Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-321
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               130, 33
               

               Conread position:
               3-357
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 35
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 63
               

               Conread position:
               3-374
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 76
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 56
               

               Conread position:
               5-368
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 29
               

               Conread position:
               5-383
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               87, 25
               

               Conread position:
               51-383
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               35, 14
               

               Conread position:
               53-355
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               223
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               38, 6
               

               Conread position:
               64-374
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               69, 14
               

               Conread position:
               85-293
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 8
               

               Conread position:
               113-335
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               113-364
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               28, 55
               

               Conread position:
               113-368
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               35, 54
               

               Conread position:
               113-383
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 65
               

               Conread position:
               113-387
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               201
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               36, 51
               

               Conread position:
               113-388
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               36, 53
               

               Conread position:
               115-372
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               118-373
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               33, 49
               

               Conread position:
               124-372
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               140-374
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               88, 8
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               148-372
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               161-366
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               175, 113
               

               Conread position:
               165-383
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               33, 49
               

               Conread position:
               167-374
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               31, 176
               

               Conread position:
               168-372
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               59, 116
               

               Conread position:
               168-372
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               168-373
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               168-373
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               30, 178
               

               Conread position:
               168-373
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               168-374
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               60, 151
               

               Conread position:
               174-285
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               175-371
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               175-372
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               48, 107
               

               Conread position:
               175-372
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               161, 58
               

               Conread position:
               176-372
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               5, 12
               

               Conread position:
               181-387
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               182-328
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 98
               

               Conread position:
               183-373
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               192-387
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               206-404
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               163, 0
               

               Conread position:
               239-387
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 99
               

               Conread position:
               241-366
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               254-374
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               94
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               391-816
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 34
               

               Conread position:
               413-692
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               123, 53
               

               Conread position:
               415-835
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               96, 13
               

               Conread position:
               421-831
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 233
               

               Conread position:
               422-815
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               65, 60
               

               Conread position:
               424-683
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               145, 115
               

               Conread position:
               428-728
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               428-827
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               108, 20
               

               Conread position:
               428-835
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               262
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               152, 107
               

               Conread position:
               430-816
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               71, 94
               

               Conread position:
               430-823
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               262
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               115, 70
               

               Conread position:
               441-827
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 89
               

               Conread position:
               441-831
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               27, 108
               

               Conread position:
               443-832
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               274
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               139, 61
               

               Conread position:
               447-816
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               192, 98
               

               Conread position:
               447-832
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               161, 98
               

               Conread position:
               468-810
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               223
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               61, 109
               

               Conread position:
               471-772
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               100, 27
               

               Conread position:
               503-832
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               42, 145
               

               Conread position:
               538-832
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               31, 96
               

               Conread position:
               547-832
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               138, 24
               

               Conread position:
               550-832
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               17, 5
               

               Conread position:
               565-814
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 26
               

               Conread position:
               580-806
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 163
               

               Conread position:
               585-829
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               133, 15
               

               Conread position:
               585-867
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               102, 44
               

               Conread position:
               591-831
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               150, 53
               

               Conread position:
               592-832
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               95, 86
               

               Conread position:
               594-832
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               93, 60
               

               Conread position:
               616-832
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               48, 25
               

               Conread position:
               690-834
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               723-816
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               723-831
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               26, 21
               

               Conread position:
               723-835
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               26, 20
               
Show alignments to all cow chromosomes.