Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-231
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               34, 67
               

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 29
               

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               252
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               93, 23
               

               Conread position:
               3-371
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 29
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 29
               

               Conread position:
               3-374
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 56
               

               Conread position:
               3-374
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 17
               

               Conread position:
               3-375
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 63
               

               Conread position:
               3-382
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 30
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 29
               

               Conread position:
               4-371
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               87, 28
               

               Conread position:
               5-374
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 59
               

               Conread position:
               15-407
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               283
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               20, 39
               

               Conread position:
               21-374
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               65, 38
               

               Conread position:
               32-383
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 77
               

               Conread position:
               39-368
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 26
               

               Conread position:
               76-263
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               75, 46
               

               Conread position:
               113-373
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               20, 29
               

               Conread position:
               113-382
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 36
               

               Conread position:
               114-278
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 53
               

               Conread position:
               114-370
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               136-372
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               15, 30
               

               Conread position:
               141-337
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               121, 7
               

               Conread position:
               141-372
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               144-374
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               7, 23
               

               Conread position:
               149-368
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               81, 16
               

               Conread position:
               154-382
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               44, 10
               

               Conread position:
               167-373
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               33, 51
               

               Conread position:
               167-374
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 176
               

               Conread position:
               168-372
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 64
               

               Conread position:
               168-372
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               168-396
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               189, 70
               

               Conread position:
               180-388
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               186-335
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               99, 7
               

               Conread position:
               230-390
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               380-840
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 153
               

               Conread position:
               414-620
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               125, 11
               

               Conread position:
               414-805
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               113, 75
               

               Conread position:
               414-832
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 6
               

               Conread position:
               416-806
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               39, 183
               

               Conread position:
               420-832
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               283
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               159, 38
               

               Conread position:
               421-835
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               278
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               80, 109
               

               Conread position:
               422-832
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               283
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               75, 306
               

               Conread position:
               428-830
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               261
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               439-811
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               9, 226
               

               Conread position:
               447-832
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               87, 35
               

               Conread position:
               450-835
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               269
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               129, 48
               

               Conread position:
               474-801
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               65, 139
               

               Conread position:
               502-832
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               543-802
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               546-800
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               548-832
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 7
               

               Conread position:
               564-827
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               82, 76
               

               Conread position:
               566-831
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               52, 77
               

               Conread position:
               579-804
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               170, 121
               

               Conread position:
               580-816
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               108, 55
               

               Conread position:
               624-832
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               63, 54
               

               Conread position:
               653-835
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               661-830
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               690-832
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               25, 55
               

               Conread position:
               690-832
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 36
               
Show alignments to all cow chromosomes.