Cow genome map

Conread name: Ss1.1-Pig4-TMW8039M03.5

Conread position: 4-352
Cow position:
Alignm length: 351
Alignm identity: 233
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 217, 196

Conread position: 4-433
Cow position:
Alignm length: 431
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 203

Conread position: 4-503
Cow position:
Alignm length: 501
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 199

Conread position: 4-616
Cow position:
Alignm length: 616
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 227

Conread position: 4-757
Cow position:
Alignm length: 757
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 399, 395

Conread position: 4-768
Cow position:
Alignm length: 766
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 554, 565

Conread position: 4-777
Cow position:
Alignm length: 777
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 400, 395

Conread position: 4-792
Cow position:
Alignm length: 790
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 203

Conread position: 4-831
Cow position:
Alignm length: 828
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-832
Cow position:
Alignm length: 830
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 204

Conread position: 4-832
Cow position:
Alignm length: 829
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-838
Cow position:
Alignm length: 838
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 731, 736

Conread position: 4-845
Cow position:
Alignm length: 844
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 539, 533

Conread position: 4-846
Cow position:
Alignm length: 846
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 274, 270

Conread position: 4-856
Cow position:
Alignm length: 856
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 271

Conread position: 4-857
Cow position:
Alignm length: 854
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 843, 0

Conread position: 5-357
Cow position:
Alignm length: 353
Alignm identity: 221
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 338, 0

Conread position: 13-607
Cow position:
Alignm length: 595
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 56-685
Cow position:
Alignm length: 631
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 66-836
Cow position:
Alignm length: 772
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 697, 704

Conread position: 71-450
Cow position:
Alignm length: 380
Alignm identity: 242
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 367, 0

Conread position: 107-303
Cow position:
Alignm length: 198
Alignm identity: 146
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 106, 93

Conread position: 141-837
Cow position:
Alignm length: 700
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 430, 426

Conread position: 159-755
Cow position:
Alignm length: 597
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 175-545
Cow position:
Alignm length: 373
Alignm identity: 239
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 142, 129

Conread position: 187-382
Cow position:
Alignm length: 197
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 127, 99

Conread position: 226-852
Cow position:
Alignm length: 627
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 236-857
Cow position:
Alignm length: 624
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 64

Conread position: 241-862
Cow position:
Alignm length: 622
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 605, 0

Conread position: 257-463
Cow position:
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 138, 111

Conread position: 266-550
Cow position:
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 129, 116

Conread position: 341-702
Cow position:
Alignm length: 364
Alignm identity: 234
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 147, 133

Conread position: 352-857
Cow position:
Alignm length: 508
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 42

Conread position: 425-786
Cow position:
Alignm length: 363
Alignm identity: 222
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 231, 226

Conread position: 493-832
Cow position:
Alignm length: 344
Alignm identity: 223
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 45, 55

Conread position: 523-733
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 22

Conread position: 593-838
Cow position:
Alignm length: 246
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 606-802
Cow position:
Alignm length: 198
Alignm identity: 138
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 120, 113

Show alignments to all cow chromosomes.