Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039M03.5 |
| Conread position: | 1-807 |
| Cow position: | chr17:22473171-22473971 (view UCSC Genome Browser custom track) |
| Alignm length: | 811 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 31 |
| Conread position: | 1-868 |
| Cow position: | chr17:22499396-22498531 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 637, 627 |
| Conread position: | 2-832 |
| Cow position: | chr17:22590270-22589440 (view UCSC Genome Browser custom track) |
| Alignm length: | 837 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 116 |
| Conread position: | 4-354 |
| Cow position: | chr17:22451959-22451609 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-429 |
| Cow position: | chr17:22589596-22589173 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 273 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 4-594 |
| Cow position: | chr17:22452295-22451705 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 133 |
| Conread position: | 4-705 |
| Cow position: | chr17:22552178-22551477 (view UCSC Genome Browser custom track) |
| Alignm length: | 707 |
| Alignm identity: | 448 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 4-776 |
| Cow position: | chr17:22552262-22551490 (view UCSC Genome Browser custom track) |
| Alignm length: | 781 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 43 |
| Conread position: | 4-837 |
| Cow position: | chr17:22590184-22589351 (view UCSC Genome Browser custom track) |
| Alignm length: | 842 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 4-838 |
| Cow position: | chr17:22552346-22551512 (view UCSC Genome Browser custom track) |
| Alignm length: | 841 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 232 |
| Conread position: | 4-838 |
| Cow position: | chr17:22552430-22551596 (view UCSC Genome Browser custom track) |
| Alignm length: | 844 |
| Alignm identity: | 547 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 40 |
| Conread position: | 4-838 |
| Cow position: | chr17:22552682-22551848 (view UCSC Genome Browser custom track) |
| Alignm length: | 843 |
| Alignm identity: | 543 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 81 |
| Conread position: | 4-838 |
| Cow position: | chr17:22552766-22551932 (view UCSC Genome Browser custom track) |
| Alignm length: | 841 |
| Alignm identity: | 556 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 43 |
| Conread position: | 4-838 |
| Cow position: | chr17:22552850-22552016 (view UCSC Genome Browser custom track) |
| Alignm length: | 843 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 4-838 |
| Cow position: | chr17:22553102-22552268 (view UCSC Genome Browser custom track) |
| Alignm length: | 843 |
| Alignm identity: | 526 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 37 |
| Conread position: | 4-838 |
| Cow position: | chr17:22590100-22589266 (view UCSC Genome Browser custom track) |
| Alignm length: | 841 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 139 |
| Conread position: | 4-857 |
| Cow position: | chr17:22552934-22552082 (view UCSC Genome Browser custom track) |
| Alignm length: | 861 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 138 |
| Conread position: | 6-370 |
| Cow position: | chr17:22452041-22451677 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 218, 205 |
| Conread position: | 6-838 |
| Cow position: | chr17:22590014-22589182 (view UCSC Genome Browser custom track) |
| Alignm length: | 838 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 138 |
| Conread position: | 7-797 |
| Cow position: | chr17:41441118-41440328 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 445 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 248, 231 |
| Conread position: | 7-838 |
| Cow position: | chr17:22552595-22551764 (view UCSC Genome Browser custom track) |
| Alignm length: | 840 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 8-774 |
| Cow position: | chr17:22452375-22451609 (view UCSC Genome Browser custom track) |
| Alignm length: | 771 |
| Alignm identity: | 490 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 198 |
| Conread position: | 14-714 |
| Cow position: | chr17:22473262-22473963 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 463 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 117 |
| Conread position: | 54-841 |
| Cow position: | chr17:22452413-22451626 (view UCSC Genome Browser custom track) |
| Alignm length: | 790 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 67 |
| Conread position: | 59-797 |
| Cow position: | chr17:22590297-22589559 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 466 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 143 |
| Conread position: | 88-829 |
| Cow position: | chr17:22553102-22552361 (view UCSC Genome Browser custom track) |
| Alignm length: | 744 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 119 |
| Conread position: | 88-832 |
| Cow position: | chr17:22473174-22473912 (view UCSC Genome Browser custom track) |
| Alignm length: | 748 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 28 |
| Conread position: | 140-831 |
| Cow position: | chr17:22590300-22589609 (view UCSC Genome Browser custom track) |
| Alignm length: | 695 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 169 |
| Conread position: | 146-838 |
| Cow position: | chr17:22553129-22552436 (view UCSC Genome Browser custom track) |
| Alignm length: | 699 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 163 |
| Conread position: | 150-788 |
| Cow position: | chr17:22452401-22451763 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 417, 422 |
| Conread position: | 216-797 |
| Cow position: | chr17:22499433-22498852 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 218-838 |
| Cow position: | chr17:22590306-22589686 (view UCSC Genome Browser custom track) |
| Alignm length: | 623 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 258 |
| Conread position: | 314-838 |
| Cow position: | chr17:22499419-22498895 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 503-839 |
| Cow position: | chr17:22499398-22499062 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.