Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 29
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 61
               

               Conread position:
               3-373
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               3-383
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               89, 22
               

               Conread position:
               3-396
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               274
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 55
               

               Conread position:
               22-404
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               62, 40
               

               Conread position:
               51-383
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 12
               

               Conread position:
               57-374
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 113
               

               Conread position:
               64-370
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               27, 84
               

               Conread position:
               85-387
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               166, 19
               

               Conread position:
               86-274
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               37, 17
               

               Conread position:
               113-364
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               113-364
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               203
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               20, 38
               

               Conread position:
               118-381
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               23, 35
               

               Conread position:
               124-368
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 18
               

               Conread position:
               124-372
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               126-383
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               75, 9
               

               Conread position:
               128-373
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               140-373
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               89, 8
               

               Conread position:
               141-363
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               114, 7
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               141-387
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               92, 7
               

               Conread position:
               141-394
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               148-383
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               149-368
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               80, 16
               

               Conread position:
               168-373
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               87, 74
               

               Conread position:
               168-391
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               81, 45
               

               Conread position:
               181-374
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               165
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               17, 162
               

               Conread position:
               182-373
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 99
               

               Conread position:
               203-370
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               134
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               30, 126
               

               Conread position:
               395-837
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               142, 30
               

               Conread position:
               412-652
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               96, 8
               

               Conread position:
               415-830
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               277
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               129, 5
               

               Conread position:
               416-835
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 182
               

               Conread position:
               421-832
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               281
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               28, 231
               

               Conread position:
               422-861
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               292
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               102, 51
               

               Conread position:
               423-835
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               286
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               32, 272
               

               Conread position:
               424-834
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 96
               

               Conread position:
               428-796
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 57
               

               Conread position:
               428-832
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               278
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               73, 97
               

               Conread position:
               443-745
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               28, 79
               

               Conread position:
               447-803
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               82, 118
               

               Conread position:
               447-831
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               51, 19
               

               Conread position:
               460-813
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               107, 87
               

               Conread position:
               538-831
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               58, 274
               

               Conread position:
               559-831
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               8, 24
               

               Conread position:
               560-835
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               562-832
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               17, 60
               

               Conread position:
               570-835
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               32, 72
               

               Conread position:
               591-816
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               131, 89
               

               Conread position:
               609-832
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               69, 56
               

               Conread position:
               611-837
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               107, 32
               

               Conread position:
               670-833
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 72
               

               Conread position:
               687-832
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 57
               

               Conread position:
               690-832
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 131
               
Show alignments to all cow chromosomes.