Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8039P19.5
        

               Conread position:
               3-269
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               89, 30
               

               Conread position:
               3-370
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               3-382
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 61
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               3-387
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 30
               

               Conread position:
               15-362
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               77, 49
               

               Conread position:
               22-374
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 43
               

               Conread position:
               34-406
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 31
               

               Conread position:
               51-388
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 14
               

               Conread position:
               57-373
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 111
               

               Conread position:
               110-355
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               37, 6
               

               Conread position:
               112-401
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               113-301
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               20, 53
               

               Conread position:
               113-323
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               113-329
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               113-335
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               113-358
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               21, 33
               

               Conread position:
               113-387
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               208
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               114-394
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               179
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               35, 53
               

               Conread position:
               115-357
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               125-368
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               150-373
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               51, 14
               

               Conread position:
               150-373
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 15
               

               Conread position:
               161-321
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 17
               

               Conread position:
               167-374
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               167-383
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               31, 100
               

               Conread position:
               168-364
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               56, 31
               

               Conread position:
               170-344
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               60, 16
               

               Conread position:
               182-364
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 51
               

               Conread position:
               185-390
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               191-355
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               39, 60
               

               Conread position:
               211-355
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               250-383
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               394-818
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               290
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               23, 208
               

               Conread position:
               398-711
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               160, 21
               

               Conread position:
               415-738
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               272, 5
               

               Conread position:
               417-835
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               281
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               84, 102
               

               Conread position:
               421-806
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               263
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               118, 136
               

               Conread position:
               428-801
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               21, 26
               

               Conread position:
               428-828
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               262
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               73, 36
               

               Conread position:
               438-815
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               238
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               13, 108
               

               Conread position:
               439-811
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 14
               

               Conread position:
               440-816
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               96, 118
               

               Conread position:
               440-828
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               76, 81
               

               Conread position:
               447-657
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               155, 77
               

               Conread position:
               447-835
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               63, 112
               

               Conread position:
               462-832
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               254
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               39, 59
               

               Conread position:
               467-703
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               34, 82
               

               Conread position:
               477-791
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               479-832
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               518-886
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 104
               

               Conread position:
               538-829
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 190
               

               Conread position:
               538-832
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               29, 39
               

               Conread position:
               547-832
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               20, 120
               

               Conread position:
               612-835
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               75, 31
               

               Conread position:
               624-832
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               26, 58
               
Show alignments to all cow chromosomes.