Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039M03.5 |
| Conread position: | 1-544 |
| Cow position: | chr2:86465600-86466144 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 316 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 164, 154 |
| Conread position: | 4-511 |
| Cow position: | chr2:78755837-78756343 (view UCSC Genome Browser custom track) |
| Alignm length: | 512 |
| Alignm identity: | 322 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 47, 53 |
| Conread position: | 4-629 |
| Cow position: | chr2:86465519-86466144 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 389 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 53, 39 |
| Conread position: | 4-673 |
| Cow position: | chr2:82799779-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 676 |
| Alignm identity: | 440 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 57 |
| Conread position: | 4-757 |
| Cow position: | chr2:82799695-82800448 (view UCSC Genome Browser custom track) |
| Alignm length: | 755 |
| Alignm identity: | 462 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 650, 623 |
| Conread position: | 4-798 |
| Cow position: | chr2:78755253-78756043 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 219, 81 |
| Conread position: | 4-799 |
| Cow position: | chr2:5874929-5874134 (view UCSC Genome Browser custom track) |
| Alignm length: | 803 |
| Alignm identity: | 461 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 116, 139 |
| Conread position: | 4-831 |
| Cow position: | chr2:82799611-82800438 (view UCSC Genome Browser custom track) |
| Alignm length: | 833 |
| Alignm identity: | 536 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 484, 473 |
| Conread position: | 4-837 |
| Cow position: | chr2:78755169-78755998 (view UCSC Genome Browser custom track) |
| Alignm length: | 837 |
| Alignm identity: | 531 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 168 |
| Conread position: | 4-838 |
| Cow position: | chr2:82799527-82800361 (view UCSC Genome Browser custom track) |
| Alignm length: | 836 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 650, 625 |
| Conread position: | 4-857 |
| Cow position: | chr2:78754263-78755097 (view UCSC Genome Browser custom track) |
| Alignm length: | 857 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 223, 181 |
| Conread position: | 4-857 |
| Cow position: | chr2:78754917-78755765 (view UCSC Genome Browser custom track) |
| Alignm length: | 858 |
| Alignm identity: | 554 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 52 |
| Conread position: | 6-792 |
| Cow position: | chr2:78755589-78756371 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 497 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 6-830 |
| Cow position: | chr2:78754835-78755657 (view UCSC Genome Browser custom track) |
| Alignm length: | 827 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 51 |
| Conread position: | 6-857 |
| Cow position: | chr2:82799447-82800295 (view UCSC Genome Browser custom track) |
| Alignm length: | 855 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 449, 11 |
| Conread position: | 7-846 |
| Cow position: | chr2:78755507-78756342 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 6 |
| Conread position: | 7-857 |
| Cow position: | chr2:78754101-78754929 (view UCSC Genome Browser custom track) |
| Alignm length: | 858 |
| Alignm identity: | 527 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 10-797 |
| Cow position: | chr2:86465357-86466144 (view UCSC Genome Browser custom track) |
| Alignm length: | 802 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 254 |
| Conread position: | 64-857 |
| Cow position: | chr2:78754809-78755599 (view UCSC Genome Browser custom track) |
| Alignm length: | 798 |
| Alignm identity: | 524 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 73 |
| Conread position: | 66-788 |
| Cow position: | chr2:5875119-5874397 (view UCSC Genome Browser custom track) |
| Alignm length: | 728 |
| Alignm identity: | 418 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 165, 151 |
| Conread position: | 66-797 |
| Cow position: | chr2:86465329-86466060 (view UCSC Genome Browser custom track) |
| Alignm length: | 741 |
| Alignm identity: | 439 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 229, 245 |
| Conread position: | 67-798 |
| Cow position: | chr2:86465162-86465893 (view UCSC Genome Browser custom track) |
| Alignm length: | 738 |
| Alignm identity: | 445 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 71 |
| Conread position: | 149-830 |
| Cow position: | chr2:5875120-5874439 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 404 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 163, 149 |
| Conread position: | 174-620 |
| Cow position: | chr2:48689539-48689093 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 283 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 226-797 |
| Cow position: | chr2:86464985-86465556 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 333 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 165, 156 |
| Conread position: | 229-798 |
| Cow position: | chr2:86465072-86465641 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 347 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 177, 181 |
| Conread position: | 249-868 |
| Cow position: | chr2:78754091-78754703 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 372 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 54, 60 |
| Conread position: | 390-832 |
| Cow position: | chr2:86464981-86465423 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 263 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 145, 153 |
Show alignments to all cow chromosomes.