Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               1-374
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 57
               

               Conread position:
               3-367
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               262
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               86, 61
               

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 51
               

               Conread position:
               3-372
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               266
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               80, 61
               

               Conread position:
               3-382
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 62
               

               Conread position:
               3-383
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 61
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 62
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               3-401
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               3-405
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 61
               

               Conread position:
               4-374
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               82, 55
               

               Conread position:
               9-364
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               248
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               82, 7
               

               Conread position:
               20-374
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 13
               

               Conread position:
               92-362
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               18, 36
               

               Conread position:
               106-407
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               46, 61
               

               Conread position:
               113-335
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               20, 24
               

               Conread position:
               113-369
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               113-373
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               37, 9
               

               Conread position:
               113-374
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 37
               

               Conread position:
               113-383
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               29, 40
               

               Conread position:
               113-389
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               20, 77
               

               Conread position:
               113-399
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               113-401
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               114-372
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               114-372
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               9, 39
               

               Conread position:
               138-373
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 29
               

               Conread position:
               141-374
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               89, 7
               

               Conread position:
               150-373
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               174
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               79, 15
               

               Conread position:
               151-401
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               167-280
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               167-373
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               162
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               34, 52
               

               Conread position:
               167-374
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               35, 175
               

               Conread position:
               167-383
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               36, 143
               

               Conread position:
               168-368
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               168-368
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               29, 70
               

               Conread position:
               168-368
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               155
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               168-372
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               171, 108
               

               Conread position:
               168-373
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               168-374
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               31, 174
               

               Conread position:
               168-383
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               31, 142
               

               Conread position:
               175-281
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               175-335
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 98
               

               Conread position:
               182-364
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               182-368
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               19, 164
               

               Conread position:
               182-370
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               14, 180
               

               Conread position:
               190-373
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               223-391
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               32, 160
               

               Conread position:
               230-369
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               415-837
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 12
               

               Conread position:
               416-641
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               159
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               82, 104
               

               Conread position:
               418-812
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 49
               

               Conread position:
               420-817
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 84
               

               Conread position:
               422-817
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               79, 100
               

               Conread position:
               422-835
               

               Cow position:
               
               

               Alignm length:
               418
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 74
               

               Conread position:
               424-835
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               284
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               144, 69
               

               Conread position:
               428-656
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               430-816
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               268
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               16, 53
               

               Conread position:
               430-830
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 161
               

               Conread position:
               430-835
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               270
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               137, 20
               

               Conread position:
               450-678
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               115, 70
               

               Conread position:
               450-742
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               267, 70
               

               Conread position:
               456-835
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               45, 142
               

               Conread position:
               460-835
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               69, 87
               

               Conread position:
               469-765
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               96, 62
               

               Conread position:
               470-829
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               247, 77
               

               Conread position:
               516-831
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               51, 31
               

               Conread position:
               538-811
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               108, 42
               

               Conread position:
               538-835
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               27, 43
               

               Conread position:
               546-805
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 42
               

               Conread position:
               549-847
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 98
               

               Conread position:
               560-812
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               127, 28
               

               Conread position:
               564-797
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               43, 82
               

               Conread position:
               565-832
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               35, 136
               

               Conread position:
               566-835
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               45, 17
               

               Conread position:
               570-832
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               583-830
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               160, 114
               

               Conread position:
               585-832
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               26, 62
               

               Conread position:
               591-835
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               60, 50
               

               Conread position:
               611-832
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               77, 48
               

               Conread position:
               612-813
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               38, 135
               

               Conread position:
               620-831
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               68, 74
               

               Conread position:
               627-811
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               59, 126
               

               Conread position:
               648-808
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               39, 98
               

               Conread position:
               685-832
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               21, 60
               

               Conread position:
               685-835
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               710-832
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               37, 0
               
Show alignments to all cow chromosomes.