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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8039N11.3
        

               
Conread position:
               
1-394
               

               
Cow position:
               
chr20:18324961-18324559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
41, 91
               

               
Conread position:
               
25-418
               

               
Cow position:
               
chr20:8992978-8992570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
188, 66
               

               
Conread position:
               
26-387
               

               
Cow position:
               
chr20:10840463-10840093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
29-310
               

               
Cow position:
               
chr20:2790660-2790377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
51, 220
               

               
Conread position:
               
77-388
               

               
Cow position:
               
chr20:28161067-28161389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
233, 33
               

               
Conread position:
               
77-388
               

               
Cow position:
               
chr20:35124790-35125117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 52
               

               
Conread position:
               
80-388
               

               
Cow position:
               
chr20:8215817-8216137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
56, 44
               

               
Conread position:
               
82-393
               

               
Cow position:
               
chr20:13679747-13679417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
45, 181
               

               
Conread position:
               
86-409
               

               
Cow position:
               
chr20:10855041-10854710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
53, 112
               

               
Conread position:
               
88-382
               

               
Cow position:
               
chr20:25850683-25850377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
125, 21
               

               
Conread position:
               
88-387
               

               
Cow position:
               
chr20:5535245-5535555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
224, 22
               

               
Conread position:
               
88-387
               

               
Cow position:
               
chr20:30684628-30684940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
114, 22
               

               
Conread position:
               
88-388
               

               
Cow position:
               
chr20:15097569-15097257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
88-388
               

               
Cow position:
               
chr20:15292318-15292625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
225, 22
               

               
Conread position:
               
88-388
               

               
Cow position:
               
chr20:16179510-16179196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
88-388
               

               
Cow position:
               
chr20:23799193-23799505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
88-388
               

               
Cow position:
               
chr20:28565288-28564973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 22
               

               
Conread position:
               
88-388
               

               
Cow position:
               
chr20:29948806-29949120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
68, 47
               

               
Conread position:
               
88-395
               

               
Cow position:
               
chr20:12438453-12438135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
89-388
               

               
Cow position:
               
chr20:13763213-13763525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
131, 21
               

               
Conread position:
               
90-383
               

               
Cow position:
               
chr20:21393903-21394210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
93-388
               

               
Cow position:
               
chr20:8003915-8003608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
100-393
               

               
Cow position:
               
chr20:19438248-19438549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
24, 117
               

               
Conread position:
               
102-372
               

               
Cow position:
               
chr20:21914648-21914932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
107, 41
               

               
Conread position:
               
117-390
               

               
Cow position:
               
chr20:25961431-25961719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
117-390
               

               
Cow position:
               
chr20:38351006-38351292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
123-388
               

               
Cow position:
               
chr20:42905553-42905824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
21, 94
               

               
Conread position:
               
131-379
               

               
Cow position:
               
chr20:3271051-3271310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
159-391
               

               
Cow position:
               
chr20:823137-823384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
361-732
               

               
Cow position:
               
chr20:35889156-35888783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
166, 16
               

               
Conread position:
               
368-723
               

               
Cow position:
               
chr20:16558697-16558328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
62, 337
               

               
Conread position:
               
380-723
               

               
Cow position:
               
chr20:22216948-22217296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
140, 36
               

               
Conread position:
               
385-671
               

               
Cow position:
               
chr20:30482605-30482315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
390-724
               

               
Cow position:
               
chr20:30836199-30836537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
135, 7
               

               
Conread position:
               
393-761
               

               
Cow position:
               
chr20:12334017-12334391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 99
               

               
Conread position:
               
394-666
               

               
Cow position:
               
chr20:26415525-26415246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
394-684
               

               
Cow position:
               
chr20:4756181-4755888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 35
               

               
Conread position:
               
394-713
               

               
Cow position:
               
chr20:3501935-3502260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
131, 35
               

               
Conread position:
               
394-722
               

               
Cow position:
               
chr20:40176894-40177219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
127, 44
               

               
Conread position:
               
394-825
               

               
Cow position:
               
chr20:18321153-18320712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 30
               

               
Conread position:
               
395-722
               

               
Cow position:
               
chr20:1990096-1989768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
395-752
               

               
Cow position:
               
chr20:5104792-5104434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 31
               

               
Conread position:
               
395-770
               

               
Cow position:
               
chr20:10468717-10469087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 34
               

               
Conread position:
               
396-732
               

               
Cow position:
               
chr20:28604858-28605187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
156, 26
               

               
Conread position:
               
396-770
               

               
Cow position:
               
chr20:10200009-10200366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
397-747
               

               
Cow position:
               
chr20:19313421-19313062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 25
               

               
Conread position:
               
398-637
               

               
Cow position:
               
chr20:32614780-32614543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
151, 23
               

               
Conread position:
               
399-527
               

               
Cow position:
               
chr20:12420992-12420868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
399-536
               

               
Cow position:
               
chr20:17582453-17582589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
399-542
               

               
Cow position:
               
chr20:9509283-9509141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
399-550
               

               
Cow position:
               
chr20:1191538-1191688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
399-551
               

               
Cow position:
               
chr20:7803565-7803414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
27, 94
               

               
Conread position:
               
399-604
               

               
Cow position:
               
chr20:35995287-35995079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
399-613
               

               
Cow position:
               
chr20:32583140-32582924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
121, 18
               

               
Conread position:
               
399-625
               

               
Cow position:
               
chr20:38935562-38935338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
126, 23
               

               
Conread position:
               
399-628
               

               
Cow position:
               
chr20:5939329-5939091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
125, 26
               

               
Conread position:
               
399-628
               

               
Cow position:
               
chr20:11516161-11515929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-633
               

               
Cow position:
               
chr20:33356069-33356309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 126
               

               
Conread position:
               
399-637
               

               
Cow position:
               
chr20:6017427-6017182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
399-637
               

               
Cow position:
               
chr20:15117691-15117937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
399-637
               

               
Cow position:
               
chr20:41308939-41309179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
399-659
               

               
Cow position:
               
chr20:9340439-9340697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
399-668
               

               
Cow position:
               
chr20:28464925-28465192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
28, 127
               

               
Conread position:
               
399-674
               

               
Cow position:
               
chr20:13267782-13267505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
399-676
               

               
Cow position:
               
chr20:7756981-7756703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
399-677
               

               
Cow position:
               
chr20:10062076-10061795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
40, 142
               

               
Conread position:
               
399-678
               

               
Cow position:
               
chr20:4801041-4801325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-678
               

               
Cow position:
               
chr20:7710561-7710282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
399-679
               

               
Cow position:
               
chr20:9707248-9706967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
399-679
               

               
Cow position:
               
chr20:38123524-38123819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
29, 175
               

               
Conread position:
               
399-680
               

               
Cow position:
               
chr20:646693-646977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
399-680
               

               
Cow position:
               
chr20:14719094-14718811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
399-680
               

               
Cow position:
               
chr20:19352121-19351834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
27, 137
               

               
Conread position:
               
399-680
               

               
Cow position:
               
chr20:40058401-40058688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-693
               

               
Cow position:
               
chr20:20778894-20778604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
224, 18
               

               
Conread position:
               
399-700
               

               
Cow position:
               
chr20:12839704-12840008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
399-702
               

               
Cow position:
               
chr20:39375834-39376128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 27
               

               
Conread position:
               
399-702
               

               
Cow position:
               
chr20:41371609-41371922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
106, 35
               

               
Conread position:
               
399-703
               

               
Cow position:
               
chr20:28725931-28726242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-711
               

               
Cow position:
               
chr20:5702394-5702711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 30
               

               
Conread position:
               
399-711
               

               
Cow position:
               
chr20:13817491-13817806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
27, 97
               

               
Conread position:
               
399-712
               

               
Cow position:
               
chr20:32846999-32847319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
399-715
               

               
Cow position:
               
chr20:14636921-14637235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
399-717
               

               
Cow position:
               
chr20:35113177-35113505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
399-720
               

               
Cow position:
               
chr20:23164232-23163904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
27, 281
               

               
Conread position:
               
399-723
               

               
Cow position:
               
chr20:8577894-8578222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
126, 23
               

               
Conread position:
               
399-723
               

               
Cow position:
               
chr20:39377493-39377179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
399-724
               

               
Cow position:
               
chr20:22445991-22445662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
399-724
               

               
Cow position:
               
chr20:28439723-28440062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-724
               

               
Cow position:
               
chr20:39700752-39701083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 23
               

               
Conread position:
               
399-729
               

               
Cow position:
               
chr20:9014702-9014365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:7399047-7398710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:8429397-8429733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 23
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:10497554-10497218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
122, 26
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:11453709-11453371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 32
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:11550012-11550349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 22
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:17903805-17904143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 38
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:21019212-21019548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
77, 15
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:23792250-23792593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:23803037-23803378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
126, 40
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:27877369-27877712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
124, 22
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:31746977-31746645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
125, 23
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:33170225-33169889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 24
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:35036381-35036040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:36780089-36779745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 49
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:39415401-39415728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
224, 23
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr20:40256633-40256954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
277, 15
               

               
Conread position:
               
399-734
               

               
Cow position:
               
chr20:4950774-4950431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-737
               

               
Cow position:
               
chr20:10913688-10913344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
399-737
               

               
Cow position:
               
chr20:12567441-12567098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-740
               

               
Cow position:
               
chr20:6549822-6549484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
150, 22
               

               
Conread position:
               
399-745
               

               
Cow position:
               
chr20:12442050-12441686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 78
               

               
Conread position:
               
399-746
               

               
Cow position:
               
chr20:746606-746947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
399-746
               

               
Cow position:
               
chr20:3599750-3599394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
33, 48
               

               
Conread position:
               
399-746
               

               
Cow position:
               
chr20:6501446-6501805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
399-753
               

               
Cow position:
               
chr20:13821942-13821574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
399-753
               

               
Cow position:
               
chr20:20983671-20984004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 23
               

               
Conread position:
               
399-753
               

               
Cow position:
               
chr20:40304202-40303862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
122, 29
               

               
Conread position:
               
399-757
               

               
Cow position:
               
chr20:23679507-23679136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 260
               

               
Conread position:
               
399-769
               

               
Cow position:
               
chr20:9473967-9473591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
399-769
               

               
Cow position:
               
chr20:9536783-9537160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 35
               

               
Conread position:
               
399-769
               

               
Cow position:
               
chr20:12996367-12995988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 263
               

               
Conread position:
               
399-769
               

               
Cow position:
               
chr20:27339709-27340084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 29
               

               
Conread position:
               
399-793
               

               
Cow position:
               
chr20:3781786-3781382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 34
               

               
Conread position:
               
399-793
               

               
Cow position:
               
chr20:17845594-17846002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
29, 91
               

               
Conread position:
               
399-793
               

               
Cow position:
               
chr20:30817182-30817579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 30
               

               
Conread position:
               
399-793
               

               
Cow position:
               
chr20:32087814-32088211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
14, 33
               

               
Conread position:
               
399-793
               

               
Cow position:
               
chr20:33363160-33363559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 23
               

               
Conread position:
               
399-793
               

               
Cow position:
               
chr20:34001743-34001348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
154, 39
               

               
Conread position:
               
399-796
               

               
Cow position:
               
chr20:9411231-9411628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
145, 39
               

               
Conread position:
               
399-799
               

               
Cow position:
               
chr20:13877063-13876655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
399-799
               

               
Cow position:
               
chr20:20353268-20352867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
399-799
               

               
Cow position:
               
chr20:35145653-35146068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
399-816
               

               
Cow position:
               
chr20:14756423-14756002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 30
               

               
Conread position:
               
400-609
               

               
Cow position:
               
chr20:6477384-6477577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
400-679
               

               
Cow position:
               
chr20:31252178-31252461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
120, 16
               

               
Conread position:
               
400-680
               

               
Cow position:
               
chr20:3659053-3658770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 246
               

               
Conread position:
               
400-723
               

               
Cow position:
               
chr20:18100066-18100393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
400-793
               

               
Cow position:
               
chr20:4621694-4621299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
401-732
               

               
Cow position:
               
chr20:7806914-7806574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 21
               

               
Conread position:
               
402-550
               

               
Cow position:
               
chr20:26683740-26683593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
402-634
               

               
Cow position:
               
chr20:2907227-2906996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
402-680
               

               
Cow position:
               
chr20:28759542-28759821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
125, 20
               

               
Conread position:
               
402-707
               

               
Cow position:
               
chr20:38488644-38488954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
402-711
               

               
Cow position:
               
chr20:5181554-5181863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
122, 19
               

               
Conread position:
               
402-711
               

               
Cow position:
               
chr20:12321282-12321588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
119, 35
               

               
Conread position:
               
402-722
               

               
Cow position:
               
chr20:15777507-15777177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
119, 19
               

               
Conread position:
               
402-724
               

               
Cow position:
               
chr20:34325918-34325587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
119, 15
               

               
Conread position:
               
402-731
               

               
Cow position:
               
chr20:2882742-2883092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
123, 36
               

               
Conread position:
               
402-732
               

               
Cow position:
               
chr20:6238998-6238654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
402-792
               

               
Cow position:
               
chr20:10538971-10539360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
402-807
               

               
Cow position:
               
chr20:19146516-19146931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 20
               

               
Conread position:
               
403-688
               

               
Cow position:
               
chr20:20732139-20732423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
118, 28
               

               
Conread position:
               
403-711
               

               
Cow position:
               
chr20:39137558-39137240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
118, 19
               

               
Conread position:
               
403-723
               

               
Cow position:
               
chr20:28246531-28246199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
117, 18
               

               
Conread position:
               
403-723
               

               
Cow position:
               
chr20:31784422-31784093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
117, 13
               

               
Conread position:
               
403-809
               

               
Cow position:
               
chr20:28324369-28324775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
119, 13
               

               
Conread position:
               
405-721
               

               
Cow position:
               
chr20:29370526-29370204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
120, 23
               

               
Conread position:
               
405-732
               

               
Cow position:
               
chr20:5958252-5957918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
120, 16
               

               
Conread position:
               
405-732
               

               
Cow position:
               
chr20:11614391-11614059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 17
               

               
Conread position:
               
405-732
               

               
Cow position:
               
chr20:14740436-14740112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
144, 35
               

               
Conread position:
               
405-734
               

               
Cow position:
               
chr20:8970016-8969683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
115, 16
               

               
Conread position:
               
405-747
               

               
Cow position:
               
chr20:31927806-31927456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 24
               

               
Conread position:
               
405-774
               

               
Cow position:
               
chr20:33176852-33177216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
235, 17
               

               
Conread position:
               
406-723
               

               
Cow position:
               
chr20:22060284-22059957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
406-746
               

               
Cow position:
               
chr20:7132012-7132354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
119, 15
               

               
Conread position:
               
408-732
               

               
Cow position:
               
chr20:17734117-17733791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 29
               

               
Conread position:
               
415-525
               

               
Cow position:
               
chr20:16941760-16941651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
415-863
               

               
Cow position:
               
chr20:31261390-31261829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
24, 201
               

               
Conread position:
               
416-798
               

               
Cow position:
               
chr20:4578947-4578554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
21, 324
               

               
Conread position:
               
417-550
               

               
Cow position:
               
chr20:15079001-15078863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-551
               

               
Cow position:
               
chr20:39515599-39515460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-555
               

               
Cow position:
               
chr20:32191374-32191231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-565
               

               
Cow position:
               
chr20:18162685-18162842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-565
               

               
Cow position:
               
chr20:33303829-33303672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-565
               

               
Cow position:
               
chr20:41975707-41975864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-624
               

               
Cow position:
               
chr20:10100022-10100238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-632
               

               
Cow position:
               
chr20:9082498-9082274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-632
               

               
Cow position:
               
chr20:35169941-35170165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-633
               

               
Cow position:
               
chr20:24567373-24567151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 193
               

               
Conread position:
               
417-648
               

               
Cow position:
               
chr20:37439288-37439527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 233
               

               
Conread position:
               
417-663
               

               
Cow position:
               
chr20:31854918-31854670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
103, 165
               

               
Conread position:
               
417-672
               

               
Cow position:
               
chr20:19441816-19442084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:826684-826959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:4746304-4746029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:9279595-9279320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:10790966-10791241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:11330512-11330236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:11887814-11887538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:12176591-12176315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:13303400-13303125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:13618895-13618621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:15009389-15009664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:17909304-17909027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:18091715-18091440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
20, 168
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:18440532-18440263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:20438136-20437859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:22274210-22273935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:26052454-26052180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:26597732-26598007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:28443453-28443186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
23, 133
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:29784373-29784647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:30384347-30384073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:33810768-33811043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
29, 157
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:33994356-33994081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:35073280-35073555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:36310604-36310329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:38956179-38955904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr20:40119729-40119454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-686
               

               
Cow position:
               
chr20:12434513-12434227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
97, 160
               

               
Conread position:
               
417-708
               

               
Cow position:
               
chr20:8870426-8870122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 290
               

               
Conread position:
               
417-711
               

               
Cow position:
               
chr20:13505683-13505375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 215
               

               
Conread position:
               
417-719
               

               
Cow position:
               
chr20:33540536-33540855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 219
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:326421-326739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:754340-754660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:1024354-1024033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:3378209-3378526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:3745281-3745602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:5097575-5097254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:5502842-5502521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:6135106-6134785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:7641819-7642140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:8247091-8246772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:8446311-8446632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 155
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:8708105-8707784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:9994180-9994501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:10146365-10146687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 220
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:11350592-11350913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:13114774-13114454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 96
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:14436454-14436776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 167
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:16189186-16188865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:21952882-21953203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:24388581-24388902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:24543501-24543821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 70
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:26737551-26737230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:29308136-29307815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:29979688-29980009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:31505232-31505552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 60
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:33021574-33021895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:33514520-33514841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:36424380-36424701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:38350908-38350587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr20:39269841-39269520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-724
               

               
Cow position:
               
chr20:37154068-37153746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
20, 219
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr20:774572-774241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 323
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr20:11010538-11010207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
17, 323
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr20:14837084-14837416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 324
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr20:21720435-21720766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
25, 157
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr20:29284710-29284379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr20:30480008-30480339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
20, 323
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr20:35094421-35094748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 319
               

               
Conread position:
               
417-742
               

               
Cow position:
               
chr20:18651507-18651846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 323
               

               
Conread position:
               
417-765
               

               
Cow position:
               
chr20:2433077-2433443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
417-769
               

               
Cow position:
               
chr20:34458375-34458010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 323
               

               
Conread position:
               
417-809
               

               
Cow position:
               
chr20:1761692-1762096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
20, 323
               

               
Conread position:
               
417-809
               

               
Cow position:
               
chr20:17864023-17864427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 323
               

               
Conread position:
               
417-809
               

               
Cow position:
               
chr20:20764812-20765216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 292
               

               
Conread position:
               
418-734
               

               
Cow position:
               
chr20:35640696-35641024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
102, 320
               

               
Conread position:
               
421-679
               

               
Cow position:
               
chr20:15937370-15937640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 79
               

               
Conread position:
               
421-679
               

               
Cow position:
               
chr20:22896989-22897256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
421-679
               

               
Cow position:
               
chr20:30736736-30736465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
421-679
               

               
Cow position:
               
chr20:36854644-36854915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
422-536
               

               
Cow position:
               
chr20:13023892-13023777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
422-550
               

               
Cow position:
               
chr20:6889945-6890075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 20
               

               
Conread position:
               
422-687
               

               
Cow position:
               
chr20:15577226-15576951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
99, 197
               

               
Conread position:
               
422-731
               

               
Cow position:
               
chr20:31740547-31740239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
127, 157
               

               
Conread position:
               
422-790
               

               
Cow position:
               
chr20:9412161-9412526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 215
               

               
Conread position:
               
422-791
               

               
Cow position:
               
chr20:15068813-15069179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
127, 97
               

               
Conread position:
               
423-723
               

               
Cow position:
               
chr20:3936053-3936364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
97, 13
               

               
Conread position:
               
423-723
               

               
Cow position:
               
chr20:26349237-26349549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
97, 10
               

               
Conread position:
               
423-748
               

               
Cow position:
               
chr20:27314339-27314678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
7, 169
               

               
Conread position:
               
424-631
               

               
Cow position:
               
chr20:18609399-18609605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 23
               

               
Conread position:
               
424-633
               

               
Cow position:
               
chr20:13063770-13063983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
424-679
               

               
Cow position:
               
chr20:25122329-25122063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
424-724
               

               
Cow position:
               
chr20:19845669-19845989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
424-724
               

               
Cow position:
               
chr20:21959388-21959075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
101, 148
               

               
Conread position:
               
424-732
               

               
Cow position:
               
chr20:19653635-19653316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
97, 179
               

               
Conread position:
               
424-757
               

               
Cow position:
               
chr20:7549925-7550250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
257, 134
               

               
Conread position:
               
424-793
               

               
Cow position:
               
chr20:22313493-22313119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 185
               

               
Conread position:
               
425-732
               

               
Cow position:
               
chr20:5539057-5539374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
425-771
               

               
Cow position:
               
chr20:14831953-14831590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
426-547
               

               
Cow position:
               
chr20:31880469-31880593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
426-678
               

               
Cow position:
               
chr20:24363313-24363571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
426-716
               

               
Cow position:
               
chr20:4781221-4781533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
426-722
               

               
Cow position:
               
chr20:17831515-17831820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
98, 154
               

               
Conread position:
               
426-747
               

               
Cow position:
               
chr20:18185248-18185568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 214
               

               
Conread position:
               
427-530
               

               
Cow position:
               
chr20:21398711-21398814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
427-550
               

               
Cow position:
               
chr20:11482608-11482482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
427-550
               

               
Cow position:
               
chr20:33568619-33568744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
427-565
               

               
Cow position:
               
chr20:14926316-14926461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
427-605
               

               
Cow position:
               
chr20:28440940-28441119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 105
               

               
Conread position:
               
427-610
               

               
Cow position:
               
chr20:9267451-9267262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
427-621
               

               
Cow position:
               
chr20:19340399-19340197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
427-622
               

               
Cow position:
               
chr20:34900495-34900692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
427-632
               

               
Cow position:
               
chr20:27000076-27000278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
94, 149
               

               
Conread position:
               
427-633
               

               
Cow position:
               
chr20:34095522-34095735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
427-637
               

               
Cow position:
               
chr20:15437635-15437852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
427-637
               

               
Cow position:
               
chr20:29990806-29990591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
427-662
               

               
Cow position:
               
chr20:15821992-15822228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 57
               

               
Conread position:
               
427-663
               

               
Cow position:
               
chr20:26316143-26315902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
94, 45
               

               
Conread position:
               
427-674
               

               
Cow position:
               
chr20:32866676-32866418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
427-675
               

               
Cow position:
               
chr20:10689452-10689703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
175, 93
               

               
Conread position:
               
427-678
               

               
Cow position:
               
chr20:3891720-3891969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
119, 101
               

               
Conread position:
               
427-679
               

               
Cow position:
               
chr20:11171559-11171821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
427-679
               

               
Cow position:
               
chr20:27565691-27565952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr20:868882-868624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr20:5077867-5078118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
96, 82
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr20:12155433-12155175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
66, 218
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr20:13766793-13767057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr20:32667660-32667924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
93, 157
               

               
Conread position:
               
427-682
               

               
Cow position:
               
chr20:30396056-30395795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
94, 9
               

               
Conread position:
               
427-685
               

               
Cow position:
               
chr20:38028323-38028068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
109, 121
               

               
Conread position:
               
427-687
               

               
Cow position:
               
chr20:4895225-4894952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
94, 234
               

               
Conread position:
               
427-687
               

               
Cow position:
               
chr20:13789980-13790246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
98, 19
               

               
Conread position:
               
427-692
               

               
Cow position:
               
chr20:28282988-28283267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
427-693
               

               
Cow position:
               
chr20:19459971-19459717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
112, 19
               

               
Conread position:
               
427-702
               

               
Cow position:
               
chr20:34836194-34835914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
144, 158
               

               
Conread position:
               
427-705
               

               
Cow position:
               
chr20:22920489-22920207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
95, 20
               

               
Conread position:
               
427-708
               

               
Cow position:
               
chr20:39875621-39875332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
97, 203
               

               
Conread position:
               
427-711
               

               
Cow position:
               
chr20:31221154-31221450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
96, 234
               

               
Conread position:
               
427-711
               

               
Cow position:
               
chr20:35922200-35921904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
98, 20
               

               
Conread position:
               
427-719
               

               
Cow position:
               
chr20:23849962-23850256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
126, 64
               

               
Conread position:
               
427-721
               

               
Cow position:
               
chr20:26076758-26077053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 134
               

               
Conread position:
               
427-722
               

               
Cow position:
               
chr20:10235522-10235829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
427-723
               

               
Cow position:
               
chr20:7596675-7596365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
98, 156
               

               
Conread position:
               
427-723
               

               
Cow position:
               
chr20:10818554-10818253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
427-723
               

               
Cow position:
               
chr20:11176577-11176272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
94, 274
               

               
Conread position:
               
427-723
               

               
Cow position:
               
chr20:18490863-18491160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 108
               

               
Conread position:
               
427-723
               

               
Cow position:
               
chr20:18530116-18530415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
101, 271
               

               
Conread position:
               
427-723
               

               
Cow position:
               
chr20:35970614-35970920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
427-724
               

               
Cow position:
               
chr20:8763557-8763864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
98, 116
               

               
Conread position:
               
427-724
               

               
Cow position:
               
chr20:13326006-13326308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
427-724
               

               
Cow position:
               
chr20:23833807-23834106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
196, 57
               

               
Conread position:
               
427-724
               

               
Cow position:
               
chr20:25844397-25844088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
427-724
               

               
Cow position:
               
chr20:39543544-39543849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
18, 222
               

               
Conread position:
               
427-726
               

               
Cow position:
               
chr20:25658119-25657836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
97, 164
               

               
Conread position:
               
427-726
               

               
Cow position:
               
chr20:39742986-39743296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
86, 25
               

               
Conread position:
               
427-726
               

               
Cow position:
               
chr20:40423420-40423112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
427-727
               

               
Cow position:
               
chr20:18169051-18169363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
427-728
               

               
Cow position:
               
chr20:10859695-10859381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr20:6571002-6571311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
94, 215
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr20:7646091-7645775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr20:10919645-10919329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr20:14210491-14210171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr20:15295932-15296244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
98, 219
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr20:18222908-18222592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
98, 202
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr20:25296914-25296611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
151, 141
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr20:30689782-30690094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
100, 166
               

               
Conread position:
               
427-733
               

               
Cow position:
               
chr20:41977093-41977399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
93, 38
               

               
Conread position:
               
427-742
               

               
Cow position:
               
chr20:12048078-12048390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
98, 155
               

               
Conread position:
               
427-747
               

               
Cow position:
               
chr20:13269297-13269623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 53
               

               
Conread position:
               
427-748
               

               
Cow position:
               
chr20:4945575-4945246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 31
               

               
Conread position:
               
427-748
               

               
Cow position:
               
chr20:33531980-33532308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 193
               

               
Conread position:
               
427-753
               

               
Cow position:
               
chr20:7110448-7110113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
94, 272
               

               
Conread position:
               
427-753
               

               
Cow position:
               
chr20:19750982-19751315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 72
               

               
Conread position:
               
427-756
               

               
Cow position:
               
chr20:21324784-21325126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
96, 226
               

               
Conread position:
               
427-757
               

               
Cow position:
               
chr20:6096814-6096482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 15
               

               
Conread position:
               
427-757
               

               
Cow position:
               
chr20:23065167-23064819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
427-757
               

               
Cow position:
               
chr20:23871145-23870809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
95, 144
               

               
Conread position:
               
427-762
               

               
Cow position:
               
chr20:6423638-6423990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 36
               

               
Conread position:
               
427-762
               

               
Cow position:
               
chr20:16715074-16715412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
427-762
               

               
Cow position:
               
chr20:22959673-22959327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 71
               

               
Conread position:
               
427-764
               

               
Cow position:
               
chr20:581257-580906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
98, 26
               

               
Conread position:
               
427-774
               

               
Cow position:
               
chr20:6258392-6258035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 20
               

               
Conread position:
               
427-781
               

               
Cow position:
               
chr20:26825952-26825600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
151, 96
               

               
Conread position:
               
427-791
               

               
Cow position:
               
chr20:14806555-14806926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 87
               

               
Conread position:
               
427-791
               

               
Cow position:
               
chr20:19363691-19363323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 38
               

               
Conread position:
               
427-791
               

               
Cow position:
               
chr20:28982372-28982741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
122, 89
               

               
Conread position:
               
427-793
               

               
Cow position:
               
chr20:9433275-9433628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
91, 35
               

               
Conread position:
               
427-793
               

               
Cow position:
               
chr20:20967027-20967362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 110
               

               
Conread position:
               
427-793
               

               
Cow position:
               
chr20:38817686-38818048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 104
               

               
Conread position:
               
427-798
               

               
Cow position:
               
chr20:17889418-17889036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
98, 316
               

               
Conread position:
               
427-798
               

               
Cow position:
               
chr20:36704512-36704891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
427-800
               

               
Cow position:
               
chr20:20202886-20203268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 343
               

               
Conread position:
               
427-800
               

               
Cow position:
               
chr20:31845911-31845510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
97, 153
               

               
Conread position:
               
428-680
               

               
Cow position:
               
chr20:25352518-25352262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
96, 65
               

               
Conread position:
               
428-680
               

               
Cow position:
               
chr20:32548639-32548891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
96, 211
               

               
Conread position:
               
428-681
               

               
Cow position:
               
chr20:22651175-22651437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
97, 31
               

               
Conread position:
               
428-769
               

               
Cow position:
               
chr20:24391672-24392000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
196, 20
               

               
Conread position:
               
429-543
               

               
Cow position:
               
chr20:34899831-34899948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
429-550
               

               
Cow position:
               
chr20:28500180-28500056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
429-550
               

               
Cow position:
               
chr20:38487042-38486918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
429-637
               

               
Cow position:
               
chr20:9419308-9419093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
429-664
               

               
Cow position:
               
chr20:13710919-13710685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
156, 51
               

               
Conread position:
               
429-679
               

               
Cow position:
               
chr20:11142772-11142511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
429-679
               

               
Cow position:
               
chr20:37190190-37190447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
99, 57
               

               
Conread position:
               
429-681
               

               
Cow position:
               
chr20:32583803-32584062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 17
               

               
Conread position:
               
429-723
               

               
Cow position:
               
chr20:23355146-23354839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
91, 275
               

               
Conread position:
               
429-723
               

               
Cow position:
               
chr20:30908872-30909179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
429-723
               

               
Cow position:
               
chr20:36052070-36052366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
93, 217
               

               
Conread position:
               
429-732
               

               
Cow position:
               
chr20:8112486-8112801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
92, 253
               

               
Conread position:
               
429-732
               

               
Cow position:
               
chr20:8482531-8482222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
96, 32
               

               
Conread position:
               
429-732
               

               
Cow position:
               
chr20:27641808-27642124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
96, 143
               

               
Conread position:
               
429-734
               

               
Cow position:
               
chr20:20565939-20566243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
92, 152
               

               
Conread position:
               
429-753
               

               
Cow position:
               
chr20:32636903-32636562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
50, 13
               

               
Conread position:
               
429-795
               

               
Cow position:
               
chr20:24069487-24069850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 132
               

               
Conread position:
               
430-723
               

               
Cow position:
               
chr20:37435500-37435806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
430-732
               

               
Cow position:
               
chr20:11765932-11765624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
91, 159
               

               
Conread position:
               
430-738
               

               
Cow position:
               
chr20:24398958-24398645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
91, 29
               

               
Conread position:
               
430-785
               

               
Cow position:
               
chr20:19410692-19410328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 243
               

               
Conread position:
               
431-732
               

               
Cow position:
               
chr20:40781651-40781951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
161, 100
               

               
Conread position:
               
432-732
               

               
Cow position:
               
chr20:30943501-30943193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
432-756
               

               
Cow position:
               
chr20:14615302-14614987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
251, 99
               

               
Conread position:
               
433-681
               

               
Cow position:
               
chr20:23681596-23681346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
141, 97
               

               
Conread position:
               
433-732
               

               
Cow position:
               
chr20:37106870-37106577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 123
               

               
Conread position:
               
434-719
               

               
Cow position:
               
chr20:13501613-13501899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
99, 213
               

               
Conread position:
               
435-633
               

               
Cow position:
               
chr20:36399140-36398939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
90, 133
               

               
Conread position:
               
435-656
               

               
Cow position:
               
chr20:14287232-14287005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
90, 137
               

               
Conread position:
               
435-722
               

               
Cow position:
               
chr20:20485600-20485300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
435-732
               

               
Cow position:
               
chr20:9126415-9126720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
435-732
               

               
Cow position:
               
chr20:9588292-9588596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
92, 211
               

               
Conread position:
               
435-732
               

               
Cow position:
               
chr20:19328081-19328385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 7
               

               
Conread position:
               
435-736
               

               
Cow position:
               
chr20:38001397-38001704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 210
               

               
Conread position:
               
436-632
               

               
Cow position:
               
chr20:13450733-13450530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
436-637
               

               
Cow position:
               
chr20:27510033-27510241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
436-676
               

               
Cow position:
               
chr20:31069321-31069560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 144
               

               
Conread position:
               
436-679
               

               
Cow position:
               
chr20:17806910-17806656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
436-679
               

               
Cow position:
               
chr20:28100382-28100636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
436-723
               

               
Cow position:
               
chr20:4902124-4902424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
436-723
               

               
Cow position:
               
chr20:16628381-16628681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 268
               

               
Conread position:
               
436-723
               

               
Cow position:
               
chr20:20693146-20692846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
436-757
               

               
Cow position:
               
chr20:34597436-34597089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
438-680
               

               
Cow position:
               
chr20:9659838-9660080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
87, 114
               

               
Conread position:
               
438-723
               

               
Cow position:
               
chr20:9108171-9108470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
82, 197
               

               
Conread position:
               
439-637
               

               
Cow position:
               
chr20:20700658-20700453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
439-724
               

               
Cow position:
               
chr20:1580965-1581262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
86, 132
               

               
Conread position:
               
439-732
               

               
Cow position:
               
chr20:33144871-33144569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
439-758
               

               
Cow position:
               
chr20:19236773-19237090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
82, 66
               

               
Conread position:
               
439-762
               

               
Cow position:
               
chr20:6054821-6054499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
439-769
               

               
Cow position:
               
chr20:17251393-17251739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 173
               

               
Conread position:
               
439-799
               

               
Cow position:
               
chr20:33435480-33435117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 210
               

               
Conread position:
               
441-679
               

               
Cow position:
               
chr20:32452049-32452298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
441-793
               

               
Cow position:
               
chr20:24002013-24002357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
102, 120
               

               
Conread position:
               
442-732
               

               
Cow position:
               
chr20:29844730-29845033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
83, 212
               

               
Conread position:
               
442-732
               

               
Cow position:
               
chr20:35064261-35063966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
83, 177
               

               
Conread position:
               
443-539
               

               
Cow position:
               
chr20:16875791-16875695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
443-732
               

               
Cow position:
               
chr20:17657315-17657011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
443-770
               

               
Cow position:
               
chr20:18399447-18399787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 132
               

               
Conread position:
               
444-792
               

               
Cow position:
               
chr20:21345089-21345469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 343
               

               
Conread position:
               
445-734
               

               
Cow position:
               
chr20:16407363-16407663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
75, 125
               

               
Conread position:
               
446-706
               

               
Cow position:
               
chr20:39213584-39213314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
103, 85
               

               
Conread position:
               
451-721
               

               
Cow position:
               
chr20:42278401-42278682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
13, 121
               

               
Conread position:
               
452-681
               

               
Cow position:
               
chr20:37224533-37224300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
97, 78
               

               
Conread position:
               
453-680
               

               
Cow position:
               
chr20:8101351-8101113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 119
               

               
Conread position:
               
453-683
               

               
Cow position:
               
chr20:3034793-3035031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 126
               

               
Conread position:
               
453-723
               

               
Cow position:
               
chr20:30828291-30828007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
67, 255
               

               
Conread position:
               
453-793
               

               
Cow position:
               
chr20:35797303-35797653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 19
               

               
Conread position:
               
454-732
               

               
Cow position:
               
chr20:39398177-39398469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
71, 176
               

               
Conread position:
               
454-762
               

               
Cow position:
               
chr20:5998977-5998655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
41, 202
               

               
Conread position:
               
455-624
               

               
Cow position:
               
chr20:37255584-37255408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
456-681
               

               
Cow position:
               
chr20:12064329-12064562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 28
               

               
Conread position:
               
456-753
               

               
Cow position:
               
chr20:13751945-13752241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 110
               

               
Conread position:
               
459-629
               

               
Cow position:
               
chr20:38670141-38670315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 112
               

               
Conread position:
               
459-678
               

               
Cow position:
               
chr20:16515041-16514815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 113
               

               
Conread position:
               
459-679
               

               
Cow position:
               
chr20:38793837-38793606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
459-791
               

               
Cow position:
               
chr20:6240827-6240481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 310
               

               
Conread position:
               
465-679
               

               
Cow position:
               
chr20:20469351-20469576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
465-686
               

               
Cow position:
               
chr20:6869406-6869625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
59, 140
               

               
Conread position:
               
465-720
               

               
Cow position:
               
chr20:8082975-8083244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
55, 240
               

               
Conread position:
               
465-732
               

               
Cow position:
               
chr20:23952333-23952606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
158, 103
               

               
Conread position:
               
465-742
               

               
Cow position:
               
chr20:16291187-16291468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
57, 73
               

               
Conread position:
               
465-793
               

               
Cow position:
               
chr20:38579028-38578719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
223, 67
               

               
Conread position:
               
466-753
               

               
Cow position:
               
chr20:15761238-15760940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 247
               

               
Conread position:
               
467-723
               

               
Cow position:
               
chr20:7426479-7426214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 20
               

               
Conread position:
               
467-724
               

               
Cow position:
               
chr20:3405789-3406054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
53, 115
               

               
Conread position:
               
467-727
               

               
Cow position:
               
chr20:39418180-39417920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
64, 25
               

               
Conread position:
               
467-753
               

               
Cow position:
               
chr20:39728161-39728456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 67
               

               
Conread position:
               
469-645
               

               
Cow position:
               
chr20:8096599-8096784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
33, 122
               

               
Conread position:
               
469-772
               

               
Cow position:
               
chr20:34202359-34202675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
52, 179
               

               
Conread position:
               
471-733
               

               
Cow position:
               
chr20:10884652-10884373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
471-795
               

               
Cow position:
               
chr20:25009926-25009588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 226
               

               
Conread position:
               
474-680
               

               
Cow position:
               
chr20:31147813-31148017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
49, 143
               

               
Conread position:
               
474-776
               

               
Cow position:
               
chr20:42469484-42469789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
61, 115
               

               
Conread position:
               
474-791
               

               
Cow position:
               
chr20:12582231-12581915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
14, 156
               

               
Conread position:
               
481-723
               

               
Cow position:
               
chr20:36336738-36336484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
482-805
               

               
Cow position:
               
chr20:21714477-21714808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
53, 148
               

               
Conread position:
               
484-664
               

               
Cow position:
               
chr20:26058341-26058152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
484-676
               

               
Cow position:
               
chr20:20201719-20201912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
43, 117
               

               
Conread position:
               
487-711
               

               
Cow position:
               
chr20:20196875-20197101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
34, 133
               

               
Conread position:
               
487-729
               

               
Cow position:
               
chr20:22008761-22008514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
487-793
               

               
Cow position:
               
chr20:35958379-35958689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
35, 273
               

               
Conread position:
               
487-799
               

               
Cow position:
               
chr20:10178380-10178051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 291
               

               
Conread position:
               
488-732
               

               
Cow position:
               
chr20:31464647-31464393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
492-776
               

               
Cow position:
               
chr20:8703174-8702886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
494-793
               

               
Cow position:
               
chr20:13967522-13967215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 153
               

               
Conread position:
               
495-711
               

               
Cow position:
               
chr20:24521489-24521714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
497-635
               

               
Cow position:
               
chr20:5950889-5950748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
498-732
               

               
Cow position:
               
chr20:15582294-15582054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
27, 184
               

               
Conread position:
               
507-719
               

               
Cow position:
               
chr20:22235062-22235285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
510-730
               

               
Cow position:
               
chr20:8910679-8910905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
510-793
               

               
Cow position:
               
chr20:15549142-15548855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
19, 117
               

               
Conread position:
               
514-726
               

               
Cow position:
               
chr20:1640687-1640465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
40, 59
               

               
Conread position:
               
517-757
               

               
Cow position:
               
chr20:40127573-40127324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
36, 135
               

               
Conread position:
               
519-732
               

               
Cow position:
               
chr20:39517778-39517990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
520-753
               

               
Cow position:
               
chr20:20312971-20312739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
29, 102
               

               
Conread position:
               
521-800
               

               
Cow position:
               
chr20:3331527-3331237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
32, 233
               

               
Conread position:
               
522-805
               

               
Cow position:
               
chr20:11341037-11340743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
27, 243
               

               
Conread position:
               
528-679
               

               
Cow position:
               
chr20:12783971-12784126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
533-757
               

               
Cow position:
               
chr20:6890484-6890726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 197
               

               
Conread position:
               
534-793
               

               
Cow position:
               
chr20:34098176-34097915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 200
               

               
Conread position:
               
535-768
               

               
Cow position:
               
chr20:26996315-26996556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
535-793
               

               
Cow position:
               
chr20:35009959-35009696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
536-748
               

               
Cow position:
               
chr20:14759882-14759658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
21, 126
               

               
Conread position:
               
536-773
               

               
Cow position:
               
chr20:40185891-40185656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
536-793
               

               
Cow position:
               
chr20:35364834-35365087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
541-793
               

               
Cow position:
               
chr20:23936628-23936363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
38, 228
               

               
Conread position:
               
541-793
               

               
Cow position:
               
chr20:29805870-29805617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
542-810
               

               
Cow position:
               
chr20:8556482-8556210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
81, 215
               

               
Conread position:
               
544-804
               

               
Cow position:
               
chr20:15074038-15073774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
150, 141
               

               
Conread position:
               
547-732
               

               
Cow position:
               
chr20:22007301-22007484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
132, 83
               

               
Conread position:
               
548-693
               

               
Cow position:
               
chr20:22029736-22029887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
548-704
               

               
Cow position:
               
chr20:13023680-13023519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
548-709
               

               
Cow position:
               
chr20:5116506-5116341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
548-723
               

               
Cow position:
               
chr20:29754584-29754760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
77, 91
               

               
Conread position:
               
548-724
               

               
Cow position:
               
chr20:36331630-36331449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
548-726
               

               
Cow position:
               
chr20:1139975-1139801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 89
               

               
Conread position:
               
548-729
               

               
Cow position:
               
chr20:41452008-41451825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
548-732
               

               
Cow position:
               
chr20:11741505-11741317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
548-732
               

               
Cow position:
               
chr20:34776984-34777163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
548-738
               

               
Cow position:
               
chr20:38486750-38486559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 114
               

               
Conread position:
               
548-746
               

               
Cow position:
               
chr20:7442326-7442127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
548-746
               

               
Cow position:
               
chr20:15235562-15235769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
27, 9
               

               
Conread position:
               
548-752
               

               
Cow position:
               
chr20:25686553-25686345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
548-753
               

               
Cow position:
               
chr20:9379207-9379417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
548-753
               

               
Cow position:
               
chr20:14572558-14572356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
142, 105
               

               
Conread position:
               
548-753
               

               
Cow position:
               
chr20:15566033-15565818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 27
               

               
Conread position:
               
548-753
               

               
Cow position:
               
chr20:38551172-38551381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
64, 76
               

               
Conread position:
               
548-757
               

               
Cow position:
               
chr20:35897316-35897530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
548-758
               

               
Cow position:
               
chr20:11482341-11482122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
548-762
               

               
Cow position:
               
chr20:11923442-11923226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
20, 83
               

               
Conread position:
               
548-765
               

               
Cow position:
               
chr20:4205761-4205987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
548-769
               

               
Cow position:
               
chr20:38768655-38768434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
149, 85
               

               
Conread position:
               
548-792
               

               
Cow position:
               
chr20:5826735-5826984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
86, 219
               

               
Conread position:
               
548-793
               

               
Cow position:
               
chr20:6602835-6603084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
548-793
               

               
Cow position:
               
chr20:6848420-6848672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
548-793
               

               
Cow position:
               
chr20:15593094-15593339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
548-793
               

               
Cow position:
               
chr20:39019494-39019737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
140, 16
               

               
Conread position:
               
548-798
               

               
Cow position:
               
chr20:18618437-18618689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
186, 16
               

               
Conread position:
               
548-800
               

               
Cow position:
               
chr20:34251880-34251625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
129, 70
               

               
Conread position:
               
548-800
               

               
Cow position:
               
chr20:39325183-39325439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
85, 155
               

               
Conread position:
               
548-801
               

               
Cow position:
               
chr20:23505627-23505879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
75, 16
               

               
Conread position:
               
549-724
               

               
Cow position:
               
chr20:8607121-8606942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
549-789
               

               
Cow position:
               
chr20:10208603-10208846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
551-687
               

               
Cow position:
               
chr20:4893096-4892964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
551-724
               

               
Cow position:
               
chr20:12420820-12420644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
551-762
               

               
Cow position:
               
chr20:40511956-40511742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
102, 13
               

               
Conread position:
               
551-793
               

               
Cow position:
               
chr20:22704089-22704336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
72, 207
               

               
Conread position:
               
551-917
               

               
Cow position:
               
chr20:14735478-14735850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
137, 13
               

               
Conread position:
               
552-709
               

               
Cow position:
               
chr20:18551165-18551329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
552-729
               

               
Cow position:
               
chr20:11043695-11043522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
553-796
               

               
Cow position:
               
chr20:5269266-5269018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
75, 87
               

               
Conread position:
               
554-724
               

               
Cow position:
               
chr20:35760475-35760645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
128, 93
               

               
Conread position:
               
554-734
               

               
Cow position:
               
chr20:32069053-32068868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
70, 177
               

               
Conread position:
               
554-799
               

               
Cow position:
               
chr20:37272523-37272762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
555-758
               

               
Cow position:
               
chr20:13994615-13994825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
555-793
               

               
Cow position:
               
chr20:23846867-23846624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
68, 97
               

               
Conread position:
               
556-709
               

               
Cow position:
               
chr20:9923403-9923549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
132, 59
               

               
Conread position:
               
557-732
               

               
Cow position:
               
chr20:35907240-35907068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
118, 80
               

               
Conread position:
               
557-756
               

               
Cow position:
               
chr20:8020701-8020908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
557-793
               

               
Cow position:
               
chr20:28067619-28067378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
558-693
               

               
Cow position:
               
chr20:18423529-18423665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
558-753
               

               
Cow position:
               
chr20:26679931-26680133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
558-798
               

               
Cow position:
               
chr20:11542474-11542234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
65, 13
               

               
Conread position:
               
560-724
               

               
Cow position:
               
chr20:16935493-16935324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
563-793
               

               
Cow position:
               
chr20:36207615-36207849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
75, 117
               

               
Conread position:
               
564-712
               

               
Cow position:
               
chr20:37165540-37165689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
564-769
               

               
Cow position:
               
chr20:37200167-37200383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
565-747
               

               
Cow position:
               
chr20:21928719-21928907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
567-733
               

               
Cow position:
               
chr20:11864319-11864146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
567-757
               

               
Cow position:
               
chr20:34364852-34365036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
165, 45
               

               
Conread position:
               
574-769
               

               
Cow position:
               
chr20:7439025-7438830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
116, 33
               

               
Conread position:
               
577-767
               

               
Cow position:
               
chr20:3141410-3141594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
99, 72
               

               
Conread position:
               
577-793
               

               
Cow position:
               
chr20:14980688-14980468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
57, 114
               

               
Conread position:
               
579-757
               

               
Cow position:
               
chr20:9988416-9988593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
102, 153
               

               
Conread position:
               
580-793
               

               
Cow position:
               
chr20:3321308-3321091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 57
               

               
Conread position:
               
581-758
               

               
Cow position:
               
chr20:28831794-28831981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
582-724
               

               
Cow position:
               
chr20:7210867-7211015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
590-793
               

               
Cow position:
               
chr20:9701735-9701527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
594-723
               

               
Cow position:
               
chr20:20241944-20242071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
594-774
               

               
Cow position:
               
chr20:32988988-32988813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
118, 39
               

               
Conread position:
               
595-757
               

               
Cow position:
               
chr20:34221319-34221493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 118
               

               
Conread position:
               
595-761
               

               
Cow position:
               
chr20:5636325-5636498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
35, 152
               

               
Conread position:
               
597-723
               

               
Cow position:
               
chr20:13025761-13025635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
83, 18
               
Show alignments to all cow chromosomes.