Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039M13.5 |
| Conread position: | 6-158 |
| Cow position: | chr18:52918248-52918096 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-162 |
| Cow position: | chr18:52897023-52896867 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 134 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 71, 79 |
| Conread position: | 161-344 |
| Cow position: | chr18:52916864-52916681 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 161-345 |
| Cow position: | chr18:52896027-52895843 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 146 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 342-446 |
| Cow position: | chr18:52916266-52916162 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 447-667 |
| Cow position: | chr18:52895387-52895167 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 447-667 |
| Cow position: | chr18:52915991-52915771 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 674-816 |
| Cow position: | chr18:52894994-52894853 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 674-816 |
| Cow position: | chr18:52915594-52915452 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 915-1114 |
| Cow position: | chr18:52915129-52914930 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 155 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 946-1116 |
| Cow position: | chr18:52893226-52893056 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1125-1364 |
| Cow position: | chr18:52914809-52914556 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 1179-1355 |
| Cow position: | chr18:52892865-52892689 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 150 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1340-1453 |
| Cow position: | chr18:52892298-52892187 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1340-1463 |
| Cow position: | chr18:52914309-52914187 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
Show alignments to all cow chromosomes.