Cow genome map

Conread name: Ss1.1-Pig4-TMW8039N11.3

Conread position: 14-222
Cow position: chrX:28873043-28872835 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 97

Conread position: 14-271
Cow position: chrX:30140826-30140575 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 6

Conread position: 15-390
Cow position: chrX:6250453-6250065 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 224

Conread position: 16-386
Cow position: chrX:18534461-18534833 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 246
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 90, 16

Conread position: 18-394
Cow position: chrX:40246892-40246504 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 257
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 191, 29

Conread position: 24-383
Cow position: chrX:6282755-6282388 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 250
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 120

Conread position: 25-392
Cow position: chrX:10417314-10416924 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 258

Conread position: 25-394
Cow position: chrX:13417424-13417054 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 254
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 184, 60

Conread position: 25-394
Cow position: chrX:29779498-29779123 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 263
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 74, 45

Conread position: 25-394
Cow position: chrX:41888959-41888616 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 252
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 62, 0

Conread position: 26-211
Cow position: chrX:29814847-29815030 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 66

Conread position: 26-284
Cow position: chrX:27078984-27079244 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 177
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 114

Conread position: 31-307
Cow position: chrX:2012651-2012389 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 194
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 56

Conread position: 31-389
Cow position: chrX:22130254-22129873 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 247
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 47, 23

Conread position: 32-388
Cow position: chrX:44387121-44387492 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 248
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 15, 54

Conread position: 44-390
Cow position: chrX:26427632-26427279 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 240
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 169, 56

Conread position: 62-390
Cow position: chrX:22610970-22611312 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 140, 0

Conread position: 77-382
Cow position: chrX:29285482-29285804 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 215
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 80-388
Cow position: chrX:30183844-30183523 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 221
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 142, 30

Conread position: 81-388
Cow position: chrX:23277071-23277387 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 219
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 132, 38

Conread position: 83-388
Cow position: chrX:13413086-13412768 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 130, 36

Conread position: 84-387
Cow position: chrX:26767144-26766829 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 129, 25

Conread position: 88-281
Cow position: chrX:18954467-18954275 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 22

Conread position: 88-382
Cow position: chrX:23391541-23391234 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 206
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 125, 22

Conread position: 88-388
Cow position: chrX:2482580-2482265 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 212
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 125, 47

Conread position: 88-388
Cow position: chrX:15127184-15126872 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 125, 22

Conread position: 88-388
Cow position: chrX:16699358-16699671 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 211
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 125, 22

Conread position: 88-388
Cow position: chrX:21222986-21223292 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 22

Conread position: 88-388
Cow position: chrX:23041065-23040758 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 214
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 125, 22

Conread position: 88-388
Cow position: chrX:26758547-26758236 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 209
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 123, 21

Conread position: 88-388
Cow position: chrX:29096259-29096572 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 132, 22

Conread position: 88-388
Cow position: chrX:29853511-29853198 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 215
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 125, 22

Conread position: 93-310
Cow position: chrX:5299162-5298945 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 125, 38

Conread position: 93-393
Cow position: chrX:21829585-21829900 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 207
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 27, 43

Conread position: 100-390
Cow position: chrX:5336430-5336120 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 215
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 43, 120

Conread position: 100-390
Cow position: chrX:16812537-16812229 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 48, 10

Conread position: 103-390
Cow position: chrX:7481697-7481998 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 210
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 14

Conread position: 110-390
Cow position: chrX:2604119-2604414 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 195
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 116-390
Cow position: chrX:30011116-30011405 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 196
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 97, 0

Conread position: 117-388
Cow position: chrX:39563853-39563569 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 96, 265

Conread position: 117-389
Cow position: chrX:37849093-37849378 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 9, 15

Conread position: 117-390
Cow position: chrX:12654682-12654396 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 96, 0

Conread position: 117-390
Cow position: chrX:13398042-13397754 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 117-390
Cow position: chrX:22619230-22618942 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 89, 175

Conread position: 117-390
Cow position: chrX:30173593-30173305 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 0

Conread position: 117-392
Cow position: chrX:16363046-16362756 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 203
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 96, 0

Conread position: 117-393
Cow position: chrX:31493498-31493789 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 92, 0

Conread position: 117-393
Cow position: chrX:37812240-37812530 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 96, 42

Conread position: 128-387
Cow position: chrX:1942653-1942382 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 15

Conread position: 131-310
Cow position: chrX:11433793-11433973 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 125

Conread position: 131-344
Cow position: chrX:8454844-8455056 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 82, 192

Conread position: 131-390
Cow position: chrX:12353332-12353606 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 131-390
Cow position: chrX:30055643-30055369 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 82, 0

Conread position: 132-395
Cow position: chrX:21490290-21490568 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 79, 124

Conread position: 137-386
Cow position: chrX:1547078-1547343 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 10, 0

Conread position: 156-388
Cow position: chrX:20720107-20720354 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 158-312
Cow position: chrX:5833312-5833157 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 158-388
Cow position: chrX:970894-971139 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 159-310
Cow position: chrX:17478402-17478250 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 159-382
Cow position: chrX:15980830-15980592 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 159-387
Cow position: chrX:3421065-3420827 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 47, 96

Conread position: 159-387
Cow position: chrX:7093718-7093961 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 178
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 97

Conread position: 159-388
Cow position: chrX:16237903-16238147 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 159-390
Cow position: chrX:2562737-2562491 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 159-390
Cow position: chrX:12280150-12279904 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 54, 0

Conread position: 159-390
Cow position: chrX:12288274-12288037 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 162
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 159-390
Cow position: chrX:12803744-12803499 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 173
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 203

Conread position: 159-390
Cow position: chrX:14594891-14595137 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 159-390
Cow position: chrX:18219517-18219763 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 159-390
Cow position: chrX:20359931-20359685 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 97

Conread position: 159-390
Cow position: chrX:35529982-35530228 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 174
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 159-391
Cow position: chrX:12343076-12343321 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 175
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 54, 111

Conread position: 159-391
Cow position: chrX:27426200-27425953 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 179
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 54, 0

Conread position: 159-393
Cow position: chrX:2101979-2102227 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 54, 117

Conread position: 159-393
Cow position: chrX:8479769-8480019 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 179
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 54, 98

Conread position: 159-393
Cow position: chrX:18659662-18659413 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 159-394
Cow position: chrX:11149197-11148963 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 54, 146

Conread position: 159-418
Cow position: chrX:20315935-20315668 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 153, 57

Conread position: 160-390
Cow position: chrX:9008459-9008704 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 169
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 160-390
Cow position: chrX:10531437-10531192 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 55, 0

Conread position: 164-393
Cow position: chrX:29911300-29911056 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 171
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 375-637
Cow position: chrX:44387586-44387856 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 149

Conread position: 378-530
Cow position: chrX:41198696-41198843 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 389-573
Cow position: chrX:22866899-22866720 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 162, 13

Conread position: 390-523
Cow position: chrX:40035849-40035721 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 390-723
Cow position: chrX:12179589-12179924 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 232
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 135, 31

Conread position: 392-680
Cow position: chrX:27019832-27020108 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 129, 34

Conread position: 394-523
Cow position: chrX:23969983-23970108 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 394-529
Cow position: chrX:11412162-11412031 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 394-596
Cow position: chrX:30093739-30093544 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 394-637
Cow position: chrX:22600791-22600546 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 131, 27

Conread position: 394-637
Cow position: chrX:30141700-30141454 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 131, 28

Conread position: 394-668
Cow position: chrX:41433794-41433521 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 188
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 133, 28

Conread position: 394-685
Cow position: chrX:40515525-40515813 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 196
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 154, 52

Conread position: 394-729
Cow position: chrX:4123461-4123802 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 34

Conread position: 394-732
Cow position: chrX:1947096-1946744 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 131, 44

Conread position: 394-747
Cow position: chrX:13648159-13647801 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 28

Conread position: 394-757
Cow position: chrX:41743538-41743907 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 35

Conread position: 394-774
Cow position: chrX:20582655-20583032 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 28

Conread position: 394-795
Cow position: chrX:34192306-34192698 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 278
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 127, 46

Conread position: 395-529
Cow position: chrX:41884811-41884681 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 395-783
Cow position: chrX:48248445-48248846 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 276
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 52, 23

Conread position: 396-681
Cow position: chrX:46448207-46447913 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 116

Conread position: 396-751
Cow position: chrX:12309761-12309397 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 26

Conread position: 396-799
Cow position: chrX:31250019-31250419 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 26

Conread position: 396-799
Cow position: chrX:36250235-36249830 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 21

Conread position: 397-680
Cow position: chrX:40142572-40142283 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 30, 172

Conread position: 397-686
Cow position: chrX:13069116-13068817 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 201
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 198

Conread position: 397-732
Cow position: chrX:31261009-31260660 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 318

Conread position: 397-757
Cow position: chrX:34564928-34565276 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 335, 29

Conread position: 397-762
Cow position: chrX:47343920-47344294 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 25

Conread position: 399-521
Cow position: chrX:21662726-21662843 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 399-523
Cow position: chrX:2146942-2147068 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 399-523
Cow position: chrX:11455439-11455319 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 399-523
Cow position: chrX:12980717-12980597 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 399-525
Cow position: chrX:6262800-6262679 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 399-526
Cow position: chrX:16542076-16541953 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 399-530
Cow position: chrX:35847845-35847972 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 399-531
Cow position: chrX:20167784-20167915 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 122, 23

Conread position: 399-538
Cow position: chrX:32419819-32419954 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 399-547
Cow position: chrX:4750743-4750602 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 399-550
Cow position: chrX:19842252-19842106 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 0

Conread position: 399-550
Cow position: chrX:37572794-37572944 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 128, 29

Conread position: 399-551
Cow position: chrX:23341367-23341216 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 126, 22

Conread position: 399-565
Cow position: chrX:3130194-3130357 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 123, 23

Conread position: 399-572
Cow position: chrX:38852789-38852962 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 150, 23

Conread position: 399-579
Cow position: chrX:34222379-34222558 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 122, 18

Conread position: 399-590
Cow position: chrX:6406975-6407163 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 92, 18

Conread position: 399-594
Cow position: chrX:27117597-27117790 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 27

Conread position: 399-598
Cow position: chrX:47654934-47655132 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 122, 39

Conread position: 399-604
Cow position: chrX:525306-525514 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 122, 22

Conread position: 399-604
Cow position: chrX:24788086-24787883 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 126, 23

Conread position: 399-607
Cow position: chrX:42221938-42221732 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 124, 30

Conread position: 399-628
Cow position: chrX:17691891-17692122 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 124, 22

Conread position: 399-629
Cow position: chrX:12096616-12096385 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 122, 23

Conread position: 399-631
Cow position: chrX:2351692-2351927 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 181
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 122, 30

Conread position: 399-632
Cow position: chrX:21495388-21495624 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 126, 35

Conread position: 399-632
Cow position: chrX:26754999-26754766 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 150, 22

Conread position: 399-635
Cow position: chrX:21862040-21861801 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 122, 23

Conread position: 399-637
Cow position: chrX:3570081-3570322 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 126, 22

Conread position: 399-637
Cow position: chrX:22115652-22115411 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 30

Conread position: 399-637
Cow position: chrX:27616468-27616705 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 170
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 126, 22

Conread position: 399-637
Cow position: chrX:41846904-41846663 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 122, 23

Conread position: 399-652
Cow position: chrX:15718047-15717795 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 22

Conread position: 399-656
Cow position: chrX:9898712-9898454 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 126, 22

Conread position: 399-668
Cow position: chrX:19771987-19771729 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 223, 38

Conread position: 399-673
Cow position: chrX:32871156-32870876 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 122, 33

Conread position: 399-675
Cow position: chrX:10415895-10415618 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 194
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 122, 23

Conread position: 399-675
Cow position: chrX:23316790-23316508 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 196
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 160, 23

Conread position: 399-679
Cow position: chrX:6906193-6905902 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 28, 184

Conread position: 399-679
Cow position: chrX:47362256-47361969 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 122, 39

Conread position: 399-680
Cow position: chrX:3405726-3405449 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 196
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 121, 39

Conread position: 399-680
Cow position: chrX:14908641-14908932 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 200
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 26, 78

Conread position: 399-680
Cow position: chrX:19290402-19290680 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 196
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 121, 22

Conread position: 399-680
Cow position: chrX:24826963-24827245 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 27, 135

Conread position: 399-680
Cow position: chrX:29864801-29864511 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 122, 23

Conread position: 399-680
Cow position: chrX:30919770-30919474 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 29, 17

Conread position: 399-680
Cow position: chrX:35633129-35632838 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 207
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 399-680
Cow position: chrX:42508014-42507732 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 30

Conread position: 399-692
Cow position: chrX:42086492-42086790 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 38

Conread position: 399-693
Cow position: chrX:20504391-20504684 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 212
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 27, 79

Conread position: 399-703
Cow position: chrX:16722187-16721866 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 227
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 252

Conread position: 399-709
Cow position: chrX:11082984-11082670 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 23

Conread position: 399-709
Cow position: chrX:21227104-21227419 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 227
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 126, 22

Conread position: 399-710
Cow position: chrX:11819989-11820301 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 122, 22

Conread position: 399-711
Cow position: chrX:35268523-35268828 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 231
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 122, 30

Conread position: 399-711
Cow position: chrX:38151318-38151640 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 227
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 126, 22

Conread position: 399-712
Cow position: chrX:24317696-24318012 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 122, 38

Conread position: 399-713
Cow position: chrX:15596675-15596992 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 159, 23

Conread position: 399-719
Cow position: chrX:23583188-23583516 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 237
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 121, 23

Conread position: 399-719
Cow position: chrX:40648296-40648607 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 229
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 150, 23

Conread position: 399-719
Cow position: chrX:45967791-45968114 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 230
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 137, 23

Conread position: 399-721
Cow position: chrX:42470307-42469986 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 23

Conread position: 399-723
Cow position: chrX:1550580-1550913 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 231
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 126, 22

Conread position: 399-723
Cow position: chrX:3154625-3154285 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 227
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 31, 177

Conread position: 399-723
Cow position: chrX:36840491-36840834 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 28, 0

Conread position: 399-723
Cow position: chrX:45399868-45399533 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 224
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 23

Conread position: 399-723
Cow position: chrX:48370725-48371055 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 237
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 121, 22

Conread position: 399-724
Cow position: chrX:1331563-1331899 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 126, 23

Conread position: 399-724
Cow position: chrX:2945239-2944904 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 46, 22

Conread position: 399-724
Cow position: chrX:3649178-3648855 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 123, 22

Conread position: 399-724
Cow position: chrX:16078298-16078623 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 126, 23

Conread position: 399-724
Cow position: chrX:25946212-25945873 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 63, 23

Conread position: 399-724
Cow position: chrX:45113266-45113578 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 30

Conread position: 399-732
Cow position: chrX:6543886-6544222 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 23

Conread position: 399-732
Cow position: chrX:10866237-10865900 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 23

Conread position: 399-732
Cow position: chrX:15485995-15485657 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 30

Conread position: 399-732
Cow position: chrX:18244619-18244957 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 230
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 121, 22

Conread position: 399-732
Cow position: chrX:20801401-20801742 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 27, 185

Conread position: 399-732
Cow position: chrX:21665961-21665625 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 30

Conread position: 399-732
Cow position: chrX:22821044-22821386 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 240
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 126, 23

Conread position: 399-732
Cow position: chrX:23386909-23386575 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 229
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 121, 39

Conread position: 399-732
Cow position: chrX:23396236-23396570 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 229
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 121, 39

Conread position: 399-732
Cow position: chrX:25035756-25035412 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 114, 23

Conread position: 399-732
Cow position: chrX:25452180-25452514 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 126, 35

Conread position: 399-732
Cow position: chrX:26531588-26531930 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 126, 17

Conread position: 399-732
Cow position: chrX:27105888-27106230 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 242
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 122, 23

Conread position: 399-732
Cow position: chrX:27442922-27442588 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 17

Conread position: 399-732
Cow position: chrX:28105556-28105887 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 236
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 126, 30

Conread position: 399-732
Cow position: chrX:31202470-31202812 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 128, 22

Conread position: 399-732
Cow position: chrX:32188729-32188391 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 125, 23

Conread position: 399-732
Cow position: chrX:38967281-38967615 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 30

Conread position: 399-732
Cow position: chrX:41879300-41878965 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 38

Conread position: 399-732
Cow position: chrX:42462118-42461777 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 23

Conread position: 399-732
Cow position: chrX:44054434-44054774 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 32

Conread position: 399-734
Cow position: chrX:18898021-18897682 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 237
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 126, 22

Conread position: 399-734
Cow position: chrX:25575589-25575932 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 227
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 126, 40

Conread position: 399-734
Cow position: chrX:29780375-29780714 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 236
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 124, 22

Conread position: 399-735
Cow position: chrX:21749828-21749495 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 239
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 122, 22

Conread position: 399-737
Cow position: chrX:39546349-39546002 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 232
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 27, 179

Conread position: 399-740
Cow position: chrX:30454992-30454639 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 243
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 126, 22

Conread position: 399-743
Cow position: chrX:28111124-28111487 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 124, 17

Conread position: 399-745
Cow position: chrX:39556186-39555854 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 23

Conread position: 399-747
Cow position: chrX:1810529-1810178 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 16

Conread position: 399-747
Cow position: chrX:42171669-42171311 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 43

Conread position: 399-748
Cow position: chrX:46532890-46532515 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 29

Conread position: 399-752
Cow position: chrX:15147551-15147198 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 23

Conread position: 399-753
Cow position: chrX:7277560-7277904 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 17

Conread position: 399-753
Cow position: chrX:35388277-35387911 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 23

Conread position: 399-756
Cow position: chrX:15007521-15007155 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 30

Conread position: 399-757
Cow position: chrX:917746-917370 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 175

Conread position: 399-757
Cow position: chrX:27446321-27446691 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 39

Conread position: 399-757
Cow position: chrX:37489348-37489718 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 264
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 109, 30

Conread position: 399-758
Cow position: chrX:17497726-17498079 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 23

Conread position: 399-758
Cow position: chrX:47379837-47379472 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 265
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 132, 39

Conread position: 399-762
Cow position: chrX:7571533-7571904 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 34

Conread position: 399-762
Cow position: chrX:7718482-7718854 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 253

Conread position: 399-762
Cow position: chrX:13868327-13868703 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 27

Conread position: 399-762
Cow position: chrX:34376584-34376948 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 262
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 65, 30

Conread position: 399-762
Cow position: chrX:42994244-42994613 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 30

Conread position: 399-762
Cow position: chrX:45501778-45502146 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 256
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 126, 30

Conread position: 399-764
Cow position: chrX:15329283-15329649 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 260
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 124, 23

Conread position: 399-765
Cow position: chrX:21592916-21593291 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 27

Conread position: 399-767
Cow position: chrX:19019462-19019100 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 29

Conread position: 399-769
Cow position: chrX:8796881-8797261 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 23

Conread position: 399-769
Cow position: chrX:38963741-38964113 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 18

Conread position: 399-771
Cow position: chrX:38227460-38227084 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 35

Conread position: 399-793
Cow position: chrX:878740-878355 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 271
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 92, 32

Conread position: 399-793
Cow position: chrX:22812692-22813093 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 23

Conread position: 399-793
Cow position: chrX:35223932-35224321 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 399-793
Cow position: chrX:38218348-38218739 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 35

Conread position: 399-799
Cow position: chrX:161058-161443 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 29

Conread position: 399-799
Cow position: chrX:14599166-14599568 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 23

Conread position: 399-799
Cow position: chrX:40481241-40480838 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 30

Conread position: 399-799
Cow position: chrX:41790807-41790412 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 126, 26

Conread position: 399-800
Cow position: chrX:1055763-1055349 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 27

Conread position: 399-800
Cow position: chrX:11844608-11844209 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 38

Conread position: 399-800
Cow position: chrX:24105257-24105656 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 23

Conread position: 399-805
Cow position: chrX:31729088-31729478 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 23

Conread position: 399-805
Cow position: chrX:31949300-31948899 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 23

Conread position: 399-807
Cow position: chrX:32743168-32743576 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 282
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 126, 30

Conread position: 399-807
Cow position: chrX:40827117-40826713 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 295
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 122, 27

Conread position: 400-518
Cow position: chrX:40184004-40183890 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 400-578
Cow position: chrX:17892174-17892355 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 121, 26

Conread position: 400-637
Cow position: chrX:10718141-10718380 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 121, 16

Conread position: 400-679
Cow position: chrX:48205286-48204995 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 17

Conread position: 400-723
Cow position: chrX:19022678-19022346 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 224
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 120, 16

Conread position: 400-723
Cow position: chrX:48227994-48227650 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 252

Conread position: 400-746
Cow position: chrX:44737360-44737001 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 256
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 118, 22

Conread position: 400-758
Cow position: chrX:27705224-27705582 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 22

Conread position: 400-771
Cow position: chrX:35288285-35288663 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 244
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 31, 113

Conread position: 400-782
Cow position: chrX:3653396-3653779 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 33

Conread position: 400-793
Cow position: chrX:38439107-38439506 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 14

Conread position: 400-800
Cow position: chrX:23564166-23563759 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 37

Conread position: 401-530
Cow position: chrX:11855801-11855926 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 401-531
Cow position: chrX:25816623-25816497 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 401-678
Cow position: chrX:33803389-33803097 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 44, 88

Conread position: 401-723
Cow position: chrX:12290369-12290688 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 234
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 127, 26

Conread position: 401-761
Cow position: chrX:5871945-5872318 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 21

Conread position: 402-551
Cow position: chrX:12008049-12007901 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 19

Conread position: 402-564
Cow position: chrX:40224610-40224445 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 14

Conread position: 402-632
Cow position: chrX:5640986-5640767 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 172
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 402-673
Cow position: chrX:43218024-43218297 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 189
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 126, 20

Conread position: 402-678
Cow position: chrX:41192322-41192598 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 20

Conread position: 402-679
Cow position: chrX:30863566-30863282 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 200
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 118, 14

Conread position: 402-679
Cow position: chrX:39174580-39174301 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 123, 19

Conread position: 402-679
Cow position: chrX:48490251-48489967 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 141, 26

Conread position: 402-680
Cow position: chrX:48224553-48224271 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 195
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 107, 20

Conread position: 402-719
Cow position: chrX:45430386-45430062 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 228
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 118, 25

Conread position: 402-724
Cow position: chrX:14884329-14883999 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 20

Conread position: 402-728
Cow position: chrX:22578527-22578194 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 226
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 150, 14

Conread position: 402-732
Cow position: chrX:15590239-15589903 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 225
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 123, 36

Conread position: 402-765
Cow position: chrX:48243819-48243462 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 243
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 29

Conread position: 403-637
Cow position: chrX:3361453-3361689 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 117, 13

Conread position: 403-734
Cow position: chrX:16465934-16466274 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 227
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 117, 13

Conread position: 403-793
Cow position: chrX:26626055-26625646 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 321

Conread position: 405-529
Cow position: chrX:36975480-36975600 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 405-550
Cow position: chrX:22603803-22603659 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 116, 11

Conread position: 405-570
Cow position: chrX:35025437-35025605 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 33

Conread position: 405-632
Cow position: chrX:28513708-28513937 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 116, 11

Conread position: 405-637
Cow position: chrX:22568381-22568148 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 11

Conread position: 405-637
Cow position: chrX:30837009-30837244 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 115, 11

Conread position: 405-656
Cow position: chrX:39386629-39386377 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 122, 33

Conread position: 405-679
Cow position: chrX:3464440-3464161 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 197
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 115, 11

Conread position: 405-679
Cow position: chrX:5334183-5333904 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 115, 11

Conread position: 405-679
Cow position: chrX:11715826-11715545 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 115, 11

Conread position: 405-679
Cow position: chrX:36195728-36196009 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 115, 16

Conread position: 405-679
Cow position: chrX:43511052-43511336 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 60, 11

Conread position: 405-680
Cow position: chrX:31058796-31059060 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 21

Conread position: 405-701
Cow position: chrX:28646347-28646046 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 116, 17

Conread position: 405-720
Cow position: chrX:33763980-33764304 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 229
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 115, 11

Conread position: 405-723
Cow position: chrX:1576627-1576300 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 220
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 115, 11

Conread position: 405-723
Cow position: chrX:25276863-25276536 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 227
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 115, 11

Conread position: 405-723
Cow position: chrX:34519362-34519689 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 223
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 115, 11

Conread position: 405-726
Cow position: chrX:11581573-11581906 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 24

Conread position: 405-732
Cow position: chrX:7695400-7695710 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 244
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 120, 17

Conread position: 405-732
Cow position: chrX:41103424-41103758 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 120, 10

Conread position: 405-733
Cow position: chrX:45043194-45043528 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 222
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 131, 24

Conread position: 405-734
Cow position: chrX:5320084-5319743 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 115, 11

Conread position: 405-734
Cow position: chrX:20321131-20320795 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 117, 11

Conread position: 405-734
Cow position: chrX:32010667-32011004 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 234
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 115, 11

Conread position: 405-734
Cow position: chrX:45237102-45237439 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 227
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 115, 16

Conread position: 405-737
Cow position: chrX:6493368-6493707 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 241
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 120, 16

Conread position: 405-742
Cow position: chrX:37816224-37816569 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 232
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 113, 11

Conread position: 405-753
Cow position: chrX:31489148-31489509 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 18

Conread position: 406-637
Cow position: chrX:21344031-21344265 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 114, 10

Conread position: 406-661
Cow position: chrX:41304107-41303847 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 25, 118

Conread position: 406-711
Cow position: chrX:27498404-27498719 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 119, 15

Conread position: 406-723
Cow position: chrX:18656168-18655842 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 116, 10

Conread position: 406-734
Cow position: chrX:6372818-6373153 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 225
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 114, 10

Conread position: 406-734
Cow position: chrX:16359372-16359042 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 222
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 114, 15

Conread position: 406-734
Cow position: chrX:43979255-43979593 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 112, 10

Conread position: 406-757
Cow position: chrX:29289213-29289575 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 20

Conread position: 407-680
Cow position: chrX:4630056-4629771 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 191
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 117, 39

Conread position: 407-681
Cow position: chrX:5127555-5127832 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 75

Conread position: 407-732
Cow position: chrX:48247195-48246883 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 226
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 116, 33

Conread position: 408-679
Cow position: chrX:29877550-29877264 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 408-732
Cow position: chrX:25419527-25419190 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 23, 157

Conread position: 417-543
Cow position: chrX:30825290-30825421 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 417-545
Cow position: chrX:17010660-17010527 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 417-546
Cow position: chrX:39757675-39757809 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 417-561
Cow position: chrX:34006955-34007108 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 417-564
Cow position: chrX:2715264-2715420 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 417-565
Cow position: chrX:14009011-14008854 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 417-565
Cow position: chrX:16222268-16222424 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 60

Conread position: 417-565
Cow position: chrX:19399420-19399577 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 417-565
Cow position: chrX:24975579-24975736 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 417-565
Cow position: chrX:28314067-28314224 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 417-565
Cow position: chrX:39185815-39185972 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 417-625
Cow position: chrX:2485989-2485772 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 417-628
Cow position: chrX:24467483-24467263 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 417-632
Cow position: chrX:7097100-7097323 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 119

Conread position: 417-632
Cow position: chrX:18451437-18451213 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-632
Cow position: chrX:24320630-24320410 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 206

Conread position: 417-632
Cow position: chrX:26617279-26617055 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 417-632
Cow position: chrX:28588612-28588836 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 417-632
Cow position: chrX:30052827-30052603 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 417-637
Cow position: chrX:6454337-6454566 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-637
Cow position: chrX:6828777-6829007 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 417-637
Cow position: chrX:10992260-10992489 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-637
Cow position: chrX:15620890-15620661 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-637
Cow position: chrX:16853747-16853518 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 168
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 157

Conread position: 417-637
Cow position: chrX:26506299-26506073 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 101

Conread position: 417-637
Cow position: chrX:27760982-27761211 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 156
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 417-637
Cow position: chrX:46297302-46297531 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 417-643
Cow position: chrX:23135219-23135449 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 132, 0

Conread position: 417-675
Cow position: chrX:5306241-5306512 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 184
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-675
Cow position: chrX:13396610-13396339 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 417-675
Cow position: chrX:14134823-14135094 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 417-675
Cow position: chrX:30199350-30199079 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 417-675
Cow position: chrX:34413418-34413689 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 417-675
Cow position: chrX:37403381-37403109 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 417-675
Cow position: chrX:39698970-39699237 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 185
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 103, 0

Conread position: 417-678
Cow position: chrX:5406700-5406971 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 183
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 157

Conread position: 417-679
Cow position: chrX:361811-361536 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:1975955-1975680 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:2417842-2417567 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 417-679
Cow position: chrX:2664651-2664926 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:3078945-3078671 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 195

Conread position: 417-679
Cow position: chrX:3157260-3157535 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:3387748-3388023 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:5112914-5112639 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 219

Conread position: 417-679
Cow position: chrX:5599336-5599061 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:5646462-5646187 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:5892870-5893145 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:6196112-6195837 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:6652430-6652155 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:7311635-7311910 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 23, 0

Conread position: 417-679
Cow position: chrX:7486506-7486781 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:9128698-9128973 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:10444773-10444497 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:10495875-10496150 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:10922929-10922654 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:10932314-10932589 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 417-679
Cow position: chrX:11566556-11566831 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:12001505-12001230 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:12360530-12360806 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:13070959-13070685 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 65

Conread position: 417-679
Cow position: chrX:13091519-13091245 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 65

Conread position: 417-679
Cow position: chrX:14458525-14458256 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 28, 258

Conread position: 417-679
Cow position: chrX:15346327-15346052 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:15504933-15505208 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 191
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 168

Conread position: 417-679
Cow position: chrX:15561173-15560897 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 192
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 177

Conread position: 417-679
Cow position: chrX:15781223-15781498 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:16046790-16047066 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:16735166-16735441 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 243

Conread position: 417-679
Cow position: chrX:17783141-17783416 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 219

Conread position: 417-679
Cow position: chrX:17995101-17995376 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:18462333-18462058 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:19495318-19495043 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:19674290-19674565 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 417-679
Cow position: chrX:20098964-20099239 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:21768446-21768721 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 417-679
Cow position: chrX:22608950-22608675 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 0

Conread position: 417-679
Cow position: chrX:22888300-22888576 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 192
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:23109404-23109676 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 89

Conread position: 417-679
Cow position: chrX:23235472-23235747 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:24447443-24447718 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:24509509-24509784 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:24735585-24735855 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 18, 50

Conread position: 417-679
Cow position: chrX:24969174-24968899 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 219

Conread position: 417-679
Cow position: chrX:26759926-26759652 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 218

Conread position: 417-679
Cow position: chrX:26974552-26974827 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 417-679
Cow position: chrX:27626997-27627272 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:28024905-28025178 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 204

Conread position: 417-679
Cow position: chrX:28058153-28057878 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:28555793-28555518 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:28559193-28558918 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 186
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:29760341-29760616 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:30196939-30197214 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:30538510-30538235 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:30752416-30752691 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:30965743-30966018 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:31605326-31605601 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:32331273-32331544 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:34095203-34095478 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 193
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:34761708-34761983 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:36240037-36240312 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:36479574-36479849 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:36535093-36534818 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:37061149-37060874 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:37497805-37497530 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:37772792-37772516 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 187
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 23, 0

Conread position: 417-679
Cow position: chrX:37852781-37853048 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 178
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 98

Conread position: 417-679
Cow position: chrX:38442604-38442879 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:39548972-39549247 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 417-679
Cow position: chrX:39560010-39559736 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 417-679
Cow position: chrX:44851733-44852011 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 55

Conread position: 417-679
Cow position: chrX:45263426-45263152 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 184
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 417-679
Cow position: chrX:48328745-48328470 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 417-680
Cow position: chrX:23139955-23140228 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 89

Conread position: 417-688
Cow position: chrX:48423577-48423847 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 183
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 20, 157

Conread position: 417-706
Cow position: chrX:45467578-45467273 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 203
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 417-708
Cow position: chrX:29777684-29777989 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 209
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 417-711
Cow position: chrX:36730026-36730337 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 291

Conread position: 417-720
Cow position: chrX:28518081-28517765 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 208
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 66

Conread position: 417-721
Cow position: chrX:29169694-29169373 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 0

Conread position: 417-722
Cow position: chrX:671367-671047 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 219
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 417-722
Cow position: chrX:19109399-19109079 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:1781547-1781869 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 290

Conread position: 417-723
Cow position: chrX:2274559-2274880 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 212
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:2362141-2362462 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 220
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 289

Conread position: 417-723
Cow position: chrX:4622312-4621991 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:5280211-5279891 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 217

Conread position: 417-723
Cow position: chrX:5289045-5288724 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 0

Conread position: 417-723
Cow position: chrX:5423424-5423103 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 210
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:6558492-6558813 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 214
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 270

Conread position: 417-723
Cow position: chrX:6566716-6567037 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:7444726-7445046 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 211
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:7509779-7510099 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 217
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:9018661-9018340 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 289

Conread position: 417-723
Cow position: chrX:9168972-9168651 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:10351503-10351824 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:11358423-11358102 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 229
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 20, 289

Conread position: 417-723
Cow position: chrX:11663820-11664141 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 289

Conread position: 417-723
Cow position: chrX:11672423-11672744 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 417-723
Cow position: chrX:12145737-12146057 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 120

Conread position: 417-723
Cow position: chrX:12776344-12776024 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 253

Conread position: 417-723
Cow position: chrX:13447912-13448233 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 289

Conread position: 417-723
Cow position: chrX:14409745-14409424 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 217
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 289

Conread position: 417-723
Cow position: chrX:14781703-14781382 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 207
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 417-723
Cow position: chrX:15172885-15172570 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 203
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 20, 98

Conread position: 417-723
Cow position: chrX:15259977-15259656 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 216
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 219

Conread position: 417-723
Cow position: chrX:15531510-15531192 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 103, 25

Conread position: 417-723
Cow position: chrX:16285853-16286172 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 217

Conread position: 417-723
Cow position: chrX:18223055-18223375 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 216
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 167

Conread position: 417-723
Cow position: chrX:19774838-19774517 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 289

Conread position: 417-723
Cow position: chrX:20032189-20031872 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 207
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:22613028-22613349 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:23047422-23047741 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 221
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 287

Conread position: 417-723
Cow position: chrX:24413672-24413993 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 209
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:24769218-24768901 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 164

Conread position: 417-723
Cow position: chrX:27422639-27422319 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 167

Conread position: 417-723
Cow position: chrX:27997292-27997609 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 151

Conread position: 417-723
Cow position: chrX:30172068-30171747 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:30822226-30822547 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:30899746-30899424 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 290

Conread position: 417-723
Cow position: chrX:32039201-32038880 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 218
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 0

Conread position: 417-723
Cow position: chrX:35612902-35612582 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 123

Conread position: 417-723
Cow position: chrX:37764555-37764234 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:38014736-38015057 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:41488523-41488202 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:42120945-42121266 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 211
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:42459814-42460143 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 214
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 417-723
Cow position: chrX:44557721-44558042 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 215
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 417-723
Cow position: chrX:46579213-46578892 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 295

Conread position: 417-724
Cow position: chrX:20878120-20877799 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 221
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 19, 156

Conread position: 417-733
Cow position: chrX:30950170-30950499 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 193
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 417-733
Cow position: chrX:47386289-47385960 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 216
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 15, 156

Conread position: 417-734
Cow position: chrX:2160407-2160738 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 321

Conread position: 417-734
Cow position: chrX:4343391-4343722 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 323

Conread position: 417-734
Cow position: chrX:5739571-5739240 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 218
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 20, 323

Conread position: 417-734
Cow position: chrX:8434561-8434234 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 213
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 103, 19

Conread position: 417-734
Cow position: chrX:8782386-8782717 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 218
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 20, 157

Conread position: 417-734
Cow position: chrX:14122109-14121779 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 221
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 20, 38

Conread position: 417-734
Cow position: chrX:14134117-14134448 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 213
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 323

Conread position: 417-734
Cow position: chrX:15439007-15438680 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 223
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 24, 215

Conread position: 417-734
Cow position: chrX:15577999-15577668 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 218
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 23, 219

Conread position: 417-734
Cow position: chrX:19473519-19473187 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 324

Conread position: 417-734
Cow position: chrX:20617155-20616824 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 292

Conread position: 417-734
Cow position: chrX:22077969-22078300 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 225
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 23, 219

Conread position: 417-734
Cow position: chrX:25741472-25741141 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 323

Conread position: 417-734
Cow position: chrX:26275781-26276112 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 227
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 20, 168

Conread position: 417-734
Cow position: chrX:27305569-27305899 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 27

Conread position: 417-734
Cow position: chrX:29066094-29066410 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 217
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 60

Conread position: 417-734
Cow position: chrX:29903384-29903716 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 223
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 271

Conread position: 417-734
Cow position: chrX:30159369-30159038 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 20, 323

Conread position: 417-734
Cow position: chrX:31814247-31813916 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 222
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 270

Conread position: 417-734
Cow position: chrX:35533493-35533824 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 224
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 323

Conread position: 417-734
Cow position: chrX:36373186-36373533 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 233
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 20, 339

Conread position: 417-734
Cow position: chrX:39714191-39714522 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 226
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 157

Conread position: 417-734
Cow position: chrX:44980395-44980064 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 181

Conread position: 417-734
Cow position: chrX:45903820-45904151 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 323

Conread position: 417-738
Cow position: chrX:8591182-8591522 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 223
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 328

Conread position: 417-742
Cow position: chrX:38230625-38230286 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 323

Conread position: 417-765
Cow position: chrX:37958139-37958505 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 249
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 289

Conread position: 417-775
Cow position: chrX:8530182-8530554 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 243
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 13, 323

Conread position: 417-798
Cow position: chrX:9085691-9085300 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 260
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 20, 323

Conread position: 417-798
Cow position: chrX:13385049-13385442 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 258
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 219

Conread position: 417-798
Cow position: chrX:13686359-13686762 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 239
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 20, 221

Conread position: 417-798
Cow position: chrX:25289037-25288645 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 259
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 323

Conread position: 417-798
Cow position: chrX:29508425-29508811 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 255
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 23, 121

Conread position: 417-798
Cow position: chrX:34285422-34285029 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 261
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 23, 324

Conread position: 417-799
Cow position: chrX:5866788-5867180 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 252
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 218

Conread position: 417-799
Cow position: chrX:48165165-48165558 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 260
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 168

Conread position: 417-809
Cow position: chrX:2151290-2150889 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 266
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 20, 252

Conread position: 417-809
Cow position: chrX:7742815-7742415 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 262
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 20, 323

Conread position: 417-809
Cow position: chrX:27404303-27403900 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 266
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 78

Conread position: 417-809
Cow position: chrX:30981523-30981121 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 260
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 18, 323

Conread position: 417-809
Cow position: chrX:44168668-44168263 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 264
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 20, 324

Conread position: 417-879
Cow position: chrX:9154002-9154479 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 209
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 417-919
Cow position: chrX:17980237-17980749 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 302
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 429

Conread position: 418-679
Cow position: chrX:36820589-36820315 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 418-723
Cow position: chrX:8641431-8641750 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 210
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 0

Conread position: 418-723
Cow position: chrX:39731156-39731476 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 214
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 19, 0

Conread position: 419-680
Cow position: chrX:18990154-18989882 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 28

Conread position: 421-637
Cow position: chrX:5408701-5408926 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 421-637
Cow position: chrX:14598491-14598716 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 421-675
Cow position: chrX:24173520-24173255 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 0

Conread position: 421-679
Cow position: chrX:19196872-19196601 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 421-679
Cow position: chrX:29226122-29226393 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 421-680
Cow position: chrX:39347137-39346868 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 23

Conread position: 421-732
Cow position: chrX:27509370-27509056 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 52

Conread position: 421-734
Cow position: chrX:14801172-14800845 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 215
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 18, 319

Conread position: 421-743
Cow position: chrX:20038572-20038238 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 224
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 248

Conread position: 421-769
Cow position: chrX:151550-151910 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 15

Conread position: 421-798
Cow position: chrX:5123713-5123327 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 255
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 99, 317

Conread position: 422-679
Cow position: chrX:11725618-11725346 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 0

Conread position: 422-711
Cow position: chrX:47170488-47170791 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 195
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 422-717
Cow position: chrX:26883500-26883182 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 95, 296

Conread position: 422-723
Cow position: chrX:24482723-24482410 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 205
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 10, 0

Conread position: 422-729
Cow position: chrX:32584164-32583844 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 216
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 103, 0

Conread position: 422-793
Cow position: chrX:31436129-31436499 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 226

Conread position: 422-798
Cow position: chrX:24758048-24757663 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 249
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 96, 316

Conread position: 423-529
Cow position: chrX:1514775-1514667 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 10

Conread position: 423-680
Cow position: chrX:25302104-25301837 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 189
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 9, 115

Conread position: 423-709
Cow position: chrX:31443169-31442877 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 7

Conread position: 423-732
Cow position: chrX:25337828-25338152 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 228
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 99, 8

Conread position: 423-757
Cow position: chrX:44396670-44397013 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 227
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 89, 120

Conread position: 423-798
Cow position: chrX:35803462-35803854 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 262
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 17, 283

Conread position: 423-798
Cow position: chrX:43767889-43767503 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 255
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 317

Conread position: 424-631
Cow position: chrX:11145686-11145473 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 7

Conread position: 424-632
Cow position: chrX:37079888-37079673 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 96, 0

Conread position: 424-679
Cow position: chrX:7118993-7118727 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 424-679
Cow position: chrX:16529656-16529922 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 101, 159

Conread position: 424-679
Cow position: chrX:24966919-24967186 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 424-711
Cow position: chrX:29048684-29048967 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 200
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 133, 22

Conread position: 424-732
Cow position: chrX:21415739-21416065 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 101, 0

Conread position: 424-732
Cow position: chrX:23024355-23024673 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 218
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 97, 119

Conread position: 424-761
Cow position: chrX:20697952-20697609 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 116

Conread position: 424-766
Cow position: chrX:16790172-16789848 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 238
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 88

Conread position: 424-768
Cow position: chrX:9227333-9226973 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 254
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 100, 295

Conread position: 424-770
Cow position: chrX:34401649-34402006 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 73

Conread position: 425-551
Cow position: chrX:43730540-43730411 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 96, 0

Conread position: 425-648
Cow position: chrX:10915690-10915918 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 96, 221

Conread position: 425-656
Cow position: chrX:24006170-24005941 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 180

Conread position: 425-676
Cow position: chrX:3207910-3207653 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 99, 233

Conread position: 425-678
Cow position: chrX:41049765-41050031 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 425-679
Cow position: chrX:7755553-7755818 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 95, 0

Conread position: 425-717
Cow position: chrX:42585413-42585119 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 213
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 97, 45

Conread position: 425-724
Cow position: chrX:10428192-10428503 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 206
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 96, 86

Conread position: 425-732
Cow position: chrX:3654260-3654575 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 100

Conread position: 425-732
Cow position: chrX:6655614-6655295 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 209
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 100, 17

Conread position: 425-732
Cow position: chrX:15139896-15139578 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 0

Conread position: 425-734
Cow position: chrX:2499688-2499370 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 207
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 95, 147

Conread position: 425-757
Cow position: chrX:10412335-10411991 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 289

Conread position: 425-770
Cow position: chrX:1616399-1616036 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 0

Conread position: 425-770
Cow position: chrX:11674711-11675071 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 6

Conread position: 425-791
Cow position: chrX:6413698-6414070 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 254
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 96, 184

Conread position: 426-571
Cow position: chrX:20954257-20954405 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 426-632
Cow position: chrX:29723103-29723318 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 6, 0

Conread position: 426-680
Cow position: chrX:28516180-28515937 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 126, 12

Conread position: 426-732
Cow position: chrX:23299607-23299926 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 214
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 99, 0

Conread position: 426-770
Cow position: chrX:20340238-20339885 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 250

Conread position: 427-522
Cow position: chrX:13785724-13785629 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 81
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-529
Cow position: chrX:17663258-17663153 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 90
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 427-529
Cow position: chrX:29602393-29602290 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 427-539
Cow position: chrX:4943350-4943237 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 427-546
Cow position: chrX:7573033-7573155 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 427-547
Cow position: chrX:12671833-12671710 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 427-550
Cow position: chrX:13266170-13266044 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 427-550
Cow position: chrX:23091460-23091583 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 427-551
Cow position: chrX:42530253-42530130 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 427-557
Cow position: chrX:18247995-18248125 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 115, 126

Conread position: 427-565
Cow position: chrX:23038343-23038202 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 427-565
Cow position: chrX:28542228-28542083 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 427-565
Cow position: chrX:40321281-40321428 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 427-568
Cow position: chrX:11583489-11583344 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 94, 8

Conread position: 427-591
Cow position: chrX:8325914-8326083 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 94, 144

Conread position: 427-599
Cow position: chrX:11614375-11614554 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 427-604
Cow position: chrX:45945287-45945468 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 122, 0

Conread position: 427-605
Cow position: chrX:36794648-36794833 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 138
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 93, 145

Conread position: 427-625
Cow position: chrX:30338265-30338065 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 44

Conread position: 427-632
Cow position: chrX:9651391-9651180 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 114

Conread position: 427-632
Cow position: chrX:27982491-27982280 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 427-633
Cow position: chrX:26878319-26878532 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 159

Conread position: 427-634
Cow position: chrX:37760521-37760736 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 203

Conread position: 427-635
Cow position: chrX:3808060-3808277 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 427-635
Cow position: chrX:12810774-12810991 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 144

Conread position: 427-637
Cow position: chrX:626390-626174 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 427-637
Cow position: chrX:20957675-20957884 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 56

Conread position: 427-637
Cow position: chrX:24102633-24102850 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 98, 0

Conread position: 427-649
Cow position: chrX:32747312-32747547 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 179
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 98, 0

Conread position: 427-673
Cow position: chrX:40602618-40602867 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 94, 217

Conread position: 427-676
Cow position: chrX:20887990-20887736 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 94, 137

Conread position: 427-677
Cow position: chrX:9252520-9252264 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 104

Conread position: 427-678
Cow position: chrX:22811540-22811801 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 98, 0

Conread position: 427-679
Cow position: chrX:126445-126704 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 186
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 93, 228

Conread position: 427-679
Cow position: chrX:12466149-12466410 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 177
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 98, 192

Conread position: 427-679
Cow position: chrX:29876397-29876157 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 172
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 211, 87

Conread position: 427-679
Cow position: chrX:38140378-38140119 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 174
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 61

Conread position: 427-680
Cow position: chrX:630639-630392 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 196, 31

Conread position: 427-680
Cow position: chrX:3161362-3161100 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 98, 0

Conread position: 427-680
Cow position: chrX:5376023-5376287 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 185
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 98, 145

Conread position: 427-680
Cow position: chrX:7381978-7382237 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 63

Conread position: 427-680
Cow position: chrX:14407796-14407534 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 98, 149

Conread position: 427-680
Cow position: chrX:15120235-15119971 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 181
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 94, 0

Conread position: 427-680
Cow position: chrX:19689869-19690135 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 80, 35

Conread position: 427-680
Cow position: chrX:22873051-22873316 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 186
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 97, 0

Conread position: 427-680
Cow position: chrX:25283486-25283236 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 93

Conread position: 427-680
Cow position: chrX:25848569-25848834 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 94, 0

Conread position: 427-680
Cow position: chrX:27318869-27319134 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 0

Conread position: 427-680
Cow position: chrX:43648090-43647829 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 93, 187

Conread position: 427-681
Cow position: chrX:2737937-2738191 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 102, 10

Conread position: 427-683
Cow position: chrX:2524076-2523808 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 427-686
Cow position: chrX:24280589-24280866 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 98, 207

Conread position: 427-686
Cow position: chrX:31373232-31373486 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 130, 86

Conread position: 427-687
Cow position: chrX:160378-160112 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 197
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 93, 149

Conread position: 427-687
Cow position: chrX:10916408-10916670 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 199
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 94, 193

Conread position: 427-687
Cow position: chrX:12437581-12437331 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 130, 39

Conread position: 427-687
Cow position: chrX:17271634-17271364 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 189
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 95, 15

Conread position: 427-687
Cow position: chrX:20653046-20653320 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 225

Conread position: 427-687
Cow position: chrX:21795150-21795417 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 427-687
Cow position: chrX:37299246-37299521 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 53, 151

Conread position: 427-692
Cow position: chrX:20976406-20976147 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 55, 140

Conread position: 427-693
Cow position: chrX:18293588-18293858 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 42, 97

Conread position: 427-706
Cow position: chrX:28866335-28866058 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 182

Conread position: 427-708
Cow position: chrX:9970584-9970864 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 186
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 118

Conread position: 427-708
Cow position: chrX:13177803-13177522 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 212
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 114, 70

Conread position: 427-708
Cow position: chrX:31449968-31449674 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 202
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 98, 0

Conread position: 427-709
Cow position: chrX:44086958-44087254 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 204
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 98, 0

Conread position: 427-711
Cow position: chrX:5808861-5809143 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 191
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 195, 91

Conread position: 427-711
Cow position: chrX:11949839-11949546 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 212
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 98, 145

Conread position: 427-711
Cow position: chrX:22538300-22538005 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 98, 0

Conread position: 427-711
Cow position: chrX:29848977-29848682 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 98, 145

Conread position: 427-712
Cow position: chrX:32978603-32978310 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 189

Conread position: 427-719
Cow position: chrX:4996269-4996554 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 208
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 122, 86

Conread position: 427-721
Cow position: chrX:37843374-37843679 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 427-722
Cow position: chrX:21255691-21255996 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 98, 272

Conread position: 427-723
Cow position: chrX:2559306-2559001 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 204
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 153

Conread position: 427-723
Cow position: chrX:7806032-7806338 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 94, 78

Conread position: 427-723
Cow position: chrX:10301999-10302295 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 201
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 122, 15

Conread position: 427-723
Cow position: chrX:17794649-17794941 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 102

Conread position: 427-723
Cow position: chrX:24200852-24201145 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 212
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 122, 137

Conread position: 427-723
Cow position: chrX:34554389-34554684 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 221
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 98, 64

Conread position: 427-724
Cow position: chrX:11806362-11806054 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 216
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 100, 61

Conread position: 427-724
Cow position: chrX:23572146-23571836 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 213
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 94, 0

Conread position: 427-724
Cow position: chrX:25458983-25458673 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 98, 207

Conread position: 427-724
Cow position: chrX:27977175-27976867 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 98, 145

Conread position: 427-725
Cow position: chrX:35937415-35937120 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 177

Conread position: 427-726
Cow position: chrX:27590379-27590074 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 211
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 122, 93

Conread position: 427-726
Cow position: chrX:37072060-37072368 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 223
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 94, 137

Conread position: 427-727
Cow position: chrX:30163584-30163273 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 203
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 205

Conread position: 427-731
Cow position: chrX:40452560-40452243 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 427-732
Cow position: chrX:2300585-2300890 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 97, 215

Conread position: 427-732
Cow position: chrX:2478973-2478656 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 98, 144

Conread position: 427-732
Cow position: chrX:4044204-4043893 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 234
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 106, 97

Conread position: 427-732
Cow position: chrX:4633197-4632884 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 82

Conread position: 427-732
Cow position: chrX:10831858-10831526 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 0

Conread position: 427-732
Cow position: chrX:11655732-11656059 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 427-732
Cow position: chrX:14162845-14163163 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 94, 149

Conread position: 427-732
Cow position: chrX:14819366-14819686 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 210
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 98, 157

Conread position: 427-732
Cow position: chrX:16703324-16703642 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 98, 0

Conread position: 427-732
Cow position: chrX:16711608-16711926 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 217
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 93, 208

Conread position: 427-732
Cow position: chrX:20029900-20030224 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 224
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 6, 0

Conread position: 427-732
Cow position: chrX:20945222-20945532 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 94, 183

Conread position: 427-732
Cow position: chrX:21785422-21785735 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 98, 73

Conread position: 427-732
Cow position: chrX:21833539-21833857 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 215
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 98, 0

Conread position: 427-732
Cow position: chrX:22493661-22493979 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 98, 0

Conread position: 427-732
Cow position: chrX:23122038-23122358 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 220
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 62, 74

Conread position: 427-732
Cow position: chrX:23280660-23280975 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 212
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 98, 0

Conread position: 427-732
Cow position: chrX:24441593-24441275 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 221
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 94, 145

Conread position: 427-732
Cow position: chrX:24587800-24587482 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 213
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 427-732
Cow position: chrX:28632823-28632516 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 210
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 100, 24

Conread position: 427-732
Cow position: chrX:28847222-28846914 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 211

Conread position: 427-732
Cow position: chrX:30228456-30228141 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 98, 51

Conread position: 427-732
Cow position: chrX:30823170-30823488 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 211
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 98, 175

Conread position: 427-732
Cow position: chrX:32094796-32094478 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 98, 145

Conread position: 427-732
Cow position: chrX:32171228-32170920 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 224
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 91, 195

Conread position: 427-732
Cow position: chrX:33855586-33855266 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 61

Conread position: 427-732
Cow position: chrX:35240518-35240834 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 98, 145

Conread position: 427-732
Cow position: chrX:37133880-37133562 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 98, 0

Conread position: 427-732
Cow position: chrX:38094871-38094554 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 179

Conread position: 427-732
Cow position: chrX:40180216-40179908 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 205
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 98, 138

Conread position: 427-732
Cow position: chrX:40544956-40544636 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 98, 147

Conread position: 427-732
Cow position: chrX:41156965-41157283 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 98, 145

Conread position: 427-732
Cow position: chrX:45786784-45787098 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 220
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 98, 272

Conread position: 427-732
Cow position: chrX:45932658-45932976 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 206
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 96, 227

Conread position: 427-732
Cow position: chrX:46771318-46770992 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 285

Conread position: 427-733
Cow position: chrX:323569-323870 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 208
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 151, 104

Conread position: 427-733
Cow position: chrX:7178566-7178866 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 166

Conread position: 427-734
Cow position: chrX:3417485-3417167 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 215
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 93, 310

Conread position: 427-737
Cow position: chrX:27095773-27096090 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 223
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 98, 149

Conread position: 427-739
Cow position: chrX:38072113-38071791 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 89

Conread position: 427-742
Cow position: chrX:45089090-45089429 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 235
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 5, 175

Conread position: 427-743
Cow position: chrX:35409322-35409634 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 183

Conread position: 427-746
Cow position: chrX:24288259-24287944 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 226
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 217, 150

Conread position: 427-748
Cow position: chrX:12249455-12249786 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 196

Conread position: 427-753
Cow position: chrX:12115695-12116037 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 427-753
Cow position: chrX:28134003-28134337 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 254

Conread position: 427-756
Cow position: chrX:26441126-26440784 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 0

Conread position: 427-756
Cow position: chrX:30543628-30543294 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 100, 140

Conread position: 427-757
Cow position: chrX:14974074-14973745 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 87

Conread position: 427-757
Cow position: chrX:45412998-45412664 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 95, 115

Conread position: 427-762
Cow position: chrX:18695267-18694926 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 214

Conread position: 427-762
Cow position: chrX:34502577-34502922 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 140

Conread position: 427-762
Cow position: chrX:34532185-34532520 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 210

Conread position: 427-762
Cow position: chrX:37232065-37232413 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 288

Conread position: 427-762
Cow position: chrX:38577187-38577518 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 236
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 98, 114

Conread position: 427-764
Cow position: chrX:34238374-34238716 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 54, 137

Conread position: 427-764
Cow position: chrX:38936353-38936699 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 149

Conread position: 427-765
Cow position: chrX:2786892-2786554 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 241
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 95, 150

Conread position: 427-769
Cow position: chrX:28097785-28098120 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 98, 15

Conread position: 427-769
Cow position: chrX:34441793-34441443 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 162

Conread position: 427-769
Cow position: chrX:41122726-41123067 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 201

Conread position: 427-769
Cow position: chrX:44192787-44192442 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 246
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 93, 55

Conread position: 427-775
Cow position: chrX:42587775-42587414 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 98, 192

Conread position: 427-793
Cow position: chrX:5017752-5017386 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 116

Conread position: 427-793
Cow position: chrX:5118829-5118477 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 186

Conread position: 427-793
Cow position: chrX:11073551-11073166 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 258

Conread position: 427-793
Cow position: chrX:11718124-11717758 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 26

Conread position: 427-793
Cow position: chrX:32309755-32310130 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 249
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 94, 274

Conread position: 427-793
Cow position: chrX:34754538-34754167 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 303

Conread position: 427-793
Cow position: chrX:40269130-40269516 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 345

Conread position: 427-793
Cow position: chrX:42247522-42247157 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 117

Conread position: 427-796
Cow position: chrX:47211196-47210815 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 255
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 93, 338

Conread position: 427-799
Cow position: chrX:8899678-8900058 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 312

Conread position: 427-799
Cow position: chrX:27516187-27516561 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 206

Conread position: 427-800
Cow position: chrX:47967254-47967639 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 117

Conread position: 427-820
Cow position: chrX:10437997-10437610 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 99

Conread position: 428-523
Cow position: chrX:9417098-9417003 (view UCSC Genome Browser custom track)
Alignm length: 96
Alignm identity: 84
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 428-632
Cow position: chrX:21844289-21844503 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 97, 0

Conread position: 428-679
Cow position: chrX:22567185-22567449 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 428-679
Cow position: chrX:34009405-34009663 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 99, 0

Conread position: 428-729
Cow position: chrX:44731255-44731562 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 32, 25

Conread position: 428-732
Cow position: chrX:7054080-7053763 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 225
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 99, 143

Conread position: 428-732
Cow position: chrX:18999553-18999856 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 93, 127

Conread position: 428-762
Cow position: chrX:35609641-35609989 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 0

Conread position: 428-793
Cow position: chrX:13912734-13913095 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 254
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 96, 214

Conread position: 429-582
Cow position: chrX:30531374-30531221 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 33

Conread position: 429-623
Cow position: chrX:19320246-19320445 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 136
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 429-631
Cow position: chrX:27678009-27678218 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 429-632
Cow position: chrX:6869907-6869697 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 91, 0

Conread position: 429-632
Cow position: chrX:29912995-29913205 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 429-632
Cow position: chrX:39954882-39954672 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 429-633
Cow position: chrX:4664961-4664750 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 429-633
Cow position: chrX:15341382-15341171 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 429-637
Cow position: chrX:9593479-9593264 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 429-662
Cow position: chrX:5676041-5675807 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 167
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 95, 19

Conread position: 429-675
Cow position: chrX:4415511-4415747 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 429-678
Cow position: chrX:5856856-5856603 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 429-678
Cow position: chrX:24169658-24169398 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 17

Conread position: 429-679
Cow position: chrX:12347534-12347795 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 429-679
Cow position: chrX:16279305-16279566 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 91, 0

Conread position: 429-679
Cow position: chrX:22329914-22329657 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 63

Conread position: 429-679
Cow position: chrX:27323200-27322955 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 124, 72

Conread position: 429-679
Cow position: chrX:27759363-27759624 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 429-679
Cow position: chrX:42591381-42591642 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 177
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 91, 0

Conread position: 429-680
Cow position: chrX:17743726-17743978 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 168
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 120, 71

Conread position: 429-681
Cow position: chrX:24231463-24231212 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 173
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 106, 64

Conread position: 429-681
Cow position: chrX:27486066-27486325 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 60, 139

Conread position: 429-682
Cow position: chrX:31839165-31839429 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 429-686
Cow position: chrX:18950089-18949820 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 193
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 96, 0

Conread position: 429-686
Cow position: chrX:29049632-29049884 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 118, 13

Conread position: 429-702
Cow position: chrX:24809314-24809032 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 192
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 91, 172

Conread position: 429-723
Cow position: chrX:11860586-11860279 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 213
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 91, 275

Conread position: 429-723
Cow position: chrX:15114327-15114634 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 201
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 91, 205

Conread position: 429-723
Cow position: chrX:26229852-26229551 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 206
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 91, 199

Conread position: 429-723
Cow position: chrX:34333544-34333237 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 208
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 429-723
Cow position: chrX:42733521-42733820 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 96, 211

Conread position: 429-724
Cow position: chrX:9096323-9096629 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 213
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 96, 153

Conread position: 429-724
Cow position: chrX:38051776-38051470 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 203
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 92, 0

Conread position: 429-726
Cow position: chrX:30180270-30179960 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 96, 206

Conread position: 429-729
Cow position: chrX:41403617-41403943 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 96, 0

Conread position: 429-729
Cow position: chrX:41410165-41410491 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 237
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 96, 0

Conread position: 429-732
Cow position: chrX:4905333-4905019 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 96, 0

Conread position: 429-732
Cow position: chrX:18078254-18077938 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 220
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 96, 0

Conread position: 429-732
Cow position: chrX:30143628-30143313 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 222
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 96, 85

Conread position: 429-732
Cow position: chrX:47481456-47481769 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 216
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 96, 58

Conread position: 429-734
Cow position: chrX:2104061-2104374 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 91, 305

Conread position: 429-734
Cow position: chrX:13971571-13971254 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 309

Conread position: 429-734
Cow position: chrX:14846418-14846101 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 216
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 94, 143

Conread position: 429-734
Cow position: chrX:29841513-29841196 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 208
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 91, 143

Conread position: 429-734
Cow position: chrX:39292087-39291788 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 206
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 137

Conread position: 431-631
Cow position: chrX:529461-529664 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 138

Conread position: 431-678
Cow position: chrX:29010391-29010647 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 166

Conread position: 431-681
Cow position: chrX:25329671-25329931 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 44

Conread position: 431-683
Cow position: chrX:34840109-34839860 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 178
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 57

Conread position: 431-762
Cow position: chrX:40558018-40557680 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 198

Conread position: 432-681
Cow position: chrX:12852850-12852591 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 178
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 93, 131

Conread position: 434-732
Cow position: chrX:15545558-15545859 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 194

Conread position: 434-761
Cow position: chrX:7508788-7509142 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 242
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 96, 28

Conread position: 434-762
Cow position: chrX:43527163-43527509 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 340

Conread position: 435-689
Cow position: chrX:32144501-32144241 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 90, 211

Conread position: 435-693
Cow position: chrX:16706461-16706735 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 67, 209

Conread position: 435-693
Cow position: chrX:16713859-16714129 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 185
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 435-732
Cow position: chrX:2425460-2425150 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 211
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 90, 137

Conread position: 436-632
Cow position: chrX:36678006-36677804 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 74

Conread position: 436-711
Cow position: chrX:42855073-42855361 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 436-723
Cow position: chrX:13196308-13196008 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 196
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 436-723
Cow position: chrX:18024703-18025002 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 198
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 84, 6

Conread position: 436-734
Cow position: chrX:20742649-20742959 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 208
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 85, 302

Conread position: 436-734
Cow position: chrX:23215770-23216080 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 210
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 198

Conread position: 436-734
Cow position: chrX:30686933-30686620 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 209
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 84, 305

Conread position: 436-798
Cow position: chrX:11975824-11975461 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 237
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 85, 154

Conread position: 437-637
Cow position: chrX:40591350-40591557 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 439-719
Cow position: chrX:26619695-26619407 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 16, 12

Conread position: 439-732
Cow position: chrX:38007102-38006797 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 0

Conread position: 439-733
Cow position: chrX:36778071-36778380 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 439-753
Cow position: chrX:7645924-7646243 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 200

Conread position: 439-769
Cow position: chrX:6234768-6234445 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 237, 34

Conread position: 439-791
Cow position: chrX:43114838-43115174 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 246
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 33, 160

Conread position: 442-680
Cow position: chrX:44930303-44930553 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 0

Conread position: 442-725
Cow position: chrX:10306342-10306635 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 205
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 107, 0

Conread position: 442-732
Cow position: chrX:48287771-48287482 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 78, 124

Conread position: 443-623
Cow position: chrX:8103423-8103236 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 443-637
Cow position: chrX:30060861-30060660 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 443-664
Cow position: chrX:26754115-26753882 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 443-734
Cow position: chrX:29083795-29084093 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 186

Conread position: 443-746
Cow position: chrX:34454344-34454649 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 82, 36

Conread position: 443-756
Cow position: chrX:35681005-35681335 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 250
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 82, 185

Conread position: 443-757
Cow position: chrX:5638498-5638174 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 216

Conread position: 444-682
Cow position: chrX:27419311-27419066 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 163
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 81, 201

Conread position: 444-723
Cow position: chrX:29844805-29844513 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 76, 260

Conread position: 444-732
Cow position: chrX:16783165-16783459 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 198
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 76, 0

Conread position: 445-623
Cow position: chrX:32214799-32214614 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 445-679
Cow position: chrX:16074248-16074493 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 445-721
Cow position: chrX:17964843-17964562 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 187
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 180, 112

Conread position: 445-723
Cow position: chrX:12850804-12851095 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 446-682
Cow position: chrX:33205319-33205077 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 185
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 79, 198

Conread position: 447-671
Cow position: chrX:45421001-45420764 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 447-723
Cow position: chrX:15008758-15008471 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 73, 257

Conread position: 447-723
Cow position: chrX:29356261-29356550 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 191
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 447-732
Cow position: chrX:26492676-26492974 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 200
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 448-680
Cow position: chrX:27458930-27459174 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 73, 0

Conread position: 448-734
Cow position: chrX:33466292-33466578 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 182

Conread position: 449-723
Cow position: chrX:27469978-27469691 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 193
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 71, 0

Conread position: 450-687
Cow position: chrX:48675752-48675998 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 450-692
Cow position: chrX:6012430-6012177 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 450-732
Cow position: chrX:36311276-36311546 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 198
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 71, 161

Conread position: 450-742
Cow position: chrX:828569-828868 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 200
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 64

Conread position: 451-679
Cow position: chrX:21063964-21064196 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 172
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 74, 161

Conread position: 451-732
Cow position: chrX:14924678-14924968 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 142

Conread position: 451-734
Cow position: chrX:28157165-28157466 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 219
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 70, 20

Conread position: 453-719
Cow position: chrX:34990721-34990989 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 191
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 68, 123

Conread position: 454-679
Cow position: chrX:3658373-3658137 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 454-800
Cow position: chrX:47873660-47873304 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 252
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 69, 126

Conread position: 454-903
Cow position: chrX:36692916-36693363 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 287
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 71, 280

Conread position: 456-625
Cow position: chrX:616720-616547 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 141
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 96, 0

Conread position: 458-610
Cow position: chrX:37129007-37129163 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 104

Conread position: 459-732
Cow position: chrX:39704391-39704666 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 66, 34

Conread position: 462-679
Cow position: chrX:20376659-20376878 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 169

Conread position: 462-723
Cow position: chrX:12032660-12032934 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 242

Conread position: 462-723
Cow position: chrX:30162686-30162955 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 196
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 63, 109

Conread position: 462-756
Cow position: chrX:7350991-7351295 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 131

Conread position: 462-770
Cow position: chrX:25713498-25713800 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 214
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 37

Conread position: 465-678
Cow position: chrX:25618226-25617996 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 465-679
Cow position: chrX:42779434-42779209 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 169

Conread position: 465-717
Cow position: chrX:23061146-23061398 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 99

Conread position: 465-719
Cow position: chrX:43101219-43101486 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 465-723
Cow position: chrX:4404227-4404495 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 220

Conread position: 465-723
Cow position: chrX:30021406-30021135 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 465-723
Cow position: chrX:39667501-39667230 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 239

Conread position: 465-723
Cow position: chrX:45373600-45373329 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 56, 129

Conread position: 465-734
Cow position: chrX:3895284-3895003 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 189
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 169

Conread position: 465-753
Cow position: chrX:12826439-12826738 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 200
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 241

Conread position: 465-753
Cow position: chrX:19188628-19188929 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 190

Conread position: 465-769
Cow position: chrX:20709767-20710080 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 84, 76

Conread position: 465-793
Cow position: chrX:28845536-28845858 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 56, 107

Conread position: 466-628
Cow position: chrX:45410350-45410180 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 45, 0

Conread position: 466-681
Cow position: chrX:38794418-38794644 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 466-709
Cow position: chrX:24125378-24125124 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 59, 241

Conread position: 466-711
Cow position: chrX:46606817-46606562 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 466-757
Cow position: chrX:33639661-33639968 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 219
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 24

Conread position: 467-720
Cow position: chrX:11314084-11313828 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 175
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 51, 222

Conread position: 468-623
Cow position: chrX:5919165-5919327 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 468-734
Cow position: chrX:4869238-4869516 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 270

Conread position: 468-765
Cow position: chrX:45414605-45414296 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 220
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 59, 0

Conread position: 469-680
Cow position: chrX:5047201-5046990 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 109

Conread position: 471-800
Cow position: chrX:30133626-30133286 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 50, 128

Conread position: 473-745
Cow position: chrX:33020186-33020467 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 98

Conread position: 474-723
Cow position: chrX:14221784-14222042 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 180
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 47, 112

Conread position: 474-724
Cow position: chrX:35273045-35273314 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 53, 250

Conread position: 474-742
Cow position: chrX:1176273-1176001 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 47, 81

Conread position: 475-699
Cow position: chrX:41238661-41238436 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 50, 176

Conread position: 475-793
Cow position: chrX:19015144-19015462 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 152

Conread position: 476-679
Cow position: chrX:35497789-35498003 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 477-723
Cow position: chrX:754662-754921 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 477-809
Cow position: chrX:16478606-16478948 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 224
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 261

Conread position: 478-732
Cow position: chrX:18194618-18194883 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 179
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 478-732
Cow position: chrX:23264732-23264465 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 478-732
Cow position: chrX:23451466-23451197 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 479-699
Cow position: chrX:48536946-48536728 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 40

Conread position: 480-726
Cow position: chrX:22482982-22482725 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 188
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 480-793
Cow position: chrX:25237885-25238204 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 90

Conread position: 482-732
Cow position: chrX:35041931-35042192 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 189
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 65, 0

Conread position: 483-732
Cow position: chrX:4269357-4269094 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 37, 32

Conread position: 483-800
Cow position: chrX:44835106-44834774 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 223
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 41, 288

Conread position: 486-800
Cow position: chrX:48195328-48195003 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 230
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 42, 282

Conread position: 487-796
Cow position: chrX:46723027-46722706 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 231
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 38, 278

Conread position: 487-805
Cow position: chrX:46033004-46032691 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 216
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 40, 174

Conread position: 489-798
Cow position: chrX:38102728-38102413 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 206
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 85

Conread position: 490-800
Cow position: chrX:2467597-2467916 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 234
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 35, 48

Conread position: 491-753
Cow position: chrX:16762490-16762760 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 36, 133

Conread position: 492-732
Cow position: chrX:37836308-37836556 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 57, 0

Conread position: 492-765
Cow position: chrX:42874697-42874987 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 83

Conread position: 493-732
Cow position: chrX:9997611-9997368 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 25, 133

Conread position: 493-757
Cow position: chrX:40647698-40647981 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 204
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 30, 0

Conread position: 493-796
Cow position: chrX:8730799-8731122 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 227
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 34, 0

Conread position: 495-753
Cow position: chrX:8925428-8925692 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 195
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 57, 148

Conread position: 496-732
Cow position: chrX:12017998-12018259 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 135

Conread position: 496-732
Cow position: chrX:30921908-30922153 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 34, 105

Conread position: 496-753
Cow position: chrX:35413353-35413612 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 203
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 29, 146

Conread position: 497-680
Cow position: chrX:16531723-16531911 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 28, 76

Conread position: 498-732
Cow position: chrX:7496974-7497207 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 173
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 34, 24

Conread position: 498-769
Cow position: chrX:34270141-34270407 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 181, 66

Conread position: 500-667
Cow position: chrX:5856596-5856422 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 501-746
Cow position: chrX:32020391-32020135 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 14, 19

Conread position: 505-800
Cow position: chrX:45404102-45403793 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 214
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 22, 268

Conread position: 506-746
Cow position: chrX:40183617-40183359 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 506-793
Cow position: chrX:17725711-17726000 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 212
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 19, 133

Conread position: 507-732
Cow position: chrX:488224-488459 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 164
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 508-757
Cow position: chrX:11633421-11633675 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 164, 39

Conread position: 511-680
Cow position: chrX:45787393-45787565 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 7, 131

Conread position: 514-732
Cow position: chrX:20151591-20151817 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 126

Conread position: 519-732
Cow position: chrX:28878413-28878202 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 39, 110

Conread position: 519-761
Cow position: chrX:25816147-25815910 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 124

Conread position: 519-793
Cow position: chrX:24366080-24365796 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 199
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 33, 58

Conread position: 520-794
Cow position: chrX:23497913-23497641 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 207
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 29, 42

Conread position: 523-732
Cow position: chrX:41673855-41674077 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 523-793
Cow position: chrX:27432166-27431893 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 190
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 30, 215

Conread position: 529-763
Cow position: chrX:34663080-34662848 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 150, 29

Conread position: 535-732
Cow position: chrX:20752028-20752222 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 140, 98

Conread position: 535-757
Cow position: chrX:42492745-42492523 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 143, 29

Conread position: 535-793
Cow position: chrX:11939159-11938910 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 179
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 43, 155

Conread position: 536-726
Cow position: chrX:38642026-38642223 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 536-762
Cow position: chrX:39938751-39938523 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 98, 26

Conread position: 536-788
Cow position: chrX:34411608-34411866 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 136

Conread position: 541-732
Cow position: chrX:42282207-42282395 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 98, 0

Conread position: 542-687
Cow position: chrX:23017777-23017926 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 145

Conread position: 542-732
Cow position: chrX:25411612-25411808 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 71, 128

Conread position: 543-757
Cow position: chrX:37910228-37910437 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 9, 80

Conread position: 545-765
Cow position: chrX:40116200-40116418 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 143, 186

Conread position: 547-719
Cow position: chrX:4942969-4942800 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 141, 86

Conread position: 547-753
Cow position: chrX:48236592-48236810 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 165

Conread position: 547-756
Cow position: chrX:13265839-13265631 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 141, 104

Conread position: 547-792
Cow position: chrX:36975730-36975976 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 128, 205

Conread position: 548-708
Cow position: chrX:18812040-18812196 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 548-716
Cow position: chrX:42499247-42499073 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 548-717
Cow position: chrX:6639906-6640082 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 548-719
Cow position: chrX:4750516-4750350 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 140, 29

Conread position: 548-719
Cow position: chrX:22074582-22074754 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 140, 0

Conread position: 548-723
Cow position: chrX:9855082-9855263 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 548-723
Cow position: chrX:9953923-9954104 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 0

Conread position: 548-724
Cow position: chrX:7513298-7513473 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 142, 24

Conread position: 548-726
Cow position: chrX:30963090-30962912 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 131, 84

Conread position: 548-732
Cow position: chrX:17042472-17042660 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 548-732
Cow position: chrX:19930438-19930618 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 548-732
Cow position: chrX:21663091-21663272 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 28

Conread position: 548-732
Cow position: chrX:42381318-42381135 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 133, 99

Conread position: 548-732
Cow position: chrX:43049124-43049316 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 13, 0

Conread position: 548-733
Cow position: chrX:3579718-3579913 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 19, 188

Conread position: 548-733
Cow position: chrX:48684441-48684257 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 128, 85

Conread position: 548-734
Cow position: chrX:2383271-2383457 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 20

Conread position: 548-736
Cow position: chrX:2206762-2206579 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 128, 88

Conread position: 548-748
Cow position: chrX:6690466-6690272 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 133, 85

Conread position: 548-748
Cow position: chrX:27394232-27394036 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 100, 79

Conread position: 548-753
Cow position: chrX:16416290-16416499 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 75, 27

Conread position: 548-753
Cow position: chrX:27514650-27514859 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 165

Conread position: 548-753
Cow position: chrX:42339154-42338955 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 135, 89

Conread position: 548-756
Cow position: chrX:6488368-6488574 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 128, 85

Conread position: 548-756
Cow position: chrX:17631020-17630812 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 185, 19

Conread position: 548-756
Cow position: chrX:22821829-22822042 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 144

Conread position: 548-756
Cow position: chrX:39558566-39558356 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 16, 90

Conread position: 548-757
Cow position: chrX:1514619-1514415 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 131, 79

Conread position: 548-757
Cow position: chrX:11589810-11589592 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 79

Conread position: 548-762
Cow position: chrX:17662815-17662593 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 74, 0

Conread position: 548-762
Cow position: chrX:17888624-17888419 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 157
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 184, 57

Conread position: 548-762
Cow position: chrX:36283127-36283353 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 548-765
Cow position: chrX:14900939-14900726 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 133, 16

Conread position: 548-769
Cow position: chrX:11856211-11856435 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 137, 28

Conread position: 548-769
Cow position: chrX:44961529-44961756 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 31, 20

Conread position: 548-769
Cow position: chrX:47757147-47756923 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 128, 164

Conread position: 548-771
Cow position: chrX:23091663-23091873 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 184, 137

Conread position: 548-772
Cow position: chrX:7721766-7721997 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 183
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 77, 154

Conread position: 548-773
Cow position: chrX:40788986-40789218 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 138

Conread position: 548-776
Cow position: chrX:678786-678558 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 74, 121

Conread position: 548-793
Cow position: chrX:619226-618977 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 73, 214

Conread position: 548-793
Cow position: chrX:12980049-12979809 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 174
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 78, 176

Conread position: 548-793
Cow position: chrX:23514236-23513990 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 189
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 58, 35

Conread position: 548-793
Cow position: chrX:26876099-26875856 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 185
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 142, 16

Conread position: 548-793
Cow position: chrX:27680185-27680423 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 181
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 140, 10

Conread position: 548-795
Cow position: chrX:33493557-33493807 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 24

Conread position: 548-799
Cow position: chrX:9416911-9416653 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 139, 209

Conread position: 548-800
Cow position: chrX:17231516-17231767 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 129, 91

Conread position: 548-800
Cow position: chrX:34543569-34543816 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 189
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 132, 53

Conread position: 548-800
Cow position: chrX:48010376-48010636 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 227

Conread position: 548-800
Cow position: chrX:48652945-48652689 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 180
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 31, 19

Conread position: 548-805
Cow position: chrX:9635399-9635144 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 209, 141

Conread position: 548-809
Cow position: chrX:1503121-1503381 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 140, 16

Conread position: 548-813
Cow position: chrX:35542673-35542944 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 197
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 90, 209

Conread position: 548-834
Cow position: chrX:15814879-15815145 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 140, 65

Conread position: 549-753
Cow position: chrX:39126121-39126318 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 132, 27

Conread position: 551-732
Cow position: chrX:16541891-16541704 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 74, 12

Conread position: 551-740
Cow position: chrX:46430074-46429882 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 155

Conread position: 551-746
Cow position: chrX:45015370-45015563 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 13, 79

Conread position: 551-748
Cow position: chrX:40567384-40567588 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 184

Conread position: 551-756
Cow position: chrX:37048796-37048583 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 17, 142

Conread position: 551-757
Cow position: chrX:35284407-35284615 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 162
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 12, 83

Conread position: 551-793
Cow position: chrX:29602048-29601803 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 26, 12

Conread position: 551-793
Cow position: chrX:41167179-41166937 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 125, 13

Conread position: 551-797
Cow position: chrX:41884633-41884375 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 72, 222

Conread position: 551-799
Cow position: chrX:6278721-6278467 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 72, 219

Conread position: 551-799
Cow position: chrX:21672336-21672585 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 72, 180

Conread position: 551-800
Cow position: chrX:29509659-29509406 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 192
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 129, 218

Conread position: 552-757
Cow position: chrX:32128194-32127995 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 67, 12

Conread position: 552-793
Cow position: chrX:23970174-23970404 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 136, 81

Conread position: 553-893
Cow position: chrX:44053045-44053383 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 218
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 135, 208

Conread position: 554-687
Cow position: chrX:31745259-31745124 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 72, 123

Conread position: 554-726
Cow position: chrX:27174782-27174957 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 14, 84

Conread position: 554-755
Cow position: chrX:36355910-36356105 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 136, 50

Conread position: 554-767
Cow position: chrX:38549236-38549451 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 69, 132

Conread position: 555-723
Cow position: chrX:16324175-16324006 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 82

Conread position: 555-732
Cow position: chrX:841947-842127 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 124, 78

Conread position: 555-732
Cow position: chrX:29542430-29542252 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 133, 0

Conread position: 556-762
Cow position: chrX:26285770-26285979 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 119, 8

Conread position: 557-732
Cow position: chrX:877233-877061 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 126, 96

Conread position: 558-724
Cow position: chrX:40035653-40035484 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 67, 91

Conread position: 558-762
Cow position: chrX:9425950-9425743 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 168

Conread position: 559-732
Cow position: chrX:32420011-32420187 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 559-756
Cow position: chrX:46315588-46315383 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 559-799
Cow position: chrX:21004474-21004715 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 209

Conread position: 560-726
Cow position: chrX:16996300-16996463 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 136, 73

Conread position: 560-769
Cow position: chrX:46587611-46587827 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 116, 0

Conread position: 562-767
Cow position: chrX:29545084-29544869 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 55, 63

Conread position: 563-762
Cow position: chrX:17908487-17908288 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 125, 64

Conread position: 564-732
Cow position: chrX:27772162-27771994 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 124, 30

Conread position: 564-747
Cow position: chrX:37781320-37781126 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 565-757
Cow position: chrX:30833047-30832854 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 123, 82

Conread position: 567-768
Cow position: chrX:1499470-1499670 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 116, 66

Conread position: 569-800
Cow position: chrX:40809489-40809725 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 110, 203

Conread position: 571-732
Cow position: chrX:36067824-36067980 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 572-793
Cow position: chrX:13785551-13785335 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 5, 15

Conread position: 577-721
Cow position: chrX:24149450-24149597 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 577-732
Cow position: chrX:23785464-23785630 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 577-746
Cow position: chrX:37540935-37541108 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 102, 62

Conread position: 577-757
Cow position: chrX:43730404-43730227 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 140
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 82, 62

Conread position: 577-765
Cow position: chrX:36961446-36961645 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 190

Conread position: 577-770
Cow position: chrX:33000714-33000910 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 46, 81

Conread position: 577-793
Cow position: chrX:31311836-31312054 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 49, 178

Conread position: 578-757
Cow position: chrX:13382137-13382325 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 578-793
Cow position: chrX:42235722-42235499 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 42, 193

Conread position: 580-732
Cow position: chrX:31256681-31256833 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 108, 59

Conread position: 584-753
Cow position: chrX:32820847-32821021 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 11

Conread position: 585-732
Cow position: chrX:7336645-7336796 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 589-764
Cow position: chrX:47186498-47186319 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 594-769
Cow position: chrX:6407376-6407551 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 60, 52

Conread position: 595-732
Cow position: chrX:27145452-27145590 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 609-758
Cow position: chrX:27227966-27228124 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 617-756
Cow position: chrX:29680409-29680266 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 627-793
Cow position: chrX:616401-616234 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 61, 126

Show alignments to all cow chromosomes.