position:
Alignm length: 836
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 49

Conread position: 4-836
Cow position:
Alignm length: 836
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 203

Conread position: 4-836
Cow position:
Alignm length: 837
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 51

Conread position: 4-836
Cow position:
Alignm length: 841
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 139

Conread position: 4-836
Cow position:
Alignm length: 838
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 475, 463

Conread position: 4-836
Cow position:
Alignm length: 842
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 90

Conread position: 4-836
Cow position:
Alignm length: 840
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 296

Conread position: 4-837
Cow position:
Alignm length: 843
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 380, 393

Conread position: 4-839
Cow position:
Alignm length: 839
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 139

Conread position: 4-846
Cow position:
Alignm length: 843
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-846
Cow position:
Alignm length: 846
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 198

Conread position: 4-870
Cow position:
Alignm length: 869
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 136

Conread position: 4-870
Cow position:
Alignm length: 871
Alignm identity: 645
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 43

Conread position: 4-870
Cow position:
Alignm length: 867
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 843, 0

Conread position: 5-791
Cow position:
Alignm length: 790
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 50

Conread position: 5-793
Cow position:
Alignm length: 796
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 116

Conread position: 5-797
Cow position:
Alignm length: 796
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 5-800
Cow position:
Alignm length: 798
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 202

Conread position: 5-806
Cow position:
Alignm length: 810
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 230

Conread position: 5-874
Cow position:
Alignm length: 873
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 311

Conread position: 6-828
Cow position:
Alignm length: 831
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 50

Conread position: 6-867
Cow position:
Alignm length: 868
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 44

Conread position: 6-870
Cow position:
Alignm length: 865
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 841, 0

Conread position: 6-870
Cow position:
Alignm length: 867
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 808, 801

Conread position: 6-870
Cow position:
Alignm length: 868
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 137

Conread position: 7-856
Cow position:
Alignm length: 850
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 840, 0

Conread position: 11-836
Cow position:
Alignm length: 830
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 7

Conread position: 24-797
Cow position:
Alignm length: 782
Alignm identity: 455
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 128, 114

Conread position: 25-807
Cow position:
Alignm length: 790
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 85

Conread position: 25-846
Cow position:
Alignm length: 826
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 69

Conread position: 28-797
Cow position:
Alignm length: 778
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 119

Conread position: 28-797
Cow position:
Alignm length: 775
Alignm identity: 445
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 204, 181

Conread position: 28-855
Cow position:
Alignm length: 833
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 110

Conread position: 58-845
Cow position:
Alignm length: 792
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 239, 253

Conread position: 67-753
Cow position:
Alignm length: 691
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 80

Conread position: 67-836
Cow position:
Alignm length: 774
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 233

Conread position: 67-870
Cow position:
Alignm length: 808
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 154

Conread position: 75-801
Cow position:
Alignm length: 734
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 17

Conread position: 77-636
Cow position:
Alignm length: 563
Alignm identity: 345
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 44, 55

Conread position: 87-676
Cow position:
Alignm length: 592
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 125

Conread position: 88-836
Cow position:
Alignm length: 754
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 388

Conread position: 88-838
Cow position:
Alignm length: 754
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 386

Conread position: 95-856
Cow position:
Alignm length: 767
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 75

Conread position: 102-797
Cow position:
Alignm length: 697
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 124

Conread position: 103-797
Cow position:
Alignm length: 697
Alignm identity: 400
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 447, 460

Conread position: 109-407
Cow position:
Alignm length: 299
Alignm identity: 184
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 141-857
Cow position:
Alignm length: 721
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 246

Conread position: 141-870
Cow position:
Alignm length: 734
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 66

Conread position: 143-836
Cow position:
Alignm length: 697
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 74

Conread position: 148-837
Cow position:
Alignm length: 693
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 115

Conread position: 157-720
Cow position:
Alignm length: 569
Alignm identity: 346
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 53, 68

Conread position: 159-802
Cow position:
Alignm length: 648
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 47

Conread position: 160-760
Cow position:
Alignm length: 602
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 580, 575

Conread position: 162-857
Cow position:
Alignm length: 699
Alignm identity: 405
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 78, 86

Conread position: 166-797
Cow position:
Alignm length: 638
Alignm identity: 381
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 55, 48

Conread position: 167-572
Cow position:
Alignm length: 407
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 306

Conread position: 193-462
Cow position:
Alignm length: 271
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 201, 45

Conread position: 193-836
Cow position:
Alignm length: 650
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 120

Conread position: 215-801
Cow position:
Alignm length: 594
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 29

Conread position: 225-830
Cow position:
Alignm length: 614
Alignm identity: 377
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 21, 28

Conread position: 233-776
Cow position:
Alignm length: 547
Alignm identity: 334
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 45, 41

Conread position: 235-836
Cow position:
Alignm length: 605
Alignm identity: 359
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 79, 100

Conread position: 241-836
Cow position:
Alignm length: 598
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 388

Conread position: 243-806
Cow position:
Alignm length: 567
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 161

Conread position: 251-629
Cow position:
Alignm length: 381
Alignm identity: 246
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 47, 52

Conread position: 253-830
Cow position:
Alignm length: 584
Alignm identity: 343
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 57, 45

Conread position: 315-836
Cow position:
Alignm length: 525
Alignm identity: 329
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 59, 12

Conread position: 317-806
Cow position:
Alignm length: 494
Alignm identity: 310
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 71, 64

Conread position: 321-797
Cow position:
Alignm length: 480
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 227

Conread position: 335-766
Cow position:
Alignm length: 433
Alignm identity: 276
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 46, 52

Conread position: 402-797
Cow position:
Alignm length: 398
Alignm identity: 256
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 64, 74

Conread position: 403-860
Cow position:
Alignm length: 459
Alignm identity: 270
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 168, 164

Conread position: 411-836
Cow position:
Alignm length: 430
Alignm identity: 263
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 29

Conread position: 486-838
Cow position:
Alignm length: 356
Alignm identity: 233
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 93, 98

Conread position: 587-798
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.