Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039M03.5 |
| Conread position: | 2-806 |
| Cow position: | chr8:55580818-55581624 (view UCSC Genome Browser custom track) |
| Alignm length: | 813 |
| Alignm identity: | 538 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 205 |
| Conread position: | 4-417 |
| Cow position: | chr8:6957996-6957586 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 219, 207 |
| Conread position: | 4-451 |
| Cow position: | chr8:48406706-48406259 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 401, 387 |
| Conread position: | 4-488 |
| Cow position: | chr8:45201522-45202006 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 44 |
| Conread position: | 4-504 |
| Cow position: | chr8:55581242-55581742 (view UCSC Genome Browser custom track) |
| Alignm length: | 504 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 132 |
| Conread position: | 4-548 |
| Cow position: | chr8:45201438-45201982 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 196 |
| Conread position: | 4-752 |
| Cow position: | chr8:55580990-55581738 (view UCSC Genome Browser custom track) |
| Alignm length: | 752 |
| Alignm identity: | 484 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 196 |
| Conread position: | 4-783 |
| Cow position: | chr8:48407546-48406767 (view UCSC Genome Browser custom track) |
| Alignm length: | 782 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 304 |
| Conread position: | 4-791 |
| Cow position: | chr8:55580906-55581693 (view UCSC Genome Browser custom track) |
| Alignm length: | 794 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 55 |
| Conread position: | 4-792 |
| Cow position: | chr8:45201186-45201974 (view UCSC Genome Browser custom track) |
| Alignm length: | 795 |
| Alignm identity: | 529 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 33 |
| Conread position: | 4-802 |
| Cow position: | chr8:48407126-48406328 (view UCSC Genome Browser custom track) |
| Alignm length: | 800 |
| Alignm identity: | 520 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 134 |
| Conread position: | 4-828 |
| Cow position: | chr8:46816129-46816953 (view UCSC Genome Browser custom track) |
| Alignm length: | 830 |
| Alignm identity: | 570 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 139 |
| Conread position: | 4-832 |
| Cow position: | chr8:46816381-46817209 (view UCSC Genome Browser custom track) |
| Alignm length: | 834 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 139 |
| Conread position: | 4-838 |
| Cow position: | chr8:45201102-45201936 (view UCSC Genome Browser custom track) |
| Alignm length: | 843 |
| Alignm identity: | 567 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 43 |
| Conread position: | 4-838 |
| Cow position: | chr8:46816213-46817047 (view UCSC Genome Browser custom track) |
| Alignm length: | 843 |
| Alignm identity: | 569 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 4-838 |
| Cow position: | chr8:48407210-48406376 (view UCSC Genome Browser custom track) |
| Alignm length: | 838 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 4-842 |
| Cow position: | chr8:46816465-46817303 (view UCSC Genome Browser custom track) |
| Alignm length: | 847 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 52 |
| Conread position: | 4-846 |
| Cow position: | chr8:48407378-48406536 (view UCSC Genome Browser custom track) |
| Alignm length: | 845 |
| Alignm identity: | 546 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 432, 436 |
| Conread position: | 4-849 |
| Cow position: | chr8:46816549-46817394 (view UCSC Genome Browser custom track) |
| Alignm length: | 852 |
| Alignm identity: | 566 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 55 |
| Conread position: | 4-855 |
| Cow position: | chr8:45201018-45201868 (view UCSC Genome Browser custom track) |
| Alignm length: | 857 |
| Alignm identity: | 559 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 52 |
| Conread position: | 4-856 |
| Cow position: | chr8:46816297-46817148 (view UCSC Genome Browser custom track) |
| Alignm length: | 858 |
| Alignm identity: | 564 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 201 |
| Conread position: | 4-861 |
| Cow position: | chr8:48407630-48406774 (view UCSC Genome Browser custom track) |
| Alignm length: | 859 |
| Alignm identity: | 552 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 90 |
| Conread position: | 5-856 |
| Cow position: | chr8:46816046-46816896 (view UCSC Genome Browser custom track) |
| Alignm length: | 860 |
| Alignm identity: | 576 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 46 |
| Conread position: | 6-838 |
| Cow position: | chr8:45200936-45201768 (view UCSC Genome Browser custom track) |
| Alignm length: | 840 |
| Alignm identity: | 557 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 135 |
| Conread position: | 7-828 |
| Cow position: | chr8:46815964-46816785 (view UCSC Genome Browser custom track) |
| Alignm length: | 827 |
| Alignm identity: | 539 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 30 |
| Conread position: | 13-857 |
| Cow position: | chr8:46815883-46816729 (view UCSC Genome Browser custom track) |
| Alignm length: | 852 |
| Alignm identity: | 565 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 44 |
| Conread position: | 14-856 |
| Cow position: | chr8:46815641-46816476 (view UCSC Genome Browser custom track) |
| Alignm length: | 852 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 80 |
| Conread position: | 25-450 |
| Cow position: | chr8:6958059-6957635 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 276 |
| Conread position: | 95-838 |
| Cow position: | chr8:55580745-55581488 (view UCSC Genome Browser custom track) |
| Alignm length: | 749 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 41 |
| Conread position: | 109-539 |
| Cow position: | chr8:6958059-6957630 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 276, 0 |
| Conread position: | 159-857 |
| Cow position: | chr8:55580893-55581590 (view UCSC Genome Browser custom track) |
| Alignm length: | 705 |
| Alignm identity: | 477 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 55 |
| Conread position: | 192-618 |
| Cow position: | chr8:6958060-6957635 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 360-786 |
| Cow position: | chr8:6958060-6957635 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 275 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 529-831 |
| Cow position: | chr8:6958059-6957758 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 207 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 577-836 |
| Cow position: | chr8:48407645-48407386 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 55 |
| Conread position: | 609-838 |
| Cow position: | chr8:6958063-6957834 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 191, 203 |
Show alignments to all cow chromosomes.