Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-281
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               259
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 29
               

               Conread position:
               3-391
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               3-396
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               268
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               23, 31
               

               Conread position:
               3-408
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 61
               

               Conread position:
               4-374
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 54
               

               Conread position:
               5-400
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               39-373
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               51-323
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               82, 8
               

               Conread position:
               51-401
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 13
               

               Conread position:
               57-373
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 112
               

               Conread position:
               80-374
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 55
               

               Conread position:
               80-374
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               216
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               85-372
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               145, 36
               

               Conread position:
               91-369
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               205
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               43, 76
               

               Conread position:
               92-255
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               57, 75
               

               Conread position:
               113-334
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               113-337
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               113-367
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               113-368
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 55
               

               Conread position:
               113-372
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               6, 55
               

               Conread position:
               113-373
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               205
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 24
               

               Conread position:
               114-337
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               9, 54
               

               Conread position:
               114-370
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               19, 23
               

               Conread position:
               114-372
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               8, 32
               

               Conread position:
               114-373
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 53
               

               Conread position:
               119-368
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               30, 47
               

               Conread position:
               122-372
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               79, 13
               

               Conread position:
               124-372
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               10, 27
               

               Conread position:
               124-387
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               103, 24
               

               Conread position:
               141-367
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               141-370
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               88, 8
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               148-372
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               81, 16
               

               Conread position:
               167-383
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               33, 170
               

               Conread position:
               168-320
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               63, 136
               

               Conread position:
               168-391
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               28, 121
               

               Conread position:
               175-326
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               177-412
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               178-335
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               181-374
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               160
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               182-365
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               182-401
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               48, 217
               

               Conread position:
               184-374
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               12, 116
               

               Conread position:
               184-387
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               164
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               186-383
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               162
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               38, 181
               

               Conread position:
               189-401
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               116, 25
               

               Conread position:
               375-812
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 19
               

               Conread position:
               380-809
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               391-705
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               132, 22
               

               Conread position:
               394-826
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               289
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               38, 75
               

               Conread position:
               414-799
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               87, 15
               

               Conread position:
               414-835
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 6
               

               Conread position:
               415-596
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               415-617
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               416-831
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               417-832
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               281
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               112, 174
               

               Conread position:
               424-716
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               82, 26
               

               Conread position:
               427-828
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               74, 90
               

               Conread position:
               428-816
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               218, 31
               

               Conread position:
               428-831
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               139, 72
               

               Conread position:
               428-832
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 21
               

               Conread position:
               430-832
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               103, 51
               

               Conread position:
               430-837
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               265
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               78, 9
               

               Conread position:
               444-831
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               79, 66
               

               Conread position:
               447-832
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               54, 19
               

               Conread position:
               447-833
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               73, 101
               

               Conread position:
               458-728
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               65, 188
               

               Conread position:
               458-835
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               253
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               109, 86
               

               Conread position:
               469-686
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               103, 73
               

               Conread position:
               469-832
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               264
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               36, 126
               

               Conread position:
               484-814
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 50
               

               Conread position:
               506-805
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               205
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               63, 27
               

               Conread position:
               506-832
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               60, 40
               

               Conread position:
               507-832
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               73, 172
               

               Conread position:
               526-841
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               163, 105
               

               Conread position:
               547-778
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               563-823
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               186, 27
               

               Conread position:
               580-835
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               107, 35
               

               Conread position:
               583-829
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               27, 84
               

               Conread position:
               585-832
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               100, 164
               

               Conread position:
               589-832
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               93, 107
               

               Conread position:
               613-816
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               148
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               74, 134
               

               Conread position:
               615-835
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 97
               

               Conread position:
               651-816
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 27
               

               Conread position:
               690-831
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               700-832
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               18, 41
               
Show alignments to all cow chromosomes.