Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039M03.5 |
| Conread position: | 1-682 |
| Cow position: | chr19:14960391-14959714 (view UCSC Genome Browser custom track) |
| Alignm length: | 684 |
| Alignm identity: | 455 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 235, 210 |
| Conread position: | 4-501 |
| Cow position: | chr19:14940579-14941076 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 320 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 399, 395 |
| Conread position: | 4-517 |
| Cow position: | chr19:23614611-23615124 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 140 |
| Conread position: | 4-597 |
| Cow position: | chr19:23649893-23650486 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 386, 391 |
| Conread position: | 4-599 |
| Cow position: | chr19:23597116-23597711 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 270 |
| Conread position: | 4-614 |
| Cow position: | chr19:20635630-20635020 (view UCSC Genome Browser custom track) |
| Alignm length: | 615 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 203 |
| Conread position: | 4-755 |
| Cow position: | chr19:43570379-43569642 (view UCSC Genome Browser custom track) |
| Alignm length: | 757 |
| Alignm identity: | 486 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 44 |
| Conread position: | 4-758 |
| Cow position: | chr19:14959566-14958827 (view UCSC Genome Browser custom track) |
| Alignm length: | 758 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 134 |
| Conread position: | 4-771 |
| Cow position: | chr19:20678038-20678802 (view UCSC Genome Browser custom track) |
| Alignm length: | 772 |
| Alignm identity: | 502 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 131 |
| Conread position: | 4-774 |
| Cow position: | chr19:23596951-23597718 (view UCSC Genome Browser custom track) |
| Alignm length: | 775 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 148, 81 |
| Conread position: | 4-791 |
| Cow position: | chr19:23613855-23614642 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 203 |
| Conread position: | 4-797 |
| Cow position: | chr19:14959649-14958872 (view UCSC Genome Browser custom track) |
| Alignm length: | 797 |
| Alignm identity: | 519 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 15 |
| Conread position: | 4-797 |
| Cow position: | chr19:23614191-23614984 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 533 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 4-799 |
| Cow position: | chr19:23649557-23650352 (view UCSC Genome Browser custom track) |
| Alignm length: | 796 |
| Alignm identity: | 518 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-804 |
| Cow position: | chr19:20677870-20678670 (view UCSC Genome Browser custom track) |
| Alignm length: | 810 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 160 |
| Conread position: | 4-828 |
| Cow position: | chr19:23649641-23650465 (view UCSC Genome Browser custom track) |
| Alignm length: | 828 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 4-830 |
| Cow position: | chr19:14940243-14941069 (view UCSC Genome Browser custom track) |
| Alignm length: | 830 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 44 |
| Conread position: | 4-832 |
| Cow position: | chr19:14940159-14940987 (view UCSC Genome Browser custom track) |
| Alignm length: | 829 |
| Alignm identity: | 548 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 4-837 |
| Cow position: | chr19:23614275-23615108 (view UCSC Genome Browser custom track) |
| Alignm length: | 838 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 4-838 |
| Cow position: | chr19:14960138-14959320 (view UCSC Genome Browser custom track) |
| Alignm length: | 842 |
| Alignm identity: | 544 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 203 |
| Conread position: | 4-838 |
| Cow position: | chr19:23613351-23614185 (view UCSC Genome Browser custom track) |
| Alignm length: | 838 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 203 |
| Conread position: | 4-838 |
| Cow position: | chr19:23613519-23614353 (view UCSC Genome Browser custom track) |
| Alignm length: | 839 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 54 |
| Conread position: | 4-838 |
| Cow position: | chr19:23614023-23614857 (view UCSC Genome Browser custom track) |
| Alignm length: | 842 |
| Alignm identity: | 551 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 47 |
| Conread position: | 4-838 |
| Cow position: | chr19:23614107-23614941 (view UCSC Genome Browser custom track) |
| Alignm length: | 840 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 55 |
| Conread position: | 4-838 |
| Cow position: | chr19:23649473-23650307 (view UCSC Genome Browser custom track) |
| Alignm length: | 838 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 149, 132 |
| Conread position: | 4-845 |
| Cow position: | chr19:23649305-23650146 (view UCSC Genome Browser custom track) |
| Alignm length: | 846 |
| Alignm identity: | 537 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 55 |
| Conread position: | 4-846 |
| Cow position: | chr19:23613435-23614277 (view UCSC Genome Browser custom track) |
| Alignm length: | 846 |
| Alignm identity: | 563 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 137, 118 |
| Conread position: | 4-855 |
| Cow position: | chr19:23613603-23614453 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 310, 304 |
| Conread position: | 4-855 |
| Cow position: | chr19:23649389-23650239 (view UCSC Genome Browser custom track) |
| Alignm length: | 855 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 4-856 |
| Cow position: | chr19:23613771-23614622 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 579 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 53 |
| Conread position: | 4-856 |
| Cow position: | chr19:23613939-23614790 (view UCSC Genome Browser custom track) |
| Alignm length: | 856 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 309, 298 |
| Conread position: | 4-857 |
| Cow position: | chr19:20677534-20678386 (view UCSC Genome Browser custom track) |
| Alignm length: | 862 |
| Alignm identity: | 568 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 47 |
| Conread position: | 4-870 |
| Cow position: | chr19:14940075-14940937 (view UCSC Genome Browser custom track) |
| Alignm length: | 869 |
| Alignm identity: | 586 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 451, 466 |
| Conread position: | 4-870 |
| Cow position: | chr19:20677786-20678648 (view UCSC Genome Browser custom track) |
| Alignm length: | 875 |
| Alignm identity: | 576 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 48 |
| Conread position: | 5-451 |
| Cow position: | chr19:14948462-14948017 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 398, 62 |
| Conread position: | 5-846 |
| Cow position: | chr19:23596868-23597706 (view UCSC Genome Browser custom track) |
| Alignm length: | 848 |
| Alignm identity: | 550 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 7-523 |
| Cow position: | chr19:14915967-14916470 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 333 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 51, 79 |
| Conread position: | 14-669 |
| Cow position: | chr19:14940421-14941076 (view UCSC Genome Browser custom track) |
| Alignm length: | 663 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 222, 211 |
| Conread position: | 63-599 |
| Cow position: | chr19:43570247-43569712 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 76 |
| Conread position: | 66-783 |
| Cow position: | chr19:14960410-14959700 (view UCSC Genome Browser custom track) |
| Alignm length: | 720 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 505, 257 |
| Conread position: | 78-797 |
| Cow position: | chr19:20677440-20678159 (view UCSC Genome Browser custom track) |
| Alignm length: | 726 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 158 |
| Conread position: | 88-716 |
| Cow position: | chr19:20635630-20635002 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 68 |
| Conread position: | 88-857 |
| Cow position: | chr19:14939989-14940759 (view UCSC Genome Browser custom track) |
| Alignm length: | 773 |
| Alignm identity: | 521 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 465 |
| Conread position: | 91-500 |
| Cow position: | chr19:14948459-14948052 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 98-829 |
| Cow position: | chr19:43570452-43569732 (view UCSC Genome Browser custom track) |
| Alignm length: | 734 |
| Alignm identity: | 492 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 59 |
| Conread position: | 101-797 |
| Cow position: | chr19:20635701-20635005 (view UCSC Genome Browser custom track) |
| Alignm length: | 701 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 301 |
| Conread position: | 140-799 |
| Cow position: | chr19:14959680-14959038 (view UCSC Genome Browser custom track) |
| Alignm length: | 666 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 29 |
| Conread position: | 140-810 |
| Cow position: | chr19:14915853-14916508 (view UCSC Genome Browser custom track) |
| Alignm length: | 682 |
| Alignm identity: | 427 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 98, 49 |
| Conread position: | 149-797 |
| Cow position: | chr19:14960411-14959767 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 58 |
| Conread position: | 157-838 |
| Cow position: | chr19:20635729-20635048 (view UCSC Genome Browser custom track) |
| Alignm length: | 690 |
| Alignm identity: | 449 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 14 |
| Conread position: | 162-870 |
| Cow position: | chr19:20677440-20678144 (view UCSC Genome Browser custom track) |
| Alignm length: | 713 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 140 |
| Conread position: | 169-831 |
| Cow position: | chr19:14960475-14959815 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 441 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 318, 306 |
| Conread position: | 215-712 |
| Cow position: | chr19:14948505-14948008 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 223-832 |
| Cow position: | chr19:14939959-14940567 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 249-856 |
| Cow position: | chr19:20677359-20677965 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 50 |
| Conread position: | 313-838 |
| Cow position: | chr19:14960415-14959892 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 237 |
| Conread position: | 319-796 |
| Cow position: | chr19:14948484-14948008 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 298 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 406, 80 |
| Conread position: | 322-838 |
| Cow position: | chr19:14939973-14940489 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 337-829 |
| Cow position: | chr19:23649302-23649794 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 302 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 44, 57 |
| Conread position: | 340-846 |
| Cow position: | chr19:23613351-23613857 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 350-838 |
| Cow position: | chr19:43570452-43569975 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 34 |
| Conread position: | 394-845 |
| Cow position: | chr19:14939962-14940412 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 487-802 |
| Cow position: | chr19:14948484-14948170 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 155, 80 |
| Conread position: | 638-838 |
| Cow position: | chr19:14960426-14960226 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.