Cow genome map
Conread name: | Ss1.1-Pig4-TMW8039P19.5 |
Conread position: | 3-250 |
Cow position: | chr15:11759672-11759915 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 178 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 90, 29 |
Conread position: | 3-368 |
Cow position: | chr15:44997710-44998078 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 30 |
Conread position: | 3-369 |
Cow position: | chr15:34170694-34170350 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 239 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 302, 55 |
Conread position: | 3-372 |
Cow position: | chr15:32659836-32660203 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 260 |
Alignm E-value: | 7e-36 |
Alignm gaps (pig, cow): | 64, 125 |
Conread position: | 3-373 |
Cow position: | chr15:6447096-6447472 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 63 |
Conread position: | 3-374 |
Cow position: | chr15:15632521-15632885 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 30 |
Conread position: | 3-374 |
Cow position: | chr15:19728650-19729017 (view UCSC Genome Browser custom track) |
Alignm length: | 376 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 56 |
Conread position: | 3-374 |
Cow position: | chr15:51241024-51241397 (view UCSC Genome Browser custom track) |
Alignm length: | 385 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 30 |
Conread position: | 3-401 |
Cow position: | chr15:25466452-25466061 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 269 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 88, 61 |
Conread position: | 4-374 |
Cow position: | chr15:33611551-33611929 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 32 |
Conread position: | 32-383 |
Cow position: | chr15:45696260-45696614 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 247 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 60, 32 |
Conread position: | 50-335 |
Cow position: | chr15:14418393-14418111 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 217 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 31, 5 |
Conread position: | 51-335 |
Cow position: | chr15:49130108-49130383 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 209 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 40, 13 |
Conread position: | 51-367 |
Cow position: | chr15:1304610-1304295 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 229 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 14 |
Conread position: | 51-370 |
Cow position: | chr15:8439433-8439753 (view UCSC Genome Browser custom track) |
Alignm length: | 327 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 14 |
Conread position: | 51-373 |
Cow position: | chr15:18675539-18675859 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 231 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 41, 8 |
Conread position: | 51-393 |
Cow position: | chr15:50442268-50441924 (view UCSC Genome Browser custom track) |
Alignm length: | 352 |
Alignm identity: | 247 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 39, 27 |
Conread position: | 96-374 |
Cow position: | chr15:17189714-17189993 (view UCSC Genome Browser custom track) |
Alignm length: | 289 |
Alignm identity: | 197 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 9, 72 |
Conread position: | 110-372 |
Cow position: | chr15:42551672-42551412 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 194 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 120, 6 |
Conread position: | 113-372 |
Cow position: | chr15:24399800-24399545 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 186 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 28, 38 |
Conread position: | 113-372 |
Cow position: | chr15:45509574-45509834 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 188 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 36, 53 |
Conread position: | 113-374 |
Cow position: | chr15:16431993-16431731 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 201 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 49 |
Conread position: | 113-374 |
Cow position: | chr15:42660008-42659744 (view UCSC Genome Browser custom track) |
Alignm length: | 269 |
Alignm identity: | 203 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 54 |
Conread position: | 114-330 |
Cow position: | chr15:8438995-8439208 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 159 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 11, 38 |
Conread position: | 114-330 |
Cow position: | chr15:35449473-35449692 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 169 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 27, 38 |
Conread position: | 117-374 |
Cow position: | chr15:22548315-22548063 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 195 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 24, 50 |
Conread position: | 118-383 |
Cow position: | chr15:18212822-18213091 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 192 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 33, 150 |
Conread position: | 122-383 |
Cow position: | chr15:20128644-20128903 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 201 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 79, 13 |
Conread position: | 144-373 |
Cow position: | chr15:8949003-8949230 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 165 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 53, 21 |
Conread position: | 146-368 |
Cow position: | chr15:26171090-26170867 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 160 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 53, 19 |
Conread position: | 167-374 |
Cow position: | chr15:6309482-6309268 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 165 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 31, 176 |
Conread position: | 168-356 |
Cow position: | chr15:14470821-14471013 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 132 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 168-363 |
Cow position: | chr15:50547799-50547597 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 150 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 29, 186 |
Conread position: | 168-368 |
Cow position: | chr15:17005425-17005224 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 151 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 28, 106 |
Conread position: | 168-371 |
Cow position: | chr15:12799384-12799581 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 147 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 171, 109 |
Conread position: | 168-383 |
Cow position: | chr15:19934802-19934592 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 151 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 59, 112 |
Conread position: | 169-371 |
Cow position: | chr15:1216388-1216196 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 146 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 7, 62 |
Conread position: | 175-372 |
Cow position: | chr15:33464635-33464838 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 154 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 181-373 |
Cow position: | chr15:37755759-37755554 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 155 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 17, 168 |
Conread position: | 181-374 |
Cow position: | chr15:32432411-32432607 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 156 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 18, 63 |
Conread position: | 213-377 |
Cow position: | chr15:3054381-3054217 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 124 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 45, 34 |
Conread position: | 386-832 |
Cow position: | chr15:22615226-22614786 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 293 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 118, 20 |
Conread position: | 393-729 |
Cow position: | chr15:41001403-41001075 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 215 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 107, 20 |
Conread position: | 395-805 |
Cow position: | chr15:41474501-41474108 (view UCSC Genome Browser custom track) |
Alignm length: | 413 |
Alignm identity: | 263 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 143, 15 |
Conread position: | 414-733 |
Cow position: | chr15:2417986-2417664 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 216 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 82, 7 |
Conread position: | 415-775 |
Cow position: | chr15:10559971-10560335 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 237 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 90, 13 |
Conread position: | 415-835 |
Cow position: | chr15:9506969-9507380 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 108, 69 |
Conread position: | 423-835 |
Cow position: | chr15:46305082-46305496 (view UCSC Genome Browser custom track) |
Alignm length: | 417 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 142, 283 |
Conread position: | 426-835 |
Cow position: | chr15:26219480-26219055 (view UCSC Genome Browser custom track) |
Alignm length: | 437 |
Alignm identity: | 287 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 75, 95 |
Conread position: | 428-835 |
Cow position: | chr15:26435855-26435447 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 274 |
Alignm E-value: | 9e-38 |
Alignm gaps (pig, cow): | 37, 22 |
Conread position: | 430-808 |
Cow position: | chr15:28555583-28555946 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 250 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 71, 161 |
Conread position: | 430-835 |
Cow position: | chr15:41920281-41920711 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 285 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 73, 111 |
Conread position: | 432-832 |
Cow position: | chr15:5901119-5901522 (view UCSC Genome Browser custom track) |
Alignm length: | 415 |
Alignm identity: | 268 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 22, 95 |
Conread position: | 438-836 |
Cow position: | chr15:1810467-1810073 (view UCSC Genome Browser custom track) |
Alignm length: | 410 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 128, 60 |
Conread position: | 446-818 |
Cow position: | chr15:38123598-38123234 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 261 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 121, 13 |
Conread position: | 448-832 |
Cow position: | chr15:26944599-26944978 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 259 |
Alignm E-value: | 5e-33 |
Alignm gaps (pig, cow): | 53, 77 |
Conread position: | 451-676 |
Cow position: | chr15:6376611-6376830 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 157 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 116, 31 |
Conread position: | 453-832 |
Cow position: | chr15:23551630-23551999 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 262 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 48, 69 |
Conread position: | 457-832 |
Cow position: | chr15:16510950-16511314 (view UCSC Genome Browser custom track) |
Alignm length: | 383 |
Alignm identity: | 249 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 43, 108 |
Conread position: | 459-828 |
Cow position: | chr15:37854787-37854430 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 261 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 108, 68 |
Conread position: | 532-832 |
Cow position: | chr15:6858143-6857837 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 207 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 39, 116 |
Conread position: | 547-832 |
Cow position: | chr15:35507133-35507418 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 206 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 38, 25 |
Conread position: | 547-836 |
Cow position: | chr15:30457819-30458096 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 214 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 22, 76 |
Conread position: | 594-812 |
Cow position: | chr15:24490675-24490456 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 156 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 66, 21 |
Conread position: | 609-835 |
Cow position: | chr15:2057428-2057208 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 158 |
Alignm E-value: | 6e-24 |
Alignm gaps (pig, cow): | 76, 80 |
Conread position: | 690-835 |
Cow position: | chr15:44508898-44508754 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 106 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 130, 0 |
Show alignments to all cow chromosomes.