Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039M03.5
        

               Conread position:
               1-629
               

               Cow position:
               
               

               Alignm length:
               631
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               389, 393
               

               Conread position:
               1-738
               

               Cow position:
               
               

               Alignm length:
               746
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 213
               

               Conread position:
               1-857
               

               Cow position:
               
               

               Alignm length:
               859
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               725, 123
               

               Conread position:
               2-797
               

               Cow position:
               
               

               Alignm length:
               807
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 56
               

               Conread position:
               4-390
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               246
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               232, 109
               

               Conread position:
               4-467
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 50
               

               Conread position:
               4-508
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               498, 0
               

               Conread position:
               4-545
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               4-620
               

               Cow position:
               
               

               Alignm length:
               621
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 214
               

               Conread position:
               4-713
               

               Cow position:
               
               

               Alignm length:
               715
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 112
               

               Conread position:
               4-713
               

               Cow position:
               
               

               Alignm length:
               713
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 208
               

               Conread position:
               4-727
               

               Cow position:
               
               

               Alignm length:
               733
               

               Alignm identity:
               462
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               4-733
               

               Cow position:
               
               

               Alignm length:
               734
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               4-763
               

               Cow position:
               
               

               Alignm length:
               767
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               4-795
               

               Cow position:
               
               

               Alignm length:
               805
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 41
               

               Conread position:
               4-796
               

               Cow position:
               
               

               Alignm length:
               803
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 46
               

               Conread position:
               4-797
               

               Cow position:
               
               

               Alignm length:
               805
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 222
               

               Conread position:
               4-799
               

               Cow position:
               
               

               Alignm length:
               805
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 160
               

               Conread position:
               4-801
               

               Cow position:
               
               

               Alignm length:
               807
               

               Alignm identity:
               508
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 137
               

               Conread position:
               4-801
               

               Cow position:
               
               

               Alignm length:
               809
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 46
               

               Conread position:
               4-802
               

               Cow position:
               
               

               Alignm length:
               807
               

               Alignm identity:
               526
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 146
               

               Conread position:
               4-802
               

               Cow position:
               
               

               Alignm length:
               809
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 156
               

               Conread position:
               4-832
               

               Cow position:
               
               

               Alignm length:
               833
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 55
               

               Conread position:
               4-838
               

               Cow position:
               
               

               Alignm length:
               844
               

               Alignm identity:
               585
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               4-838
               

               Cow position:
               
               

               Alignm length:
               839
               

               Alignm identity:
               573
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 55
               

               Conread position:
               4-838
               

               Cow position:
               
               

               Alignm length:
               842
               

               Alignm identity:
               594
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 55
               

               Conread position:
               4-838
               

               Cow position:
               
               

               Alignm length:
               841
               

               Alignm identity:
               566
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 47
               

               Conread position:
               4-838
               

               Cow position:
               
               

               Alignm length:
               843
               

               Alignm identity:
               559
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               4-857
               

               Cow position:
               
               

               Alignm length:
               861
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 133
               

               Conread position:
               4-870
               

               Cow position:
               
               

               Alignm length:
               878
               

               Alignm identity:
               568
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 160
               

               Conread position:
               5-797
               

               Cow position:
               
               

               Alignm length:
               801
               

               Alignm identity:
               536
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 54
               

               Conread position:
               5-797
               

               Cow position:
               
               

               Alignm length:
               798
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 127
               

               Conread position:
               6-544
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               342
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               59, 52
               

               Conread position:
               6-760
               

               Cow position:
               
               

               Alignm length:
               758
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 115
               

               Conread position:
               6-804
               

               Cow position:
               
               

               Alignm length:
               808
               

               Alignm identity:
               528
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               229, 208
               

               Conread position:
               6-805
               

               Cow position:
               
               

               Alignm length:
               807
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 123
               

               Conread position:
               7-832
               

               Cow position:
               
               

               Alignm length:
               828
               

               Alignm identity:
               547
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 301
               

               Conread position:
               7-856
               

               Cow position:
               
               

               Alignm length:
               860
               

               Alignm identity:
               574
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               9-803
               

               Cow position:
               
               

               Alignm length:
               806
               

               Alignm identity:
               537
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 141
               

               Conread position:
               49-838
               

               Cow position:
               
               

               Alignm length:
               799
               

               Alignm identity:
               546
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               51-830
               

               Cow position:
               
               

               Alignm length:
               786
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 8
               

               Conread position:
               55-798
               

               Cow position:
               
               

               Alignm length:
               750
               

               Alignm identity:
               438
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               6, 98
               

               Conread position:
               63-838
               

               Cow position:
               
               

               Alignm length:
               778
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 58
               

               Conread position:
               65-816
               

               Cow position:
               
               

               Alignm length:
               761
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 76
               

               Conread position:
               66-812
               

               Cow position:
               
               

               Alignm length:
               752
               

               Alignm identity:
               529
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 141
               

               Conread position:
               70-847
               

               Cow position:
               
               

               Alignm length:
               781
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               488, 492
               

               Conread position:
               74-352
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               77, 63
               

               Conread position:
               88-797
               

               Cow position:
               
               

               Alignm length:
               718
               

               Alignm identity:
               457
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 148
               

               Conread position:
               88-802
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 136
               

               Conread position:
               95-637
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 50
               

               Conread position:
               95-797
               

               Cow position:
               
               

               Alignm length:
               709
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               149-799
               

               Cow position:
               
               

               Alignm length:
               651
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               150-857
               

               Cow position:
               
               

               Alignm length:
               720
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 57
               

               Conread position:
               157-856
               

               Cow position:
               
               

               Alignm length:
               703
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 54
               

               Conread position:
               177-836
               

               Cow position:
               
               

               Alignm length:
               661
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               359, 385
               

               Conread position:
               240-857
               

               Cow position:
               
               

               Alignm length:
               622
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 74
               

               Conread position:
               241-857
               

               Cow position:
               
               

               Alignm length:
               618
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               401, 393
               

               Conread position:
               252-797
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 151
               

               Conread position:
               262-797
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               333
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               42, 58
               

               Conread position:
               264-857
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               348
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               139, 105
               

               Conread position:
               265-860
               

               Cow position:
               
               

               Alignm length:
               599
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 214
               

               Conread position:
               336-804
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               293
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               137, 142
               

               Conread position:
               341-832
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 105
               

               Conread position:
               345-797
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               297
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               425-836
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               257
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               139, 129
               

               Conread position:
               429-801
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               236
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               122, 135
               

               Conread position:
               509-838
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               231, 208
               
Show alignments to all cow chromosomes.