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Cow genome map

           
Conread name:
           
Ss1.1-Pig4-TMW8039N11.3
        

               
Conread position:
               
15-390
               

               
Cow position:
               
chr24:6048853-6049228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 194
               

               
Conread position:
               
27-388
               

               
Cow position:
               
chr24:6336125-6336490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
50, 112
               

               
Conread position:
               
31-388
               

               
Cow position:
               
chr24:36559482-36559110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
53, 98
               

               
Conread position:
               
34-312
               

               
Cow position:
               
chr24:14872679-14872402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
61-311
               

               
Cow position:
               
chr24:6669840-6669589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
58, 24
               

               
Conread position:
               
76-392
               

               
Cow position:
               
chr24:6084389-6084721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
63, 34
               

               
Conread position:
               
77-310
               

               
Cow position:
               
chr24:7090844-7090608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
129, 44
               

               
Conread position:
               
88-311
               

               
Cow position:
               
chr24:12335435-12335214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
118, 21
               

               
Conread position:
               
88-388
               

               
Cow position:
               
chr24:19833725-19834038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
88-388
               

               
Cow position:
               
chr24:29187623-29187935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
132, 22
               

               
Conread position:
               
88-389
               

               
Cow position:
               
chr24:22971430-22971740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
125, 24
               

               
Conread position:
               
89-388
               

               
Cow position:
               
chr24:12086538-12086849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
91-382
               

               
Cow position:
               
chr24:4415189-4414888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
94-388
               

               
Cow position:
               
chr24:33933709-33934019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
100-390
               

               
Cow position:
               
chr24:6024758-6024457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
211, 13
               

               
Conread position:
               
117-310
               

               
Cow position:
               
chr24:6434598-6434793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
89, 140
               

               
Conread position:
               
117-390
               

               
Cow position:
               
chr24:43814124-43814411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
89, 138
               

               
Conread position:
               
117-390
               

               
Cow position:
               
chr24:44017893-44018181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
96, 139
               

               
Conread position:
               
117-393
               

               
Cow position:
               
chr24:13188533-13188824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
131-390
               

               
Cow position:
               
chr24:22793546-22793824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
153-381
               

               
Cow position:
               
chr24:12796812-12796578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
60, 171
               

               
Conread position:
               
159-310
               

               
Cow position:
               
chr24:16084253-16084101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
159-390
               

               
Cow position:
               
chr24:9188329-9188087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
159-390
               

               
Cow position:
               
chr24:12484916-12484670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
159-390
               

               
Cow position:
               
chr24:33738938-33738691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
159-393
               

               
Cow position:
               
chr24:7061796-7062045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
180-390
               

               
Cow position:
               
chr24:23505439-23505218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
388-637
               

               
Cow position:
               
chr24:38655524-38655272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
137, 38
               

               
Conread position:
               
390-737
               

               
Cow position:
               
chr24:30870073-30869724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
159, 32
               

               
Conread position:
               
392-765
               

               
Cow position:
               
chr24:6161276-6160897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
133, 39
               

               
Conread position:
               
394-604
               

               
Cow position:
               
chr24:27484632-27484420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
394-675
               

               
Cow position:
               
chr24:36722305-36722583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
127, 43
               

               
Conread position:
               
394-680
               

               
Cow position:
               
chr24:13304596-13304308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 27
               

               
Conread position:
               
394-711
               

               
Cow position:
               
chr24:13173582-13173254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
133, 44
               

               
Conread position:
               
394-732
               

               
Cow position:
               
chr24:12348638-12348982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
131, 27
               

               
Conread position:
               
394-739
               

               
Cow position:
               
chr24:13819514-13819865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
131, 30
               

               
Conread position:
               
394-746
               

               
Cow position:
               
chr24:39440983-39440621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 32
               

               
Conread position:
               
394-748
               

               
Cow position:
               
chr24:11118861-11119220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
134, 37
               

               
Conread position:
               
395-637
               

               
Cow position:
               
chr24:11327261-11327507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
130, 26
               

               
Conread position:
               
396-518
               

               
Cow position:
               
chr24:6676703-6676821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
396-732
               

               
Cow position:
               
chr24:17993098-17992754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
129, 25
               

               
Conread position:
               
396-732
               

               
Cow position:
               
chr24:29596230-29595894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 26
               

               
Conread position:
               
396-742
               

               
Cow position:
               
chr24:14279463-14279822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
399-520
               

               
Cow position:
               
chr24:14550178-14550062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
399-523
               

               
Cow position:
               
chr24:27889328-27889208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
399-523
               

               
Cow position:
               
chr24:31256687-31256562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
399-536
               

               
Cow position:
               
chr24:19804038-19804171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
399-544
               

               
Cow position:
               
chr24:16401521-16401374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
399-567
               

               
Cow position:
               
chr24:31758393-31758229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
145, 41
               

               
Conread position:
               
399-571
               

               
Cow position:
               
chr24:33428485-33428660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 27
               

               
Conread position:
               
399-625
               

               
Cow position:
               
chr24:35066884-35066655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-629
               

               
Cow position:
               
chr24:6080379-6080614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
7, 19
               

               
Conread position:
               
399-632
               

               
Cow position:
               
chr24:27593593-27593356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
399-635
               

               
Cow position:
               
chr24:27754275-27754512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
399-637
               

               
Cow position:
               
chr24:33938764-33939004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-637
               

               
Cow position:
               
chr24:40149489-40149249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-675
               

               
Cow position:
               
chr24:12191539-12191824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
399-675
               

               
Cow position:
               
chr24:27503006-27502731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-678
               

               
Cow position:
               
chr24:15666831-15666545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 27
               

               
Conread position:
               
399-678
               

               
Cow position:
               
chr24:19323897-19323622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
108, 15
               

               
Conread position:
               
399-680
               

               
Cow position:
               
chr24:23616274-23616555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
399-680
               

               
Cow position:
               
chr24:24002557-24002842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
399-680
               

               
Cow position:
               
chr24:39900742-39900459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
46, 37
               

               
Conread position:
               
399-687
               

               
Cow position:
               
chr24:38643209-38643509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
399-688
               

               
Cow position:
               
chr24:30766447-30766748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
28, 90
               

               
Conread position:
               
399-693
               

               
Cow position:
               
chr24:37975491-37975194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
399-708
               

               
Cow position:
               
chr24:5448485-5448169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
399-708
               

               
Cow position:
               
chr24:12508074-12508389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-709
               

               
Cow position:
               
chr24:22193305-22193624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
399-709
               

               
Cow position:
               
chr24:28303771-28303460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
123, 35
               

               
Conread position:
               
399-711
               

               
Cow position:
               
chr24:45216536-45216218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
399-719
               

               
Cow position:
               
chr24:18025386-18025066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
399-721
               

               
Cow position:
               
chr24:27844941-27844617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
399-723
               

               
Cow position:
               
chr24:9070856-9070525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
116, 23
               

               
Conread position:
               
399-723
               

               
Cow position:
               
chr24:19679451-19679784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
399-723
               

               
Cow position:
               
chr24:33621907-33621581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
399-724
               

               
Cow position:
               
chr24:5141511-5141852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
47, 23
               

               
Conread position:
               
399-724
               

               
Cow position:
               
chr24:7001489-7001158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
399-729
               

               
Cow position:
               
chr24:5607556-5607225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
399-729
               

               
Cow position:
               
chr24:21104558-21104894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
399-729
               

               
Cow position:
               
chr24:31302600-31302928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
399-731
               

               
Cow position:
               
chr24:33985435-33985097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr24:7030570-7030239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 124
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr24:19475698-19476021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
177, 23
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr24:19658124-19658473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr24:29170555-29170885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
277, 35
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr24:29191193-29191525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr24:32360948-32360605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr24:32693284-32693621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 27
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr24:33230245-33230592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr24:33238971-33238626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 23
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr24:35572066-35572404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 23
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr24:35823018-35822676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr24:37246639-37246295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 27
               

               
Conread position:
               
399-732
               

               
Cow position:
               
chr24:38814553-38814882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 24
               

               
Conread position:
               
399-734
               

               
Cow position:
               
chr24:36174195-36173864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
399-737
               

               
Cow position:
               
chr24:6154411-6154732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
162, 37
               

               
Conread position:
               
399-746
               

               
Cow position:
               
chr24:2391770-2392130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
399-746
               

               
Cow position:
               
chr24:27270375-27270715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
132, 23
               

               
Conread position:
               
399-755
               

               
Cow position:
               
chr24:18741991-18741628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
399-756
               

               
Cow position:
               
chr24:27720168-27719812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 17
               

               
Conread position:
               
399-757
               

               
Cow position:
               
chr24:27906007-27906382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
399-757
               

               
Cow position:
               
chr24:29360398-29360051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
399-757
               

               
Cow position:
               
chr24:32370338-32369974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 235
               

               
Conread position:
               
399-761
               

               
Cow position:
               
chr24:16625919-16625540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 30
               

               
Conread position:
               
399-761
               

               
Cow position:
               
chr24:40056140-40055781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 8
               

               
Conread position:
               
399-762
               

               
Cow position:
               
chr24:6149612-6149971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
128, 22
               

               
Conread position:
               
399-762
               

               
Cow position:
               
chr24:27052912-27052545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 23
               

               
Conread position:
               
399-762
               

               
Cow position:
               
chr24:32054244-32054609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 236
               

               
Conread position:
               
399-762
               

               
Cow position:
               
chr24:33098914-33098536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 146
               

               
Conread position:
               
399-765
               

               
Cow position:
               
chr24:15472931-15473312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
27, 372
               

               
Conread position:
               
399-769
               

               
Cow position:
               
chr24:39492876-39493251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 23
               

               
Conread position:
               
399-776
               

               
Cow position:
               
chr24:36780326-36780700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
125, 22
               

               
Conread position:
               
399-793
               

               
Cow position:
               
chr24:202054-201663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
399-793
               

               
Cow position:
               
chr24:17104984-17104596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 23
               

               
Conread position:
               
399-793
               

               
Cow position:
               
chr24:27148986-27149373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 23
               

               
Conread position:
               
399-793
               

               
Cow position:
               
chr24:27290455-27290845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 30
               

               
Conread position:
               
399-799
               

               
Cow position:
               
chr24:6141377-6140971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
399-799
               

               
Cow position:
               
chr24:32609213-32609627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
399-799
               

               
Cow position:
               
chr24:39159965-39159567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 30
               

               
Conread position:
               
399-805
               

               
Cow position:
               
chr24:28353738-28354140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
399-807
               

               
Cow position:
               
chr24:19466354-19465930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 27
               

               
Conread position:
               
400-680
               

               
Cow position:
               
chr24:11064450-11064716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
400-711
               

               
Cow position:
               
chr24:22975716-22976037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
121, 21
               

               
Conread position:
               
400-723
               

               
Cow position:
               
chr24:14249672-14249340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
120, 16
               

               
Conread position:
               
400-724
               

               
Cow position:
               
chr24:2993351-2993016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
400-732
               

               
Cow position:
               
chr24:11006793-11007136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
125, 31
               

               
Conread position:
               
400-732
               

               
Cow position:
               
chr24:20970212-20969883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
121, 26
               

               
Conread position:
               
400-768
               

               
Cow position:
               
chr24:44987793-44987423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
125, 29
               

               
Conread position:
               
400-809
               

               
Cow position:
               
chr24:6160504-6160100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
124, 22
               

               
Conread position:
               
401-679
               

               
Cow position:
               
chr24:29845686-29845409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
120, 54
               

               
Conread position:
               
401-732
               

               
Cow position:
               
chr24:3153004-3152664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
36, 139
               

               
Conread position:
               
402-628
               

               
Cow position:
               
chr24:7527809-7527589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
155, 19
               

               
Conread position:
               
402-631
               

               
Cow position:
               
chr24:5130715-5130482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
402-631
               

               
Cow position:
               
chr24:14760812-14761034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
402-632
               

               
Cow position:
               
chr24:18839731-18839505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
402-681
               

               
Cow position:
               
chr24:32456010-32456294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
402-692
               

               
Cow position:
               
chr24:18847498-18847778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
221, 20
               

               
Conread position:
               
402-723
               

               
Cow position:
               
chr24:23034247-23034577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
121, 20
               

               
Conread position:
               
402-723
               

               
Cow position:
               
chr24:39238380-39238709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
119, 24
               

               
Conread position:
               
402-732
               

               
Cow position:
               
chr24:3631100-3631425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 5
               

               
Conread position:
               
402-732
               

               
Cow position:
               
chr24:9550171-9550510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
123, 19
               

               
Conread position:
               
402-753
               

               
Cow position:
               
chr24:28553972-28553612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
35, 179
               

               
Conread position:
               
402-757
               

               
Cow position:
               
chr24:2674908-2675264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
402-800
               

               
Cow position:
               
chr24:39729838-39729433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
403-582
               

               
Cow position:
               
chr24:10517857-10518039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
122, 19
               

               
Conread position:
               
403-667
               

               
Cow position:
               
chr24:36710723-36710991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
124, 19
               

               
Conread position:
               
403-679
               

               
Cow position:
               
chr24:28067343-28067622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
23, 130
               

               
Conread position:
               
403-680
               

               
Cow position:
               
chr24:1272293-1272000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 106
               

               
Conread position:
               
405-569
               

               
Cow position:
               
chr24:39217040-39216877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
120, 16
               

               
Conread position:
               
405-637
               

               
Cow position:
               
chr24:17720505-17720270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
405-679
               

               
Cow position:
               
chr24:7596647-7596367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
117, 11
               

               
Conread position:
               
405-679
               

               
Cow position:
               
chr24:13872370-13872651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
405-679
               

               
Cow position:
               
chr24:15674719-15674437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
120, 16
               

               
Conread position:
               
405-679
               

               
Cow position:
               
chr24:38488436-38488717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
405-680
               

               
Cow position:
               
chr24:16541259-16540992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 11
               

               
Conread position:
               
405-723
               

               
Cow position:
               
chr24:13492411-13492740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
113, 11
               

               
Conread position:
               
405-724
               

               
Cow position:
               
chr24:35795685-35795369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
120, 12
               

               
Conread position:
               
405-732
               

               
Cow position:
               
chr24:6413391-6413727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
122, 16
               

               
Conread position:
               
405-732
               

               
Cow position:
               
chr24:32740028-32739697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
119, 29
               

               
Conread position:
               
405-734
               

               
Cow position:
               
chr24:15881002-15881338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
117, 11
               

               
Conread position:
               
405-798
               

               
Cow position:
               
chr24:6325456-6325058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
115, 11
               

               
Conread position:
               
405-800
               

               
Cow position:
               
chr24:18266579-18266181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
122, 17
               

               
Conread position:
               
406-723
               

               
Cow position:
               
chr24:5849827-5849491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
21, 293
               

               
Conread position:
               
406-724
               

               
Cow position:
               
chr24:25677613-25677946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
21, 87
               

               
Conread position:
               
406-734
               

               
Cow position:
               
chr24:3794406-3794726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
115, 10
               

               
Conread position:
               
409-748
               

               
Cow position:
               
chr24:40129701-40130062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 28
               

               
Conread position:
               
416-637
               

               
Cow position:
               
chr24:12198430-12198204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
105, 154
               

               
Conread position:
               
417-550
               

               
Cow position:
               
chr24:18234696-18234834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-559
               

               
Cow position:
               
chr24:35815562-35815414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-565
               

               
Cow position:
               
chr24:4649356-4649199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-565
               

               
Cow position:
               
chr24:26795338-26795495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-565
               

               
Cow position:
               
chr24:40789673-40789516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-625
               

               
Cow position:
               
chr24:26412968-26413185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
417-628
               

               
Cow position:
               
chr24:15084501-15084721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-632
               

               
Cow position:
               
chr24:27153731-27153507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-635
               

               
Cow position:
               
chr24:14363489-14363262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-637
               

               
Cow position:
               
chr24:3851516-3851745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-637
               

               
Cow position:
               
chr24:9901292-9901521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
417-637
               

               
Cow position:
               
chr24:11104230-11104001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-637
               

               
Cow position:
               
chr24:11748212-11747983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-637
               

               
Cow position:
               
chr24:13319533-13319305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 172
               

               
Conread position:
               
417-637
               

               
Cow position:
               
chr24:16993952-16993724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
417-637
               

               
Cow position:
               
chr24:18740447-18740216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-637
               

               
Cow position:
               
chr24:22047152-22046923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:207084-206812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 175
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:1840949-1840674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:2118792-2119067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:3163392-3163666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
20, 157
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:8331585-8331312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:8754437-8754712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:9365879-9365604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:11215466-11215191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:11311603-11311326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:12377195-12376921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:12518735-12519010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:12696202-12695927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:12697492-12697217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:13042071-13041796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:15810240-15809965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:17188350-17188075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:17455969-17456244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:21210996-21210722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
23, 175
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:22954462-22954737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:25373024-25373299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:27760443-27760718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:28494665-28494940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:28832940-28832665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:35877339-35877064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:36308498-36308773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:36326279-36326554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:38296978-38297253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:40427770-40427502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
23, 151
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:42693817-42693542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr24:43906780-43907051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-680
               

               
Cow position:
               
chr24:9087881-9087617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 117
               

               
Conread position:
               
417-722
               

               
Cow position:
               
chr24:1861976-1861656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:4667002-4667322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 195
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:5929700-5930020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
20, 27
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:6019049-6018728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:7782209-7781888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:7986294-7985973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:8776897-8777217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
20, 288
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:10035122-10034801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:10655533-10655854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
24, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:12701163-12700842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 300
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:13178824-13178503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:14353267-14353588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:15026521-15026200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:15297037-15297357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
23, 158
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:16475385-16475706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:22795477-22795794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 119
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:27185553-27185874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:27852473-27852152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
14, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:29097551-29097231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 255
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:29788367-29788046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:34271111-34271432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:36027593-36027271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 129
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:36268592-36268911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
20, 157
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:37142229-37142550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 219
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:38896955-38896634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:39253846-39254167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
20, 289
               

               
Conread position:
               
417-723
               

               
Cow position:
               
chr24:42835402-42835723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-724
               

               
Cow position:
               
chr24:20221111-20221429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
417-732
               

               
Cow position:
               
chr24:5990266-5989935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
417-732
               

               
Cow position:
               
chr24:13185772-13185445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
103, 183
               

               
Conread position:
               
417-732
               

               
Cow position:
               
chr24:25706239-25705910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr24:193008-193336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 320
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr24:5931460-5931785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 205
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr24:6436383-6436712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
20, 229
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr24:20368483-20368816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
20, 219
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr24:20604671-20605002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
20, 323
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr24:35793770-35794103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
20, 325
               

               
Conread position:
               
417-734
               

               
Cow position:
               
chr24:39066941-39066610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
20, 323
               

               
Conread position:
               
417-765
               

               
Cow position:
               
chr24:18113378-18113744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 356
               

               
Conread position:
               
417-765
               

               
Cow position:
               
chr24:43635023-43635389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
95, 309
               

               
Conread position:
               
417-798
               

               
Cow position:
               
chr24:599771-599381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
20, 217
               

               
Conread position:
               
417-809
               

               
Cow position:
               
chr24:15802735-15803145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
23, 323
               

               
Conread position:
               
417-809
               

               
Cow position:
               
chr24:40381916-40381514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
20, 69
               

               
Conread position:
               
418-734
               

               
Cow position:
               
chr24:17161055-17160725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 322
               

               
Conread position:
               
421-679
               

               
Cow position:
               
chr24:11152275-11152546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
421-723
               

               
Cow position:
               
chr24:9044771-9044454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 285
               

               
Conread position:
               
422-679
               

               
Cow position:
               
chr24:14145958-14145694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
99, 146
               

               
Conread position:
               
422-758
               

               
Cow position:
               
chr24:14337328-14337675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
98, 230
               

               
Conread position:
               
424-604
               

               
Cow position:
               
chr24:32087559-32087373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
424-677
               

               
Cow position:
               
chr24:41963234-41963491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
91, 154
               

               
Conread position:
               
424-680
               

               
Cow position:
               
chr24:38593246-38593514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
97, 152
               

               
Conread position:
               
424-733
               

               
Cow position:
               
chr24:18732515-18732204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 79
               

               
Conread position:
               
424-753
               

               
Cow position:
               
chr24:12851338-12851656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
101, 76
               

               
Conread position:
               
424-774
               

               
Cow position:
               
chr24:6450132-6450456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
308, 108
               

               
Conread position:
               
424-774
               

               
Cow position:
               
chr24:27683837-27683484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
424-793
               

               
Cow position:
               
chr24:31811787-31812163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 149
               

               
Conread position:
               
425-632
               

               
Cow position:
               
chr24:5624622-5624417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
124, 41
               

               
Conread position:
               
425-680
               

               
Cow position:
               
chr24:38479363-38479108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
425-724
               

               
Cow position:
               
chr24:11940965-11941275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
100, 147
               

               
Conread position:
               
425-753
               

               
Cow position:
               
chr24:3493497-3493826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 17
               

               
Conread position:
               
425-792
               

               
Cow position:
               
chr24:41985567-41985969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 349
               

               
Conread position:
               
425-794
               

               
Cow position:
               
chr24:814661-814286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 305
               

               
Conread position:
               
426-613
               

               
Cow position:
               
chr24:32070270-32070466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
426-664
               

               
Cow position:
               
chr24:4616144-4615901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
98, 220
               

               
Conread position:
               
426-680
               

               
Cow position:
               
chr24:35872323-35872069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
168, 101
               

               
Conread position:
               
426-792
               

               
Cow position:
               
chr24:18485398-18485021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 235
               

               
Conread position:
               
426-793
               

               
Cow position:
               
chr24:211583-211961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 342
               

               
Conread position:
               
426-797
               

               
Cow position:
               
chr24:29673121-29673501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 344
               

               
Conread position:
               
427-536
               

               
Cow position:
               
chr24:31816155-31816264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
427-551
               

               
Cow position:
               
chr24:34761441-34761567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
94, 116
               

               
Conread position:
               
427-572
               

               
Cow position:
               
chr24:27039485-27039637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
427-613
               

               
Cow position:
               
chr24:15372726-15372917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
103, 89
               

               
Conread position:
               
427-621
               

               
Cow position:
               
chr24:32419626-32419827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
427-624
               

               
Cow position:
               
chr24:25524670-25524879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
427-625
               

               
Cow position:
               
chr24:13117566-13117771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
427-632
               

               
Cow position:
               
chr24:29073074-29072863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
98, 190
               

               
Conread position:
               
427-637
               

               
Cow position:
               
chr24:8021176-8021397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
427-637
               

               
Cow position:
               
chr24:15793085-15792869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
427-637
               

               
Cow position:
               
chr24:33639564-33639348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 190
               

               
Conread position:
               
427-651
               

               
Cow position:
               
chr24:12503995-12504228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
427-654
               

               
Cow position:
               
chr24:37037217-37037451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
80, 147
               

               
Conread position:
               
427-660
               

               
Cow position:
               
chr24:43506910-43506669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
427-662
               

               
Cow position:
               
chr24:27763405-27763647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
94, 137
               

               
Conread position:
               
427-674
               

               
Cow position:
               
chr24:31309027-31309272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 210
               

               
Conread position:
               
427-675
               

               
Cow position:
               
chr24:6067413-6067157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
427-678
               

               
Cow position:
               
chr24:17999475-17999719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 20
               

               
Conread position:
               
427-679
               

               
Cow position:
               
chr24:25269390-25269123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
63, 162
               

               
Conread position:
               
427-679
               

               
Cow position:
               
chr24:32014727-32014988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr24:16610847-16610583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 203
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr24:17544029-17543771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr24:20283279-20283015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr24:35836631-35836373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
126, 5
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr24:36715153-36715417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
95, 19
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr24:37080778-37080530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
115, 87
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr24:38002126-38001872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
131, 77
               

               
Conread position:
               
427-680
               

               
Cow position:
               
chr24:39500675-39500416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
126, 96
               

               
Conread position:
               
427-687
               

               
Cow position:
               
chr24:33730468-33730725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
97, 123
               

               
Conread position:
               
427-688
               

               
Cow position:
               
chr24:11045944-11045681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
199, 143
               

               
Conread position:
               
427-688
               

               
Cow position:
               
chr24:33379658-33379928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
427-703
               

               
Cow position:
               
chr24:29375942-29376219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
97, 30
               

               
Conread position:
               
427-710
               

               
Cow position:
               
chr24:32213067-32212769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
94, 148
               

               
Conread position:
               
427-711
               

               
Cow position:
               
chr24:16870183-16869887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
427-711
               

               
Cow position:
               
chr24:18222561-18222263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 207
               

               
Conread position:
               
427-715
               

               
Cow position:
               
chr24:30768321-30768615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
121, 85
               

               
Conread position:
               
427-723
               

               
Cow position:
               
chr24:6035246-6034945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
427-723
               

               
Cow position:
               
chr24:14320053-14319744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
98, 283
               

               
Conread position:
               
427-723
               

               
Cow position:
               
chr24:24250327-24250635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
94, 221
               

               
Conread position:
               
427-723
               

               
Cow position:
               
chr24:26846675-26846366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
26, 83
               

               
Conread position:
               
427-723
               

               
Cow position:
               
chr24:39681473-39681761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
261, 87
               

               
Conread position:
               
427-724
               

               
Cow position:
               
chr24:18257467-18257165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 256
               

               
Conread position:
               
427-724
               

               
Cow position:
               
chr24:29180504-29180796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
94, 137
               

               
Conread position:
               
427-729
               

               
Cow position:
               
chr24:23051968-23051654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
427-731
               

               
Cow position:
               
chr24:18374394-18374693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 66
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr24:7917766-7917446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 139
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr24:12090905-12091224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr24:19815481-19815163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr24:21264903-21264592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 144
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr24:21770053-21770357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
98, 219
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr24:32158664-32158359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
94, 118
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr24:32854141-32854461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
100, 241
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr24:35986108-35985808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
122, 96
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr24:40035161-40034845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
427-732
               

               
Cow position:
               
chr24:41006452-41006768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
98, 46
               

               
Conread position:
               
427-733
               

               
Cow position:
               
chr24:38588711-38589028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
427-733
               

               
Cow position:
               
chr24:40466480-40466162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
427-734
               

               
Cow position:
               
chr24:31067121-31066806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
93, 307
               

               
Conread position:
               
427-740
               

               
Cow position:
               
chr24:5608472-5608799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
98, 155
               

               
Conread position:
               
427-746
               

               
Cow position:
               
chr24:6071201-6071531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 140
               

               
Conread position:
               
427-746
               

               
Cow position:
               
chr24:17406999-17407321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 25
               

               
Conread position:
               
427-747
               

               
Cow position:
               
chr24:32205193-32204860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 231
               

               
Conread position:
               
427-752
               

               
Cow position:
               
chr24:15919309-15919647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 71
               

               
Conread position:
               
427-753
               

               
Cow position:
               
chr24:34564727-34565064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
71, 147
               

               
Conread position:
               
427-757
               

               
Cow position:
               
chr24:27809782-27810131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
427-757
               

               
Cow position:
               
chr24:28721483-28721835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 171
               

               
Conread position:
               
427-757
               

               
Cow position:
               
chr24:32125019-32124696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
165, 31
               

               
Conread position:
               
427-757
               

               
Cow position:
               
chr24:36486461-36486114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 49
               

               
Conread position:
               
427-757
               

               
Cow position:
               
chr24:37205270-37204934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
427-761
               

               
Cow position:
               
chr24:17955833-17955494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
9, 101
               

               
Conread position:
               
427-762
               

               
Cow position:
               
chr24:28062549-28062900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 87
               

               
Conread position:
               
427-762
               

               
Cow position:
               
chr24:30484331-30484001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 105
               

               
Conread position:
               
427-765
               

               
Cow position:
               
chr24:43432388-43432745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
14, 161
               

               
Conread position:
               
427-769
               

               
Cow position:
               
chr24:6340621-6340968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 15
               

               
Conread position:
               
427-775
               

               
Cow position:
               
chr24:31323891-31324241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 96
               

               
Conread position:
               
427-793
               

               
Cow position:
               
chr24:11886767-11887134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 26
               

               
Conread position:
               
427-793
               

               
Cow position:
               
chr24:30235481-30235847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
97, 145
               

               
Conread position:
               
427-795
               

               
Cow position:
               
chr24:28496985-28496605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
95, 143
               

               
Conread position:
               
427-801
               

               
Cow position:
               
chr24:15247022-15246659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
19, 67
               

               
Conread position:
               
427-801
               

               
Cow position:
               
chr24:42581228-42580857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
94, 263
               

               
Conread position:
               
427-849
               

               
Cow position:
               
chr24:11734339-11734754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
207, 104
               

               
Conread position:
               
427-914
               

               
Cow position:
               
chr24:29064040-29063556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 216
               

               
Conread position:
               
428-550
               

               
Cow position:
               
chr24:41982837-41982712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
428-565
               

               
Cow position:
               
chr24:28216450-28216594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
428-723
               

               
Cow position:
               
chr24:32668884-32669183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
428-732
               

               
Cow position:
               
chr24:10308883-10309177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
124, 14
               

               
Conread position:
               
428-732
               

               
Cow position:
               
chr24:16558079-16557762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
428-732
               

               
Cow position:
               
chr24:34213630-34213310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
429-604
               

               
Cow position:
               
chr24:16378685-16378511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
115, 145
               

               
Conread position:
               
429-637
               

               
Cow position:
               
chr24:8608400-8608612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
120, 140
               

               
Conread position:
               
429-637
               

               
Cow position:
               
chr24:13354444-13354229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
429-679
               

               
Cow position:
               
chr24:6085531-6085792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
429-679
               

               
Cow position:
               
chr24:16993715-16993454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
429-680
               

               
Cow position:
               
chr24:35503045-35502796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
429-681
               

               
Cow position:
               
chr24:11080861-11080598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
429-681
               

               
Cow position:
               
chr24:12447413-12447676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
429-681
               

               
Cow position:
               
chr24:22187507-22187256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
95, 151
               

               
Conread position:
               
429-681
               

               
Cow position:
               
chr24:30515002-30515252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 65
               

               
Conread position:
               
429-685
               

               
Cow position:
               
chr24:13238015-13238271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
95, 33
               

               
Conread position:
               
429-720
               

               
Cow position:
               
chr24:6443371-6443673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
120, 96
               

               
Conread position:
               
429-723
               

               
Cow position:
               
chr24:274235-273929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
91, 239
               

               
Conread position:
               
429-723
               

               
Cow position:
               
chr24:17251861-17251554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
91, 275
               

               
Conread position:
               
429-734
               

               
Cow position:
               
chr24:14124695-14125013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
91, 275
               

               
Conread position:
               
429-764
               

               
Cow position:
               
chr24:25664735-25665075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
96, 162
               

               
Conread position:
               
429-793
               

               
Cow position:
               
chr24:11876489-11876862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 67
               

               
Conread position:
               
430-677
               

               
Cow position:
               
chr24:25894443-25894701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
430-762
               

               
Cow position:
               
chr24:36555222-36554887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 134
               

               
Conread position:
               
430-792
               

               
Cow position:
               
chr24:44041400-44041032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 84
               

               
Conread position:
               
431-671
               

               
Cow position:
               
chr24:28335932-28335683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
90, 57
               

               
Conread position:
               
431-681
               

               
Cow position:
               
chr24:30262935-30263191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
431-748
               

               
Cow position:
               
chr24:11839787-11840124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 146
               

               
Conread position:
               
432-811
               

               
Cow position:
               
chr24:3165433-3165809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 72
               

               
Conread position:
               
433-734
               

               
Cow position:
               
chr24:13880665-13880978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
87, 305
               

               
Conread position:
               
434-723
               

               
Cow position:
               
chr24:16298373-16298665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 82
               

               
Conread position:
               
435-637
               

               
Cow position:
               
chr24:228117-227908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
86, 40
               

               
Conread position:
               
435-680
               

               
Cow position:
               
chr24:19837109-19837363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
435-680
               

               
Cow position:
               
chr24:19886168-19886422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
435-711
               

               
Cow position:
               
chr24:8814400-8814100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
112, 208
               

               
Conread position:
               
435-746
               

               
Cow position:
               
chr24:27874213-27874535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 213
               

               
Conread position:
               
435-800
               

               
Cow position:
               
chr24:20024217-20024594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 333
               

               
Conread position:
               
436-732
               

               
Cow position:
               
chr24:13625901-13626201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
87, 156
               

               
Conread position:
               
436-734
               

               
Cow position:
               
chr24:6090929-6091239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
84, 302
               

               
Conread position:
               
436-734
               

               
Cow position:
               
chr24:15875018-15874708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 301
               

               
Conread position:
               
436-734
               

               
Cow position:
               
chr24:43384366-43384676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 302
               

               
Conread position:
               
437-687
               

               
Cow position:
               
chr24:28689320-28689578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
7, 201
               

               
Conread position:
               
439-677
               

               
Cow position:
               
chr24:33372177-33372414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
191, 83
               

               
Conread position:
               
439-746
               

               
Cow position:
               
chr24:17309488-17309183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
85, 194
               

               
Conread position:
               
440-688
               

               
Cow position:
               
chr24:39289632-39289887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
81, 126
               

               
Conread position:
               
440-708
               

               
Cow position:
               
chr24:23556713-23556435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
16, 75
               

               
Conread position:
               
442-679
               

               
Cow position:
               
chr24:28221349-28221101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
442-732
               

               
Cow position:
               
chr24:4241079-4240776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
83, 130
               

               
Conread position:
               
443-637
               

               
Cow position:
               
chr24:40781959-40781758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
443-793
               

               
Cow position:
               
chr24:39219227-39218866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 121
               

               
Conread position:
               
443-914
               

               
Cow position:
               
chr24:42102989-42103474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
444-637
               

               
Cow position:
               
chr24:12448015-12448215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
444-723
               

               
Cow position:
               
chr24:11080259-11079966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
444-772
               

               
Cow position:
               
chr24:18405684-18405361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 143
               

               
Conread position:
               
444-812
               

               
Cow position:
               
chr24:33153408-33153776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 45
               

               
Conread position:
               
445-633
               

               
Cow position:
               
chr24:30965064-30964873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
88, 156
               

               
Conread position:
               
445-723
               

               
Cow position:
               
chr24:3006406-3006697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 265
               

               
Conread position:
               
445-747
               

               
Cow position:
               
chr24:27543855-27543543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 305
               

               
Conread position:
               
445-762
               

               
Cow position:
               
chr24:24137239-24136910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
61, 176
               

               
Conread position:
               
446-732
               

               
Cow position:
               
chr24:12498622-12498915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
448-723
               

               
Cow position:
               
chr24:20923226-20923493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
109, 82
               

               
Conread position:
               
448-730
               

               
Cow position:
               
chr24:37546686-37546981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 262
               

               
Conread position:
               
448-774
               

               
Cow position:
               
chr24:39483100-39483437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
448-793
               

               
Cow position:
               
chr24:43363983-43364335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 37
               

               
Conread position:
               
451-686
               

               
Cow position:
               
chr24:28233017-28233261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 94
               

               
Conread position:
               
451-732
               

               
Cow position:
               
chr24:25320620-25320912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 5
               

               
Conread position:
               
452-724
               

               
Cow position:
               
chr24:37650307-37650579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
228, 82
               

               
Conread position:
               
453-680
               

               
Cow position:
               
chr24:5561596-5561828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 182
               

               
Conread position:
               
453-732
               

               
Cow position:
               
chr24:8873439-8873152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
74, 189
               

               
Conread position:
               
453-732
               

               
Cow position:
               
chr24:14648698-14648434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
96, 77
               

               
Conread position:
               
454-679
               

               
Cow position:
               
chr24:40249639-40249875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
454-680
               

               
Cow position:
               
chr24:11874994-11874770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
69, 82
               

               
Conread position:
               
454-680
               

               
Cow position:
               
chr24:29606437-29606204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
52, 42
               

               
Conread position:
               
454-723
               

               
Cow position:
               
chr24:43733601-43733878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
454-724
               

               
Cow position:
               
chr24:20874310-20874588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 51
               

               
Conread position:
               
454-724
               

               
Cow position:
               
chr24:38684473-38684193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
454-748
               

               
Cow position:
               
chr24:28690324-28690620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-37
               

               
Alignm gaps (pig, cow):
               
65, 177
               

               
Conread position:
               
455-631
               

               
Cow position:
               
chr24:42862288-42862464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
94, 58
               

               
Conread position:
               
455-679
               

               
Cow position:
               
chr24:27229414-27229188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
455-729
               

               
Cow position:
               
chr24:2402746-2402455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
455-753
               

               
Cow position:
               
chr24:33944024-33944343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
66, 176
               

               
Conread position:
               
455-798
               

               
Cow position:
               
chr24:40247467-40247811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
65, 115
               

               
Conread position:
               
456-723
               

               
Cow position:
               
chr24:33571632-33571912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
456-798
               

               
Cow position:
               
chr24:33573467-33573116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
64, 282
               

               
Conread position:
               
458-734
               

               
Cow position:
               
chr24:6921739-6922027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-25
               

               
Alignm gaps (pig, cow):
               
60, 280
               

               
Conread position:
               
462-613
               

               
Cow position:
               
chr24:4724666-4724819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
462-723
               

               
Cow position:
               
chr24:24491372-24491103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
58, 87
               

               
Conread position:
               
462-783
               

               
Cow position:
               
chr24:39850239-39849922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
59, 121
               

               
Conread position:
               
463-803
               

               
Cow position:
               
chr24:29027691-29028027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 98
               

               
Conread position:
               
464-679
               

               
Cow position:
               
chr24:27197330-27197104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
464-679
               

               
Cow position:
               
chr24:27688112-27687886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
465-635
               

               
Cow position:
               
chr24:44054501-44054324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
465-708
               

               
Cow position:
               
chr24:9590374-9590118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
465-723
               

               
Cow position:
               
chr24:15057032-15057308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
60, 128
               

               
Conread position:
               
465-747
               

               
Cow position:
               
chr24:29679670-29679375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
62, 19
               

               
Conread position:
               
465-777
               

               
Cow position:
               
chr24:17412384-17412704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
94, 57
               

               
Conread position:
               
466-680
               

               
Cow position:
               
chr24:185171-184953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 173
               

               
Conread position:
               
466-700
               

               
Cow position:
               
chr24:15288499-15288744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
54, 90
               

               
Conread position:
               
466-718
               

               
Cow position:
               
chr24:6956826-6957080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
466-723
               

               
Cow position:
               
chr24:634632-634892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
55, 98
               

               
Conread position:
               
466-741
               

               
Cow position:
               
chr24:26385015-26384724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
467-732
               

               
Cow position:
               
chr24:34532766-34533044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
467-796
               

               
Cow position:
               
chr24:20225380-20225717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
54, 299
               

               
Conread position:
               
468-680
               

               
Cow position:
               
chr24:6341813-6342037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
469-734
               

               
Cow position:
               
chr24:3214402-3214673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
87, 44
               

               
Conread position:
               
469-743
               

               
Cow position:
               
chr24:38374933-38375215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 100
               

               
Conread position:
               
470-732
               

               
Cow position:
               
chr24:21252804-21252532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 250
               

               
Conread position:
               
470-757
               

               
Cow position:
               
chr24:27267284-27267578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 164
               

               
Conread position:
               
473-732
               

               
Cow position:
               
chr24:31370099-31369831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
52, 167
               

               
Conread position:
               
474-750
               

               
Cow position:
               
chr24:7301108-7301398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
46, 36
               

               
Conread position:
               
476-728
               

               
Cow position:
               
chr24:19444382-19444119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
49, 90
               

               
Conread position:
               
477-734
               

               
Cow position:
               
chr24:12957067-12956802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
45, 257
               

               
Conread position:
               
477-793
               

               
Cow position:
               
chr24:15508890-15508564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 137
               

               
Conread position:
               
478-729
               

               
Cow position:
               
chr24:24498518-24498260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 168
               

               
Conread position:
               
479-680
               

               
Cow position:
               
chr24:34272457-34272664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 166
               

               
Conread position:
               
479-724
               

               
Cow position:
               
chr24:17159409-17159659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
479-732
               

               
Cow position:
               
chr24:5435387-5435128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
480-807
               

               
Cow position:
               
chr24:5754497-5754823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 139
               

               
Conread position:
               
486-709
               

               
Cow position:
               
chr24:28319544-28319307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
488-719
               

               
Cow position:
               
chr24:27735907-27735669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
489-746
               

               
Cow position:
               
chr24:38347344-38347618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 95
               

               
Conread position:
               
492-678
               

               
Cow position:
               
chr24:20988332-20988141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
35, 120
               

               
Conread position:
               
492-694
               

               
Cow position:
               
chr24:40300824-40301037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
31, 207
               

               
Conread position:
               
493-708
               

               
Cow position:
               
chr24:17311540-17311319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
34, 184
               

               
Conread position:
               
494-770
               

               
Cow position:
               
chr24:34315029-34315311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
34, 79
               

               
Conread position:
               
496-732
               

               
Cow position:
               
chr24:18734688-18734435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
26, 107
               

               
Conread position:
               
497-724
               

               
Cow position:
               
chr24:40908689-40908930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
500-800
               

               
Cow position:
               
chr24:26929273-26928963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
25, 146
               

               
Conread position:
               
504-753
               

               
Cow position:
               
chr24:18970808-18970567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
53, 29
               

               
Conread position:
               
505-756
               

               
Cow position:
               
chr24:29781843-29782108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
505-800
               

               
Cow position:
               
chr24:27341343-27341039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
18, 257
               

               
Conread position:
               
509-724
               

               
Cow position:
               
chr24:8770272-8770493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
510-775
               

               
Cow position:
               
chr24:16556941-16556677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
81, 19
               

               
Conread position:
               
511-793
               

               
Cow position:
               
chr24:6914074-6913789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
517-793
               

               
Cow position:
               
chr24:35795045-35794761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
16, 244
               

               
Conread position:
               
518-732
               

               
Cow position:
               
chr24:19535547-19535338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 59
               

               
Conread position:
               
518-768
               

               
Cow position:
               
chr24:28699292-28699538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
159, 121
               

               
Conread position:
               
519-793
               

               
Cow position:
               
chr24:30177934-30178215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 108
               

               
Conread position:
               
520-692
               

               
Cow position:
               
chr24:14550204-14550383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
30, 138
               

               
Conread position:
               
520-799
               

               
Cow position:
               
chr24:35332418-35332703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
520-805
               

               
Cow position:
               
chr24:42345309-42345012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
27, 52
               

               
Conread position:
               
524-699
               

               
Cow position:
               
chr24:19804390-19804574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
524-730
               

               
Cow position:
               
chr24:31159331-31159531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
28, 103
               

               
Conread position:
               
524-791
               

               
Cow position:
               
chr24:35405868-35405592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
29, 212
               

               
Conread position:
               
530-676
               

               
Cow position:
               
chr24:28143972-28143828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
128, 44
               

               
Conread position:
               
530-799
               

               
Cow position:
               
chr24:14729120-14729383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
19, 40
               

               
Conread position:
               
536-732
               

               
Cow position:
               
chr24:23695180-23694979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
5, 174
               

               
Conread position:
               
538-732
               

               
Cow position:
               
chr24:25950945-25950750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
541-757
               

               
Cow position:
               
chr24:29388970-29389185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
147, 92
               

               
Conread position:
               
545-793
               

               
Cow position:
               
chr24:27608370-27608124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
143, 151
               

               
Conread position:
               
548-686
               

               
Cow position:
               
chr24:42380971-42380834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
548-707
               

               
Cow position:
               
chr24:28699788-28699949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
133, 0
               

               
Conread position:
               
548-712
               

               
Cow position:
               
chr24:31816316-31816484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 117
               

               
Conread position:
               
548-721
               

               
Cow position:
               
chr24:2730839-2730664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
548-723
               

               
Cow position:
               
chr24:1269535-1269705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
142, 85
               

               
Conread position:
               
548-723
               

               
Cow position:
               
chr24:27941277-27941102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
548-723
               

               
Cow position:
               
chr24:35529654-35529827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
548-724
               

               
Cow position:
               
chr24:43370979-43371155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 98
               

               
Conread position:
               
548-731
               

               
Cow position:
               
chr24:28600877-28600699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
548-732
               

               
Cow position:
               
chr24:6900555-6900743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
548-732
               

               
Cow position:
               
chr24:18331467-18331638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
40, 76
               

               
Conread position:
               
548-732
               

               
Cow position:
               
chr24:18974932-18975117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 10
               

               
Conread position:
               
548-746
               

               
Cow position:
               
chr24:591641-591847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
548-752
               

               
Cow position:
               
chr24:18324346-18324561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
548-753
               

               
Cow position:
               
chr24:18390557-18390348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
128, 20
               

               
Conread position:
               
548-768
               

               
Cow position:
               
chr24:35073823-35074048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
548-770
               

               
Cow position:
               
chr24:19769229-19769444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 74
               

               
Conread position:
               
548-793
               

               
Cow position:
               
chr24:25885427-25885184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
65, 93
               

               
Conread position:
               
548-793
               

               
Cow position:
               
chr24:27967811-27968058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
140, 85
               

               
Conread position:
               
548-793
               

               
Cow position:
               
chr24:30314305-30314052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
75, 190
               

               
Conread position:
               
548-793
               

               
Cow position:
               
chr24:36404416-36404168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
75, 24
               

               
Conread position:
               
548-793
               

               
Cow position:
               
chr24:43200543-43200296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
548-800
               

               
Cow position:
               
chr24:7913729-7913987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
82, 226
               

               
Conread position:
               
548-800
               

               
Cow position:
               
chr24:17294456-17294209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
127, 85
               

               
Conread position:
               
548-800
               

               
Cow position:
               
chr24:27096416-27096671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-29
               

               
Alignm gaps (pig, cow):
               
128, 86
               

               
Conread position:
               
548-801
               

               
Cow position:
               
chr24:3430466-3430718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
140, 69
               

               
Conread position:
               
548-899
               

               
Cow position:
               
chr24:15861870-15861514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
130, 212
               

               
Conread position:
               
550-762
               

               
Cow position:
               
chr24:21860487-21860272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
132, 21
               

               
Conread position:
               
551-680
               

               
Cow position:
               
chr24:43832094-43832221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
551-732
               

               
Cow position:
               
chr24:30545122-30544943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
110, 88
               

               
Conread position:
               
551-803
               

               
Cow position:
               
chr24:5151969-5152219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
88, 17
               

               
Conread position:
               
554-775
               

               
Cow position:
               
chr24:2970870-2970644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
555-769
               

               
Cow position:
               
chr24:33724114-33723889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
555-801
               

               
Cow position:
               
chr24:23442843-23442599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
558-748
               

               
Cow position:
               
chr24:30229209-30229406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
76, 162
               

               
Conread position:
               
558-756
               

               
Cow position:
               
chr24:40184365-40184568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 24
               

               
Conread position:
               
558-793
               

               
Cow position:
               
chr24:17860510-17860284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
130, 72
               

               
Conread position:
               
564-732
               

               
Cow position:
               
chr24:30776922-30776749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
564-747
               

               
Cow position:
               
chr24:27748396-27748579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
124, 73
               

               
Conread position:
               
564-757
               

               
Cow position:
               
chr24:24755196-24755387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
125, 87
               

               
Conread position:
               
564-767
               

               
Cow position:
               
chr24:40849905-40850116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 204
               

               
Conread position:
               
564-800
               

               
Cow position:
               
chr24:18343795-18344044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
81, 227
               

               
Conread position:
               
565-762
               

               
Cow position:
               
chr24:20942917-20943117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
65, 41
               

               
Conread position:
               
577-753
               

               
Cow position:
               
chr24:2096129-2095950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
110, 99
               

               
Conread position:
               
577-757
               

               
Cow position:
               
chr24:42825738-42825550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-28
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
577-762
               

               
Cow position:
               
chr24:27207435-27207246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
105, 178
               

               
Conread position:
               
579-800
               

               
Cow position:
               
chr24:33222178-33221957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
109, 60
               

               
Conread position:
               
581-711
               

               
Cow position:
               
chr24:25194030-25194164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
581-765
               

               
Cow position:
               
chr24:18695385-18695572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
95, 68
               

               
Conread position:
               
588-792
               

               
Cow position:
               
chr24:28327312-28327106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
100, 51
               

               
Conread position:
               
588-799
               

               
Cow position:
               
chr24:18771416-18771205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
102, 57
               

               
Conread position:
               
590-757
               

               
Cow position:
               
chr24:24457474-24457305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
33, 139
               

               
Conread position:
               
602-753
               

               
Cow position:
               
chr24:15373194-15373347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 113
               

               
Conread position:
               
604-904
               

               
Cow position:
               
chr24:29708017-29707706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 154
               

               
Conread position:
               
606-753
               

               
Cow position:
               
chr24:5909-5756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
609-799
               

               
Cow position:
               
chr24:352813-352626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 117
               
Show alignments to all cow chromosomes.