Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-250
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               90, 29
               

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               3-369
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               302, 55
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               64, 125
               

               Conread position:
               3-373
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 63
               

               Conread position:
               3-374
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 30
               

               Conread position:
               3-374
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 56
               

               Conread position:
               3-374
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 30
               

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               269
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               88, 61
               

               Conread position:
               4-374
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 32
               

               Conread position:
               32-383
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               60, 32
               

               Conread position:
               50-335
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               217
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               31, 5
               

               Conread position:
               51-335
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               40, 13
               

               Conread position:
               51-367
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 14
               

               Conread position:
               51-370
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 14
               

               Conread position:
               51-373
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               41, 8
               

               Conread position:
               51-393
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               96-374
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               9, 72
               

               Conread position:
               110-372
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               120, 6
               

               Conread position:
               113-372
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               113-372
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               36, 53
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 54
               

               Conread position:
               114-330
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               114-330
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               117-374
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               118-383
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               33, 150
               

               Conread position:
               122-383
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               79, 13
               

               Conread position:
               144-373
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               53, 21
               

               Conread position:
               146-368
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 19
               

               Conread position:
               167-374
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               31, 176
               

               Conread position:
               168-356
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               168-363
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               29, 186
               

               Conread position:
               168-368
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               168-371
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               171, 109
               

               Conread position:
               168-383
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               59, 112
               

               Conread position:
               169-371
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               7, 62
               

               Conread position:
               175-372
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               181-373
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               17, 168
               

               Conread position:
               181-374
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               213-377
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               45, 34
               

               Conread position:
               386-832
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               118, 20
               

               Conread position:
               393-729
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               107, 20
               

               Conread position:
               395-805
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               143, 15
               

               Conread position:
               414-733
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               216
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               82, 7
               

               Conread position:
               415-775
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               90, 13
               

               Conread position:
               415-835
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 69
               

               Conread position:
               423-835
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 283
               

               Conread position:
               426-835
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               287
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               75, 95
               

               Conread position:
               428-835
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               274
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               430-808
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               71, 161
               

               Conread position:
               430-835
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               73, 111
               

               Conread position:
               432-832
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               438-836
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 60
               

               Conread position:
               446-818
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               261
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               121, 13
               

               Conread position:
               448-832
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               451-676
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               116, 31
               

               Conread position:
               453-832
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               457-832
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               249
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               43, 108
               

               Conread position:
               459-828
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               108, 68
               

               Conread position:
               532-832
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               39, 116
               

               Conread position:
               547-832
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               38, 25
               

               Conread position:
               547-836
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               22, 76
               

               Conread position:
               594-812
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               609-835
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               76, 80
               

               Conread position:
               690-835
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               130, 0
               
Show alignments to all cow chromosomes.