Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-251
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               20, 64
               

               Conread position:
               3-308
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               61, 40
               

               Conread position:
               3-362
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 121
               

               Conread position:
               3-374
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               255
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               89, 28
               

               Conread position:
               3-374
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 23
               

               Conread position:
               3-391
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               32, 63
               

               Conread position:
               3-393
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 52
               

               Conread position:
               3-405
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 63
               

               Conread position:
               4-298
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               88, 61
               

               Conread position:
               5-368
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 112
               

               Conread position:
               32-391
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               264
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               56, 27
               

               Conread position:
               39-368
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               239
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               53, 25
               

               Conread position:
               51-404
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               254
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               98, 14
               

               Conread position:
               85-374
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 15
               

               Conread position:
               112-355
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               113-368
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               20, 55
               

               Conread position:
               113-372
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               197
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               38, 51
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               28, 47
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               113-382
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               113-383
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 54
               

               Conread position:
               113-387
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               114-303
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               34, 11
               

               Conread position:
               141-367
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               87, 7
               

               Conread position:
               161-321
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               167-373
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               31, 176
               

               Conread position:
               168-367
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               66, 113
               

               Conread position:
               182-402
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               15, 100
               

               Conread position:
               226-372
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               259-372
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               386-616
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               6, 27
               

               Conread position:
               408-697
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               137, 17
               

               Conread position:
               412-661
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               124, 15
               

               Conread position:
               416-808
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 105
               

               Conread position:
               416-835
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               268
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               117, 9
               

               Conread position:
               422-666
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               117, 146
               

               Conread position:
               423-827
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 210
               

               Conread position:
               428-810
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               73, 97
               

               Conread position:
               434-832
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               277
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               76, 28
               

               Conread position:
               440-618
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               60, 153
               

               Conread position:
               444-829
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               66, 31
               

               Conread position:
               447-832
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               250
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               89, 19
               

               Conread position:
               453-801
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               48, 94
               

               Conread position:
               453-812
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               256
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               24, 136
               

               Conread position:
               504-835
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               181, 29
               

               Conread position:
               533-835
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               41, 96
               

               Conread position:
               542-808
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               27, 106
               

               Conread position:
               548-832
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               19, 97
               

               Conread position:
               576-801
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               111, 33
               

               Conread position:
               609-837
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               33, 95
               

               Conread position:
               716-835
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               15, 0
               
Show alignments to all cow chromosomes.