Cow genome map
Conread name: | Ss1.1-Pig4-TMW8039P19.5 |
Conread position: | 1-374 |
Cow position: | chr16:33435506-33435871 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 57 |
Conread position: | 3-367 |
Cow position: | chr16:33377608-33377254 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 262 |
Alignm E-value: | 2.00386e-43 |
Alignm gaps (pig, cow): | 86, 61 |
Conread position: | 3-368 |
Cow position: | chr16:10669623-10669258 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 51 |
Conread position: | 3-372 |
Cow position: | chr16:571574-571213 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 266 |
Alignm E-value: | 6.02558e-44 |
Alignm gaps (pig, cow): | 80, 61 |
Conread position: | 3-382 |
Cow position: | chr16:48895644-48896018 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 62 |
Conread position: | 3-383 |
Cow position: | chr16:44460292-44460673 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 272 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 130, 61 |
Conread position: | 3-387 |
Cow position: | chr16:412053-412427 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 62 |
Conread position: | 3-387 |
Cow position: | chr16:13513211-13513599 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 274 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 61 |
Conread position: | 3-401 |
Cow position: | chr16:40521858-40522253 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 280 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 61 |
Conread position: | 3-405 |
Cow position: | chr16:37100601-37100992 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 283 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 89, 61 |
Conread position: | 4-374 |
Cow position: | chr16:15258023-15258394 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 221 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 82, 55 |
Conread position: | 9-364 |
Cow position: | chr16:12093137-12092797 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 248 |
Alignm E-value: | 4.00001e-40 |
Alignm gaps (pig, cow): | 82, 7 |
Conread position: | 20-374 |
Cow position: | chr16:17162981-17162627 (view UCSC Genome Browser custom track) |
Alignm length: | 364 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 13 |
Conread position: | 92-362 |
Cow position: | chr16:203405-203138 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 186 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 18, 36 |
Conread position: | 106-407 |
Cow position: | chr16:49910805-49911107 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 212 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 46, 61 |
Conread position: | 113-335 |
Cow position: | chr16:14182776-14182559 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 167 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 20, 24 |
Conread position: | 113-369 |
Cow position: | chr16:33531456-33531208 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 187 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 38, 54 |
Conread position: | 113-373 |
Cow position: | chr16:10179030-10178770 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 195 |
Alignm E-value: | 4e-39 |
Alignm gaps (pig, cow): | 37, 9 |
Conread position: | 113-374 |
Cow position: | chr16:43861045-43861309 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 205 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 37 |
Conread position: | 113-383 |
Cow position: | chr16:21725787-21726047 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 193 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 29, 40 |
Conread position: | 113-389 |
Cow position: | chr16:3160003-3160275 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 192 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 20, 77 |
Conread position: | 113-399 |
Cow position: | chr16:11484603-11484884 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 210 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 37, 54 |
Conread position: | 113-401 |
Cow position: | chr16:33439358-33439660 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 224 |
Alignm E-value: | 3e-38 |
Alignm gaps (pig, cow): | 37, 54 |
Conread position: | 114-372 |
Cow position: | chr16:4141494-4141224 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 194 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 19, 37 |
Conread position: | 114-372 |
Cow position: | chr16:55127170-55126916 (view UCSC Genome Browser custom track) |
Alignm length: | 268 |
Alignm identity: | 183 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 9, 39 |
Conread position: | 138-373 |
Cow position: | chr16:40501800-40501566 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 29 |
Conread position: | 141-374 |
Cow position: | chr16:35447276-35447500 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 166 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 89, 7 |
Conread position: | 150-373 |
Cow position: | chr16:56209796-56209572 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 174 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 79, 15 |
Conread position: | 151-401 |
Cow position: | chr16:47366378-47366615 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 178 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 73, 14 |
Conread position: | 167-280 |
Cow position: | chr16:19262989-19263104 (view UCSC Genome Browser custom track) |
Alignm length: | 116 |
Alignm identity: | 99 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 167-373 |
Cow position: | chr16:1631895-1631690 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 162 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 34, 52 |
Conread position: | 167-374 |
Cow position: | chr16:52619327-52619540 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 166 |
Alignm E-value: | 1e-39 |
Alignm gaps (pig, cow): | 35, 175 |
Conread position: | 167-383 |
Cow position: | chr16:35415448-35415668 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 171 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 36, 143 |
Conread position: | 168-368 |
Cow position: | chr16:16076334-16076530 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 143 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 29, 70 |
Conread position: | 168-368 |
Cow position: | chr16:16087970-16088166 (view UCSC Genome Browser custom track) |
Alignm length: | 203 |
Alignm identity: | 145 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 29, 70 |
Conread position: | 168-368 |
Cow position: | chr16:35291231-35291432 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 155 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 168-372 |
Cow position: | chr16:7433560-7433758 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 150 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 171, 108 |
Conread position: | 168-373 |
Cow position: | chr16:10933405-10933192 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 158 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 168-374 |
Cow position: | chr16:22243793-22243581 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 163 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 31, 174 |
Conread position: | 168-383 |
Cow position: | chr16:24586805-24587021 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 166 |
Alignm E-value: | 8e-36 |
Alignm gaps (pig, cow): | 31, 142 |
Conread position: | 175-281 |
Cow position: | chr16:28068201-28068309 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 90 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 175-335 |
Cow position: | chr16:3139827-3139991 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 132 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 21, 98 |
Conread position: | 182-364 |
Cow position: | chr16:12004639-12004456 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 137 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 182-368 |
Cow position: | chr16:13877816-13878012 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 152 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 19, 164 |
Conread position: | 182-370 |
Cow position: | chr16:33874791-33874984 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 145 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 14, 180 |
Conread position: | 190-373 |
Cow position: | chr16:50508069-50508253 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 142 |
Alignm E-value: | 9e-37 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 223-391 |
Cow position: | chr16:35445910-35446079 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 134 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 32, 160 |
Conread position: | 230-369 |
Cow position: | chr16:16724781-16724921 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 107 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 415-837 |
Cow position: | chr16:23361588-23361169 (view UCSC Genome Browser custom track) |
Alignm length: | 433 |
Alignm identity: | 270 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 86, 12 |
Conread position: | 416-641 |
Cow position: | chr16:35446314-35446086 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 159 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 82, 104 |
Conread position: | 418-812 |
Cow position: | chr16:33288751-33289139 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 154, 49 |
Conread position: | 420-817 |
Cow position: | chr16:7909056-7909445 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 84 |
Conread position: | 422-817 |
Cow position: | chr16:55431154-55431538 (view UCSC Genome Browser custom track) |
Alignm length: | 402 |
Alignm identity: | 269 |
Alignm E-value: | 1e-37 |
Alignm gaps (pig, cow): | 79, 100 |
Conread position: | 422-835 |
Cow position: | chr16:14412626-14413034 (view UCSC Genome Browser custom track) |
Alignm length: | 418 |
Alignm identity: | 302 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 117, 74 |
Conread position: | 424-835 |
Cow position: | chr16:51498398-51498798 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 284 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 144, 69 |
Conread position: | 428-656 |
Cow position: | chr16:7707801-7708037 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 158 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 430-816 |
Cow position: | chr16:1980915-1980544 (view UCSC Genome Browser custom track) |
Alignm length: | 399 |
Alignm identity: | 268 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 16, 53 |
Conread position: | 430-830 |
Cow position: | chr16:13539905-13540308 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 257, 161 |
Conread position: | 430-835 |
Cow position: | chr16:42964301-42963897 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 270 |
Alignm E-value: | 9.99967e-42 |
Alignm gaps (pig, cow): | 137, 20 |
Conread position: | 450-678 |
Cow position: | chr16:39244102-39243884 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 162 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 115, 70 |
Conread position: | 450-742 |
Cow position: | chr16:50594330-50594044 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 200 |
Alignm E-value: | 7e-35 |
Alignm gaps (pig, cow): | 267, 70 |
Conread position: | 456-835 |
Cow position: | chr16:53686430-53686058 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 261 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 45, 142 |
Conread position: | 460-835 |
Cow position: | chr16:28271035-28270669 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 253 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 69, 87 |
Conread position: | 469-765 |
Cow position: | chr16:24781069-24780765 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 204 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 96, 62 |
Conread position: | 470-829 |
Cow position: | chr16:3973145-3972798 (view UCSC Genome Browser custom track) |
Alignm length: | 363 |
Alignm identity: | 237 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 247, 77 |
Conread position: | 516-831 |
Cow position: | chr16:11434052-11434366 (view UCSC Genome Browser custom track) |
Alignm length: | 322 |
Alignm identity: | 214 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 51, 31 |
Conread position: | 538-811 |
Cow position: | chr16:39241227-39240954 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 182 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 108, 42 |
Conread position: | 538-835 |
Cow position: | chr16:47553441-47553730 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 206 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 27, 43 |
Conread position: | 546-805 |
Cow position: | chr16:53768861-53768609 (view UCSC Genome Browser custom track) |
Alignm length: | 265 |
Alignm identity: | 183 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 24, 42 |
Conread position: | 549-847 |
Cow position: | chr16:13744944-13745236 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 201 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 17, 98 |
Conread position: | 560-812 |
Cow position: | chr16:32505850-32506089 (view UCSC Genome Browser custom track) |
Alignm length: | 255 |
Alignm identity: | 176 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 127, 28 |
Conread position: | 564-797 |
Cow position: | chr16:39466323-39466085 (view UCSC Genome Browser custom track) |
Alignm length: | 241 |
Alignm identity: | 167 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 43, 82 |
Conread position: | 565-832 |
Cow position: | chr16:5475094-5475359 (view UCSC Genome Browser custom track) |
Alignm length: | 273 |
Alignm identity: | 188 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 35, 136 |
Conread position: | 566-835 |
Cow position: | chr16:31212208-31211947 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 187 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 45, 17 |
Conread position: | 570-832 |
Cow position: | chr16:36975380-36975639 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 186 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 76, 29 |
Conread position: | 583-830 |
Cow position: | chr16:56178550-56178796 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 167 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 160, 114 |
Conread position: | 585-832 |
Cow position: | chr16:21783609-21783859 (view UCSC Genome Browser custom track) |
Alignm length: | 258 |
Alignm identity: | 176 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 26, 62 |
Conread position: | 591-835 |
Cow position: | chr16:35051926-35052162 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 171 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 60, 50 |
Conread position: | 611-832 |
Cow position: | chr16:34019957-34019738 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 160 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 77, 48 |
Conread position: | 612-813 |
Cow position: | chr16:33658256-33658054 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 137 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 38, 135 |
Conread position: | 620-831 |
Cow position: | chr16:15948171-15948379 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 151 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 68, 74 |
Conread position: | 627-811 |
Cow position: | chr16:33901751-33901557 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 143 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 59, 126 |
Conread position: | 648-808 |
Cow position: | chr16:56093034-56092872 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 122 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 39, 98 |
Conread position: | 685-832 |
Cow position: | chr16:39243256-39243107 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 115 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 21, 60 |
Conread position: | 685-835 |
Cow position: | chr16:28002750-28002599 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 111 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 710-832 |
Cow position: | chr16:50807313-50807190 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 95 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.