Cow genome map

Conread name: Ss1.1-Pig4-TMW8039M03.5

Conread position: 2-797
Cow position:
Alignm length: 800
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 41

Conread position: 4-199
Cow position:
Alignm length: 196
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 4-323
Cow position:
Alignm length: 323
Alignm identity: 208
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 45

Conread position: 4-333
Cow position:
Alignm length: 331
Alignm identity: 209
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 225, 232

Conread position: 4-368
Cow position:
Alignm length: 367
Alignm identity: 221
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 42

Conread position: 4-438
Cow position:
Alignm length: 435
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 431, 0

Conread position: 4-459
Cow position:
Alignm length: 476
Alignm identity: 301
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 44, 55

Conread position: 4-502
Cow position:
Alignm length: 500
Alignm identity: 288
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 259, 212

Conread position: 4-513
Cow position:
Alignm length: 512
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 87

Conread position: 4-549
Cow position:
Alignm length: 554
Alignm identity: 345
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 64, 44

Conread position: 4-563
Cow position:
Alignm length: 565
Alignm identity: 340
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 263, 201

Conread position: 4-563
Cow position:
Alignm length: 561
Alignm identity: 321
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 389, 315

Conread position: 4-594
Cow position:
Alignm length: 595
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 162

Conread position: 4-601
Cow position:
Alignm length: 598
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 4-668
Cow position:
Alignm length: 671
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 44

Conread position: 4-682
Cow position:
Alignm length: 688
Alignm identity: 412
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 148, 143

Conread position: 4-717
Cow position:
Alignm length: 721
Alignm identity: 437
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 137, 80

Conread position: 4-717
Cow position:
Alignm length: 717
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 218, 203

Conread position: 4-748
Cow position:
Alignm length: 750
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 118

Conread position: 4-763
Cow position:
Alignm length: 774
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 205

Conread position: 4-791
Cow position:
Alignm length: 794
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 117

Conread position: 4-791
Cow position:
Alignm length: 797
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 123

Conread position: 4-792
Cow position:
Alignm length: 796
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 53

Conread position: 4-794
Cow position:
Alignm length: 801
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 53

Conread position: 4-797
Cow position:
Alignm length: 799
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 52

Conread position: 4-797
Cow position:
Alignm length: 797
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 55

Conread position: 4-806
Cow position:
Alignm length: 810
Alignm identity: 457
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 51

Conread position: 4-832
Cow position:
Alignm length: 833
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 304

Conread position: 4-832
Cow position:
Alignm length: 839
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 40

Conread position: 4-832
Cow position:
Alignm length: 832
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 424, 437

Conread position: 4-832
Cow position:
Alignm length: 832
Alignm identity: 473
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 292, 300

Conread position: 4-834
Cow position:
Alignm length: 836
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 55

Conread position: 4-836
Cow position:
Alignm length: 843
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 4-836
Cow position:
Alignm length: 838
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 48

Conread position: 4-836
Cow position:
Alignm length: 841
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 201

Conread position: 4-837
Cow position:
Alignm length: 840
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 55

Conread position: 4-837
Cow position:
Alignm length: 839
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 305

Conread position: 4-837
Cow position:
Alignm length: 839
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 43

Conread position: 4-837
Cow position:
Alignm length: 844
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 47

Conread position: 5-547
Cow position:
Alignm length: 548
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 51

Conread position: 6-797
Cow position:
Alignm length: 793
Alignm identity: 498
Alignm E-value: 0
Alignm gaps (pig, cow): 452, 459

Conread position: 6-797
Cow position:
Alignm length: 797
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 38

Conread position: 7-467
Cow position:
Alignm length: 465
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 50

Conread position: 7-631
Cow position:
Alignm length: 635
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 42

Conread position: 10-380
Cow position:
Alignm length: 372
Alignm identity: 237
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 219, 226

Conread position: 14-705
Cow position:
Alignm length: 694
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 467, 474

Conread position: 15-832
Cow position:
Alignm length: 822
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 66

Conread position: 16-797
Cow position:
Alignm length: 794
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 24

Conread position: 18-510
Cow position:
Alignm length: 494
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 189

Conread position: 25-572
Cow position:
Alignm length: 551
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 34

Conread position: 44-832
Cow position:
Alignm length: 804
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 170

Conread position: 58-388
Cow position:
Alignm length: 337
Alignm identity: 214
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 74, 85

Conread position: 58-832
Cow position:
Alignm length: 776
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 262, 254

Conread position: 58-846
Cow position:
Alignm length: 794
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 77

Conread position: 59-802
Cow position:
Alignm length: 749
Alignm identity: 447
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 62, 83

Conread position: 67-622
Cow position:
Alignm length: 558
Alignm identity: 326
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 163, 147

Conread position: 71-717
Cow position:
Alignm length: 653
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 69

Conread position: 71-787
Cow position:
Alignm length: 741
Alignm identity: 462
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 149, 129

Conread position: 85-546
Cow position:
Alignm length: 465
Alignm identity: 274
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 130, 140

Conread position: 88-417
Cow position:
Alignm length: 332
Alignm identity: 211
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 186, 192

Conread position: 88-752
Cow position:
Alignm length: 667
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 48

Conread position: 101-442
Cow position:
Alignm length: 344
Alignm identity: 222
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 173, 179

Conread position: 102-594
Cow position:
Alignm length: 493
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-442
Cow position:
Alignm length: 342
Alignm identity: 208
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 39

Conread position: 103-838
Cow position:
Alignm length: 739
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 18

Conread position: 109-678
Cow position:
Alignm length: 575
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 98

Conread position: 124-630
Cow position:
Alignm length: 529
Alignm identity: 324
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 10, 400

Conread position: 138-799
Cow position:
Alignm length: 664
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 351, 337

Conread position: 139-458
Cow position:
Alignm length: 325
Alignm identity: 212
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 80

Conread position: 149-838
Cow position:
Alignm length: 694
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 22

Conread position: 151-857
Cow position:
Alignm length: 714
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 149

Conread position: 157-796
Cow position:
Alignm length: 641
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 584, 579

Conread position: 161-870
Cow position:
Alignm length: 710
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 681, 0

Conread position: 163-871
Cow position:
Alignm length: 713
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 89

Conread position: 166-797
Cow position:
Alignm length: 637
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 216

Conread position: 169-762
Cow position:
Alignm length: 598
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 105

Conread position: 172-452
Cow position:
Alignm length: 282
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 225, 231

Conread position: 172-510
Cow position:
Alignm length: 340
Alignm identity: 216
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 225, 231

Conread position: 174-620
Cow position:
Alignm length: 451
Alignm identity: 283
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 14, 38

Conread position: 178-618
Cow position:
Alignm length: 444
Alignm identity: 278
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 108, 130

Conread position: 186-685
Cow position:
Alignm length: 502
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 25

Conread position: 221-836
Cow position:
Alignm length: 618
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 79

Conread position: 226-857
Cow position:
Alignm length: 636
Alignm identity: 379
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 242, 253

Conread position: 227-851
Cow position:
Alignm length: 628
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 112

Conread position: 250-838
Cow position:
Alignm length: 590
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 295

Conread position: 252-837
Cow position:
Alignm length: 590
Alignm identity: 354
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 133, 49

Conread position: 256-572
Cow position:
Alignm length: 318
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 186, 192

Conread position: 256-602
Cow position:
Alignm length: 349
Alignm identity: 225
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 186, 192

Conread position: 256-619
Cow position:
Alignm length: 366
Alignm identity: 223
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 57

Conread position: 259-769
Cow position:
Alignm length: 512
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 442, 435

Conread position: 259-860
Cow position:
Alignm length: 613
Alignm identity: 375
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 145, 7

Conread position: 260-584
Cow position:
Alignm length: 328
Alignm identity: 224
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 124, 132

Conread position: 265-847
Cow position:
Alignm length: 587
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 154

Conread position: 308-643
Cow position:
Alignm length: 342
Alignm identity: 222
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 76, 93

Conread position: 337-838
Cow position:
Alignm length: 504
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 166

Conread position: 343-707
Cow position:
Alignm length: 369
Alignm identity: 226
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 133

Conread position: 354-836
Cow position:
Alignm length: 484
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 454, 460

Conread position: 363-846
Cow position:
Alignm length: 487
Alignm identity: 286
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 275, 257

Conread position: 392-736
Cow position:
Alignm length: 350
Alignm identity: 218
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 87

Conread position: 414-837
Cow position:
Alignm length: 426
Alignm identity: 263
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 97, 88

Conread position: 424-753
Cow position:
Alignm length: 331
Alignm identity: 210
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 225, 231

Conread position: 431-832
Cow position:
Alignm length: 403
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 210, 205

Conread position: 438-778
Cow position:
Alignm length: 342
Alignm identity: 212
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 211, 217

Conread position: 440-712
Cow position:
Alignm length: 276
Alignm identity: 178
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 33, 27

Conread position: 478-802
Cow position:
Alignm length: 329
Alignm identity: 212
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 74, 91

Conread position: 501-798
Cow position:
Alignm length: 298
Alignm identity: 196
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 508-837
Cow position:
Alignm length: 333
Alignm identity: 212
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 134, 126

Conread position: 514-832
Cow position:
Alignm length: 322
Alignm identity: 207
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 127, 120

Conread position: 560-871
Cow position:
Alignm length: 313
Alignm identity: 197
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 248, 254

Conread position: 581-830
Cow position:
Alignm length: 251
Alignm identity: 171
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 217, 226

Conread position: 675-856
Cow position:
Alignm length: 182
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 172, 0

Show alignments to all cow chromosomes.